Dataset | Set_02_ATM_minus_versus_BT_ATM_minus.phenotype_ATM_minus_versus_BT_ATM_minus.cls #ATM_minus_versus_BT_ATM_minus.phenotype_ATM_minus_versus_BT_ATM_minus.cls #ATM_minus_versus_BT_ATM_minus_repos |
Phenotype | phenotype_ATM_minus_versus_BT_ATM_minus.cls#ATM_minus_versus_BT_ATM_minus_repos |
Upregulated in class | BT_ATM_minus |
GeneSet | V$SRF_Q5_01 |
Enrichment Score (ES) | -0.47519895 |
Normalized Enrichment Score (NES) | -1.6228483 |
Nominal p-value | 0.001754386 |
FDR q-value | 0.19233434 |
FWER p-Value | 0.438 |
PROBE | DESCRIPTION (from dataset) | GENE SYMBOL | GENE_TITLE | RANK IN GENE LIST | RANK METRIC SCORE | RUNNING ES | CORE ENRICHMENT | |
---|---|---|---|---|---|---|---|---|
1 | ATF4 | 1438992_x_at 1439258_at 1448135_at | 301 | 2.015 | 0.0064 | No | ||
2 | CKM | 1417614_at | 406 | 1.806 | 0.0198 | No | ||
3 | SERTAD4 | 1454877_at | 436 | 1.753 | 0.0360 | No | ||
4 | CSDA | 1435800_a_at 1451012_a_at | 609 | 1.530 | 0.0435 | No | ||
5 | RBBP7 | 1415775_at 1456227_x_at | 690 | 1.450 | 0.0544 | No | ||
6 | DSTN | 1417124_at | 837 | 1.304 | 0.0608 | No | ||
7 | RSU1 | 1419259_at | 880 | 1.269 | 0.0716 | No | ||
8 | LCP1 | 1415983_at 1448160_at | 1051 | 1.147 | 0.0753 | No | ||
9 | H3F3A | 1423263_at 1442087_at | 1620 | 0.848 | 0.0577 | No | ||
10 | PELI2 | 1419006_s_at 1436966_at 1437181_at | 1669 | 0.834 | 0.0639 | No | ||
11 | NR2F1 | 1418157_at 1422412_x_at | 2159 | 0.668 | 0.0481 | No | ||
12 | ACTR3 | 1426392_a_at 1434968_a_at 1452051_at | 2267 | 0.638 | 0.0496 | No | ||
13 | IGF2AS | 1427394_at | 2711 | 0.533 | 0.0346 | No | ||
14 | FOSB | 1422134_at | 2811 | 0.516 | 0.0352 | No | ||
15 | COL1A1 | 1423669_at 1455494_at | 3018 | 0.482 | 0.0306 | No | ||
16 | ATF3 | 1449363_at | 3055 | 0.476 | 0.0337 | No | ||
17 | CTNND1 | 1422450_at 1437448_s_at 1445830_at | 3200 | 0.456 | 0.0317 | No | ||
18 | EMILIN2 | 1435264_at | 3273 | 0.444 | 0.0328 | No | ||
19 | TPM3 | 1427260_a_at 1427567_a_at 1436958_x_at 1449996_a_at 1449997_at | 3296 | 0.442 | 0.0362 | No | ||
20 | PPARG | 1420715_a_at | 3510 | 0.415 | 0.0306 | No | ||
21 | RHOJ | 1418892_at 1444982_at | 3556 | 0.408 | 0.0326 | No | ||
22 | SLC16A6 | 1417884_at | 3618 | 0.401 | 0.0339 | No | ||
23 | TANK | 1421640_a_at 1441513_at 1459668_at | 3624 | 0.401 | 0.0377 | No | ||
24 | SVIL | 1427662_at 1460694_s_at 1460735_at | 3666 | 0.396 | 0.0398 | No | ||
25 | ELAVL4 | 1428741_at 1450258_a_at 1452894_at 1457399_at | 3801 | 0.382 | 0.0374 | No | ||
