Dataset | Set_02_ATM_minus_versus_BT_ATM_minus.phenotype_ATM_minus_versus_BT_ATM_minus.cls #ATM_minus_versus_BT_ATM_minus.phenotype_ATM_minus_versus_BT_ATM_minus.cls #ATM_minus_versus_BT_ATM_minus_repos |
Phenotype | phenotype_ATM_minus_versus_BT_ATM_minus.cls#ATM_minus_versus_BT_ATM_minus_repos |
Upregulated in class | BT_ATM_minus |
GeneSet | V$EFC_Q6 |
Enrichment Score (ES) | -0.44041252 |
Normalized Enrichment Score (NES) | -1.5213444 |
Nominal p-value | 0.0015898251 |
FDR q-value | 0.14232688 |
FWER p-Value | 0.854 |
PROBE | DESCRIPTION (from dataset) | GENE SYMBOL | GENE_TITLE | RANK IN GENE LIST | RANK METRIC SCORE | RUNNING ES | CORE ENRICHMENT | |
---|---|---|---|---|---|---|---|---|
1 | SLC7A1 | 1421533_at 1454991_at 1454992_at | 57 | 3.524 | 0.0299 | No | ||
2 | RREB1 | 1428657_at 1434741_at 1438216_at 1442047_at 1452862_at | 419 | 1.782 | 0.0297 | No | ||
3 | CD68 | 1449164_at | 626 | 1.510 | 0.0341 | No | ||
4 | UBE2L3 | 1417907_at 1417908_s_at 1448879_at 1448880_at | 715 | 1.422 | 0.0432 | No | ||
5 | XPOT | 1428772_at 1428949_at 1441681_at 1441682_s_at | 796 | 1.349 | 0.0520 | No | ||
6 | HES1 | 1418102_at | 868 | 1.281 | 0.0605 | No | ||
7 | PTPN22 | 1417995_at 1442820_at | 876 | 1.273 | 0.0719 | No | ||
8 | NONO | 1415820_x_at 1431239_at 1448103_s_at | 894 | 1.255 | 0.0827 | No | ||
9 | MRPL32 | 1424372_at | 934 | 1.226 | 0.0922 | No | ||
10 | NEK2 | 1417299_at 1437579_at 1437580_s_at 1443999_at | 1053 | 1.146 | 0.0974 | No | ||
11 | MORF4L2 | 1415778_at 1439413_x_at | 1208 | 1.046 | 0.0999 | No | ||
12 | PSMA2 | 1448206_at | 1405 | 0.939 | 0.0996 | No | ||
13 | FAF1 | 1418242_at 1434370_s_at | 1784 | 0.785 | 0.0894 | No | ||
14 | HNRPF | 1450963_at | 1904 | 0.740 | 0.0908 | No | ||
15 | NPAS3 | 1421567_at 1429138_at 1438060_at 1450287_at | 2244 | 0.642 | 0.0811 | No | ||
16 | ARMC3 | 1429815_at 1429816_at | 2275 | 0.636 | 0.0856 | No | ||
17 | CARS | 1427330_at 1452394_at | 2537 | 0.571 | 0.0789 | No | ||
18 | NUDC | 1419471_a_at | 2559 | 0.567 | 0.0831 | No | ||
19 | RPP21 | 1449021_at | 2677 | 0.537 | 0.0827 | No | ||
20 | FOSB | 1422134_at | 2811 | 0.516 | 0.0813 | No | ||
21 | DHX30 | 1416140_a_at 1438832_x_at 1438969_x_at 1453251_at | 2871 | 0.506 | 0.0833 | No | ||
22 | CACNA1D | 1427974_s_at 1428051_a_at | 2996 | 0.486 | 0.0821 | No | ||
23 | THRA | 1426997_at 1443952_at 1454675_at | 3088 | 0.471 | 0.0822 | No | ||
24 | GDPD2 | 1429076_a_at | 3190 | 0.457 | 0.0818 | No | ||
25 | FIBCD1 | 1435482_at | 3279 | 0.444 | 0.0818 | No | ||
26 | MT4 | 1450645_at | 3336 | 0.436 | 0.0833 | No | ||
27 | TCEAL1 | 1424634_at | 3385 | 0.431 | 0.0850 | No | ||
28 | SIX1 | 1427277_at | 3412 | 0.428 | 0.0878 | No | ||
29 | YWHAG | 1420816_at 1420817_at 1450012_x_at 1459693_x_at | 3542 | 0.410 | 0.0856 | No | ||
30 | INSRR | 1420564_at | 3552 | 0.408 | 0.0890 | No | ||
31 | SNPH | 1435210_s_at | 3553 | 0.408 | 0.0928 | No | ||
32 | BTG4 | 1426520_at | 3568 | 0.407 | 0.0959 | No | ||