26 | FGF8 | 1451882_a_at | 3864 | 0.375 | 0.0383 | No | ||
27 | SLC2A4 | 1415958_at 1415959_at | 3939 | 0.369 | 0.0387 | No | ||
28 | NFATC4 | 1423380_s_at 1432821_at 1454369_a_at | 4000 | 0.365 | 0.0396 | No | ||
29 | ACTN1 | 1427385_s_at 1428585_at 1452415_at | 4153 | 0.351 | 0.0361 | No | ||
30 | PDLIM7 | 1417959_at 1428319_at 1443785_x_at | 4374 | 0.333 | 0.0293 | No | ||
31 | NPR3 | 1435184_at 1448024_at 1450286_at | 4909 | 0.297 | 0.0078 | No | ||
32 | GPR20 | 1440021_at | 4941 | 0.295 | 0.0093 | No | ||
33 | GADD45G | 1453851_a_at | 5123 | 0.284 | 0.0038 | No | ||
34 | TRDN | 1426134_at 1426142_a_at 1426143_at 1426144_x_at 1451801_at 1451940_x_at | 5313 | 0.271 | -0.0021 | No | ||
35 | CNN1 | 1417917_at | 5471 | 0.261 | -0.0067 | No | ||
36 | STARD13 | 1452604_at | 5759 | 0.243 | -0.0175 | No | ||
37 | NKX2-2 | 1421112_at | 5764 | 0.242 | -0.0152 | No | ||
38 | LPP | 1425673_at 1436714_at 1437235_x_at 1438271_at 1440167_s_at 1454899_at 1455314_at | 5876 | 0.236 | -0.0180 | No | ||
39 | ADAMTSL1 | 1430313_at | 5881 | 0.236 | -0.0158 | No | ||
40 | CFL1 | 1448346_at 1455138_x_at | 6120 | 0.223 | -0.0245 | No | ||
41 | MAPK14 | 1416703_at 1416704_at 1426104_at 1442364_at 1451927_a_at 1459617_at | 6350 | 0.212 | -0.0329 | No | ||
42 | FLNC | 1424063_at 1447812_x_at 1449073_at | 6650 | 0.198 | -0.0446 | No | ||
43 | MYL9 | 1452670_at | 6675 | 0.197 | -0.0438 | No | ||
44 | GGN | 1445278_at | 6730 | 0.193 | -0.0443 | No | ||
45 | TRIM3 | 1451663_a_at | 6743 | 0.192 | -0.0429 | No | ||
46 | HOXB5 | 1418415_at | 6755 | 0.192 | -0.0415 | No | ||
47 | COL23A1 | 1429209_at 1429210_at 1440911_at | 6812 | 0.189 | -0.0422 | No | ||
48 | PLCB3 | 1448661_at | 7047 | 0.180 | -0.0511 | No | ||
49 | MAPKAPK2 | 1426648_at | 7123 | 0.176 | -0.0528 | No | ||
50 | FGF7 | 1422243_at 1438405_at | 7202 | 0.172 | -0.0547 | No | ||
51 | KCNA1 | 1417416_at 1437230_at 1442413_at 1455785_at | 7501 | 0.160 | -0.0667 | No | ||
52 | FGF17 | 1421523_at 1456239_at | 7707 | 0.151 | -0.0747 | No | ||
53 | LRRTM4 | 1437214_at 1455937_at | 8163 | 0.134 | -0.0942 | No | ||
54 | MYL7 | 1449071_at | 8343 | 0.128 | -0.1012 | No | ||
55 | RARB | 1454906_at | 8366 | 0.127 | -0.1009 | No | ||
56 | TAGLN | 1423505_at | 8436 | 0.124 | -0.1028 | No | ||
57 | RIMS1 | 1435667_at 1438305_at 1444393_at | 8514 | 0.121 | -0.1052 | No | ||
58 | CALD1 | 1424768_at 1424769_s_at 1424770_at 1433146_at 1433147_at 1458057_at | 8907 | 0.108 | -0.1221 | No | ||
59 | DIXDC1 | 1425256_a_at 1435207_at 1443957_at 1444395_at | 9229 | 0.096 | -0.1359 | No | ||
60 | TIMP3 | 1419088_at 1419089_at 1449334_at 1449335_at | 9230 | 0.096 | -0.1349 | No | ||
61 | NPAS2 | 1421036_at 1421037_at | 9236 | 0.096 | -0.1342 | No | ||
62 | SRF | 1418255_s_at 1418256_at | 9470 | 0.088 | -0.1440 | No | ||
63 | UBE2H | 1418631_at 1418632_at 1428791_at 1438971_x_at 1447374_at 1459930_at | 9676 | 0.082 | -0.1526 | No | ||
64 | RAI2 | 1452358_at | 9692 | 0.081 | -0.1525 | No | ||
65 | NPPA | 1456062_at | 9843 | 0.076 | -0.1586 | No | ||
66 | MITF | 1422025_at 1455214_at | 9875 | 0.075 | -0.1593 | No | ||
67 | OTX1 | 1437601_at | 9922 | 0.074 | -0.1607 | No | ||
68 | ASPA | 1418472_at | 10297 | 0.061 | -0.1772 | No | ||
69 | HOXC4 | 1422870_at | 10313 | 0.060 | -0.1773 | No | ||
70 | PLN | 1423359_at 1450952_at 1460332_at | 10388 | 0.058 | -0.1801 | No | ||
71 | SRD5A2 | 1422960_at | 10567 | 0.051 | -0.1878 | No | ||
72 | CXCL5 | 1419728_at | 10590 | 0.051 | -0.1883 | No | ||
73 | ITGB6 | 1422983_at 1432281_a_at | 10728 | 0.046 | -0.1942 | No | ||
74 | MID1 | 1422055_at 1438239_at 1441929_at 1443666_at | 11209 | 0.030 | -0.2159 | No | ||
75 | CALN1 | 1425846_a_at | 11260 | 0.028 | -0.2179 | No | ||
76 | SLC4A3 | 1418485_at 1453687_at | 11574 | 0.018 | -0.2321 | No | ||
77 | CRH | 1457984_at | 11628 | 0.016 | -0.2344 | No | ||
78 | ASB2 | 1428444_at 1436259_at | 11713 | 0.013 | -0.2381 | No | ||
79 | ERBB2IP | 1428011_a_at 1439079_a_at 1439080_at 1439638_at 1440573_at | 11757 | 0.012 | -0.2400 | No | ||
80 | CHST8 | 1428977_at | 11854 | 0.008 | -0.2443 | No | ||
81 | EEF1B2 | 1448252_a_at | 11989 | 0.004 | -0.2505 | No | ||
82 | HOXB4 | 1451761_at 1460379_at | 12097 | -0.000 | -0.2554 | No | ||
83 | DLL1 | 1419204_at | 12454 | -0.014 | -0.2716 | No | ||
84 | IL17B | 1431693_a_at | 12557 | -0.018 | -0.2761 | No | ||
85 | EGR3 | 1421486_at 1436329_at | 12603 | -0.020 | -0.2780 | No | ||
86 | CA3 | 1430584_s_at 1449434_at 1453588_at 1460256_at | 12611 | -0.020 | -0.2781 | No | ||
87 | ITGB8 | 1436223_at | 12767 | -0.025 | -0.2850 | No | ||
88 | PPP2R3A | 1455198_a_at | 12886 | -0.029 | -0.2901 | No | ||
89 | NRAS | 1422688_a_at 1454060_a_at | 12913 | -0.030 | -0.2910 | No | ||
90 | PPAP2B | 1429514_at 1446850_at 1448908_at | 12982 | -0.033 | -0.2938 | No | ||
91 | EFHD1 | 1448507_at | 13116 | -0.038 | -0.2995 | No | ||
92 | WNT3 | 1450763_x_at | 13302 | -0.044 | -0.3076 | No | ||
93 | TLE3 | 1419654_at 1419655_at 1449554_at 1458512_at | 13319 | -0.045 | -0.3079 | No | ||
94 | ASXL2 | 1439063_at 1444754_at 1453295_at 1458366_at 1460597_at | 13437 | -0.050 | -0.3127 | No | ||
95 | TPM2 | 1419738_a_at 1419739_at 1425028_a_at 1449577_x_at | 14054 | -0.075 | -0.3403 | No | ||
96 | CORO1C | 1417752_at 1419911_at 1437721_at 1442972_at 1449660_s_at 1459169_at | 14088 | -0.077 | -0.3410 | No | ||
97 | ITGB1BP2 | 1423238_at | 14199 | -0.081 | -0.3453 | No | ||
98 | DVL3 | 1420457_at | 14313 | -0.086 | -0.3496 | No | ||
99 | SDPR | 1416778_at 1416779_at 1443832_s_at | 14422 | -0.091 | -0.3537 | No | ||
100 | PODN | 1435180_at | 14424 | -0.091 | -0.3528 | No | ||
101 | HOXC5 | 1439885_at 1450832_at 1456301_at | 14590 | -0.099 | -0.3594 | No | ||
102 | BNC2 | 1438861_at 1440593_at 1459132_at | 14638 | -0.101 | -0.3605 | No | ||
103 | HOXD10 | 1418606_at | 14688 | -0.103 | -0.3618 | No | ||
104 | MYH11 | 1418122_at 1448962_at | 14699 | -0.104 | -0.3612 | No | ||
105 | ABCA1 | 1421839_at 1421840_at 1450392_at | 15162 | -0.124 | -0.3812 | No | ||
106 | KRTCAP2 | 1417058_a_at 1417059_at | 15256 | -0.129 | -0.3841 | No | ||
107 | MRPS21 | 1422451_at | 15321 | -0.132 | -0.3858 | No | ||
108 | MYL6 | 1435041_at | 15368 | -0.134 | -0.3865 | No | ||
109 | MRGPRF | 1425894_at | 15443 | -0.139 | -0.3885 | No | ||
110 | SCOC | 1416267_at 1430999_a_at | 15671 | -0.151 | -0.3974 | No | ||
111 | MAP1A | 1460566_at | 15679 | -0.152 | -0.3962 | No | ||
112 | CNN2 | 1450981_at | 15715 | -0.154 | -0.3963 | No | ||
113 | TNMD | 1417979_at | 16018 | -0.171 | -0.4085 | No | ||
114 | ABR | 1433477_at | 16212 | -0.183 | -0.4155 | No | ||
115 | FOS | 1423100_at | 16233 | -0.185 | -0.4146 | No | ||
116 | BLOC1S1 | 1422614_s_at | 16755 | -0.221 | -0.4363 | No | ||
117 | VCL | 1416156_at 1416157_at 1445256_at | 16767 | -0.221 | -0.4346 | No | ||
118 | THRAP1 | 1436904_at 1438725_at 1444068_at 1446840_at 1453160_at 1453161_at | 16778 | -0.222 | -0.4328 | No | ||
119 | TRIM46 | 1460568_at | 16787 | -0.223 | -0.4309 | No | ||
120 | MLLT7 | 1422149_at | 16877 | -0.230 | -0.4327 | No | ||
121 | ARPC4 | 1423588_at 1423589_at | 17010 | -0.240 | -0.4364 | No | ||
122 | MYADM | 1423321_at 1439389_s_at | 17124 | -0.250 | -0.4391 | No | ||
123 | FOXE3 | 1422393_at | 17151 | -0.252 | -0.4377 | No | ||
124 | MYO1E | 1420159_at 1420160_s_at 1428509_at 1449753_at 1449941_at | 17313 | -0.265 | -0.4425 | No | ||
125 | PRKAB2 | 1435874_at 1435875_at 1442001_at | 17435 | -0.276 | -0.4453 | No | ||
126 | FGFRL1 | 1447878_s_at 1451912_a_at | 17642 | -0.298 | -0.4517 | No | ||
127 | KCNK3 | 1425341_at 1425342_a_at 1426058_a_at | 17775 | -0.313 | -0.4547 | No | ||
128 | CHD2 | 1444246_at 1445843_at | 17842 | -0.321 | -0.4545 | No | ||
129 | DGKG | 1419756_at 1431167_at 1449584_at | 17891 | -0.326 | -0.4534 | No | ||
130 | TGFB1I1 | 1418136_at | 18010 | -0.341 | -0.4554 | No | ||
131 | PPP1R12A | 1429487_at 1437734_at 1437735_at 1444762_at 1444834_at 1453163_at | 18017 | -0.342 | -0.4522 | No | ||
132 | SGK | 1416041_at | 18027 | -0.343 | -0.4492 | No | ||
133 | LDB1 | 1452024_a_at | 18101 | -0.351 | -0.4490 | No | ||
134 | SLC25A4 | 1424562_a_at 1424563_at 1434897_a_at 1455069_x_at | 18205 | -0.366 | -0.4501 | No | ||
135 | NRXN3 | 1419825_at 1431153_at 1432931_at 1433788_at 1438193_at 1439629_at 1442423_at 1444700_at 1456137_at 1460101_at | 18436 | -0.403 | -0.4566 | No | ||
136 | TAF5L | 1448195_at | 18500 | -0.413 | -0.4554 | No | ||
137 | PFN1 | 1449018_at | 18512 | -0.415 | -0.4517 | No | ||
138 | CACNA1B | 1425812_a_at 1436602_x_at 1439612_at 1460608_at | 18706 | -0.448 | -0.4561 | No | ||
139 | EML4 | 1429612_at 1447838_x_at | 18774 | -0.462 | -0.4545 | No | ||
140 | DUSP10 | 1417163_at 1417164_at | 18820 | -0.470 | -0.4519 | No | ||
141 | MYLK | 1425504_at 1425505_at 1425506_at | 18845 | -0.476 | -0.4482 | No | ||
142 | PICALM | 1441328_at 1443218_at 1446968_at 1451316_a_at 1455773_at | 18895 | -0.486 | -0.4455 | No | ||
143 | CASQ1 | 1422598_at | 19541 | -0.624 | -0.4689 | Yes | ||
144 | TADA3L | 1417467_a_at 1448719_at | 19549 | -0.626 | -0.4630 | Yes | ||
145 | PHF12 | 1434922_at 1453579_at | 19601 | -0.641 | -0.4589 | Yes | ||
146 | IER2 | 1416442_at | 19610 | -0.643 | -0.4528 | Yes | ||
147 | ACTG2 | 1422340_a_at | 19669 | -0.656 | -0.4489 | Yes | ||
148 | ACTA1 | 1427735_a_at | 19700 | -0.666 | -0.4436 | Yes | ||
149 | NR2F2 | 1416158_at 1416159_at 1416160_at 1431237_at 1444229_at | 19735 | -0.676 | -0.4383 | Yes | ||
150 | VASP | 1451097_at | 19786 | -0.691 | -0.4337 | Yes | ||
151 | MUS81 | 1431885_a_at 1450432_s_at | 19812 | -0.701 | -0.4278 | Yes | ||
152 | TAZ | 1416207_at 1453785_at | 19831 | -0.708 | -0.4215 | Yes | ||
153 | LRRFIP1 | 1433842_at 1437477_at 1448487_at | 19875 | -0.719 | -0.4163 | Yes | ||
154 | JMJD1A | 1426810_at | 19946 | -0.744 | -0.4120 | Yes | ||
155 | RUNDC1 | 1454829_at | 19983 | -0.757 | -0.4061 | Yes | ||
156 | FLNA | 1426677_at | 19992 | -0.758 | -0.3988 | Yes | ||
157 | H2AFX | 1416746_at | 20032 | -0.771 | -0.3929 | Yes | ||
158 | CSRP1 | 1425810_a_at 1425811_a_at | 20266 | -0.867 | -0.3949 | Yes | ||
159 | CFL2 | 1418066_at 1418067_at 1431432_at | 20311 | -0.887 | -0.3880 | Yes | ||
160 | FOXP2 | 1422014_at 1438231_at 1438232_at 1440108_at 1441365_at 1458191_at | 20486 | -0.969 | -0.3863 | Yes | ||
161 | CDC25B | 1421963_a_at | 20551 | -1.007 | -0.3791 | Yes | ||
162 | RERE | 1454670_at | 20719 | -1.135 | -0.3754 | Yes | ||
163 | GRK6 | 1437436_s_at 1450480_a_at 1451672_at | 20772 | -1.176 | -0.3659 | Yes | ||
164 | STAT5B | 1422102_a_at 1422103_a_at | 20955 | -1.307 | -0.3612 | Yes | ||
165 | ARF6 | 1418822_a_at 1418823_at 1418824_at | 20976 | -1.325 | -0.3488 | Yes | ||
166 | DUSP5 | 1437199_at | 21110 | -1.471 | -0.3401 | Yes | ||
167 | PCDH7 | 1427592_at 1437442_at 1449249_at 1456214_at | 21196 | -1.570 | -0.3283 | Yes | ||
168 | CITED2 | 1417129_a_at 1421267_a_at 1439915_at 1440091_at 1443561_at 1443926_at 1445638_at 1446176_at 1447861_x_at 1457632_s_at 1459301_at | 21247 | -1.621 | -0.3143 | Yes | ||
169 | MAP2K6 | 1426850_a_at 1459292_at | 21374 | -1.800 | -0.3020 | Yes | ||
170 | JUNB | 1415899_at | 21378 | -1.811 | -0.2840 | Yes | ||
171 | EGR1 | 1417065_at | 21457 | -1.965 | -0.2678 | Yes | ||
172 | KCNH2 | 1449544_a_at | 21520 | -2.088 | -0.2497 | Yes | ||
173 | RASSF2 | 1428392_at 1444889_at | 21601 | -2.281 | -0.2305 | Yes | ||
174 | FOXP1 | 1421140_a_at 1421141_a_at 1421142_s_at 1435222_at 1438802_at 1443258_at 1446280_at 1447209_at 1455242_at 1456851_at | 21632 | -2.349 | -0.2083 | Yes | ||
175 | PRM1 | 1415955_x_at 1437054_x_at 1439379_x_at | 21689 | -2.573 | -0.1850 | Yes | ||
176 | EGR2 | 1427682_a_at 1427683_at | 21692 | -2.582 | -0.1591 | Yes | ||
177 | ANXA6 | 1415818_at 1429246_a_at 1429247_at 1442288_at | 21771 | -2.909 | -0.1335 | Yes | ||
178 | ACTB | 1419734_at 1436722_a_at 1440365_at AFFX-b-ActinMur/M12481_3_at AFFX-b-ActinMur/M12481_5_at AFFX-b-ActinMur/M12481_M_at | 21800 | -3.133 | -0.1033 | Yes | ||
179 | CDKN1B | 1419497_at 1434045_at | 21841 | -3.422 | -0.0708 | Yes | ||
180 | MBNL1 | 1416904_at 1439686_at 1440315_at 1445106_at 1457924_at | 21855 | -3.600 | -0.0353 | Yes | ||
181 | UNC84B | 1433832_at 1439238_at | 21879 | -3.868 | 0.0025 | Yes |