33 | ELAVL4 | 1428741_at 1450258_a_at 1452894_at 1457399_at | 3801 | 0.382 | 0.0887 | No | ||
34 | BLOC1S2 | 1429048_at | 3909 | 0.372 | 0.0872 | No | ||
35 | PDCL2 | 1432503_a_at | 3954 | 0.369 | 0.0886 | No | ||
36 | TBC1D16 | 1435763_at 1442149_at | 4200 | 0.347 | 0.0805 | No | ||
37 | PRKCBP1 | 1426614_at 1429415_at 1445827_at 1456143_at 1458617_at | 4206 | 0.347 | 0.0835 | No | ||
38 | NDUFS4 | 1418117_at 1438166_x_at 1444464_at 1448959_at 1459760_at | 4316 | 0.337 | 0.0816 | No | ||
39 | OSR2 | 1426155_a_at 1430950_at | 4325 | 0.336 | 0.0843 | No | ||
40 | GRIK5 | 1418784_at | 4450 | 0.328 | 0.0817 | No | ||
41 | KCNN3 | 1421632_at 1459308_at | 4589 | 0.318 | 0.0782 | No | ||
42 | PHF15 | 1430081_at 1455345_at | 4596 | 0.317 | 0.0809 | No | ||
43 | SENP1 | 1424330_at 1428925_at 1451319_at | 4981 | 0.292 | 0.0659 | No | ||
44 | GALNT14 | 1453630_at | 5065 | 0.287 | 0.0647 | No | ||
45 | LDB2 | 1421101_a_at 1439557_s_at 1445126_at 1456786_at | 5468 | 0.261 | 0.0487 | No | ||
46 | PPIL4 | 1424043_at | 5508 | 0.259 | 0.0493 | No | ||
47 | HS2ST1 | 1422739_at 1440905_at 1450729_at 1450730_at | 5761 | 0.243 | 0.0399 | No | ||
48 | SHANK1 | 1444240_at | 6039 | 0.227 | 0.0293 | No | ||
49 | NTRK1 | 1443990_at | 6065 | 0.226 | 0.0302 | No | ||
50 | HOXC6 | 1427361_at 1427362_x_at 1427454_at | 6426 | 0.208 | 0.0156 | No | ||
51 | NLGN3 | 1456384_at | 6442 | 0.207 | 0.0168 | No | ||
52 | BMP6 | 1450759_at 1459947_at | 6486 | 0.206 | 0.0167 | No | ||
53 | NEUROD2 | 1444362_at | 6604 | 0.200 | 0.0132 | No | ||
54 | AKAP1 | 1418279_a_at 1449019_at | 6725 | 0.193 | 0.0094 | No | ||
55 | GGN | 1445278_at | 6730 | 0.193 | 0.0110 | No | ||
56 | VIT | 1426231_at | 6974 | 0.183 | 0.0015 | No | ||
57 | SLC39A12 | 1436611_at 1447248_at | 6993 | 0.183 | 0.0024 | No | ||
58 | CYP26B1 | 1460011_at | 7020 | 0.181 | 0.0029 | No | ||
59 | TTC16 | 1455414_at | 7117 | 0.177 | 0.0001 | No | ||
60 | PSD | 1435780_at | 7148 | 0.175 | 0.0003 | No | ||
61 | PCDH17 | 1436920_at 1446821_at 1453070_at | 7260 | 0.170 | -0.0032 | No | ||
62 | AMHR2 | 1427989_at 1438967_x_at 1457021_x_at | 7404 | 0.163 | -0.0083 | No | ||
63 | HOXD4 | 1450209_at | 7435 | 0.162 | -0.0082 | No | ||
64 | KCNA1 | 1417416_at 1437230_at 1442413_at 1455785_at | 7501 | 0.160 | -0.0097 | No | ||
65 | BMP5 | 1421282_at 1421283_at 1444470_x_at 1455851_at | 7683 | 0.152 | -0.0166 | No | ||
66 | ABI2 | 1433985_at 1436984_at 1444783_at 1458053_at 1460153_at | 7752 | 0.149 | -0.0184 | No | ||
67 | IGSF8 | 1460675_at | 7829 | 0.147 | -0.0205 | No | ||
68 | HNRPH2 | 1415963_at | 8031 | 0.139 | -0.0285 | No | ||
69 | FLRT1 | 1443143_at | 8081 | 0.137 | -0.0295 | No | ||
70 | PRRX1 | 1425526_a_at 1425527_at 1425528_at 1432129_a_at 1439774_at 1458004_at | 8140 | 0.135 | -0.0309 | No | ||
71 | TBPL1 | 1431415_a_at 1434907_at | 8146 | 0.135 | -0.0299 | No | ||
72 | TSGA14 | 1419686_at 1434576_at 1443792_at 1445416_at | 8172 | 0.134 | -0.0298 | No | ||
73 | PHTF1 | 1449148_a_at | 8206 | 0.133 | -0.0301 | No | ||
74 | EBF2 | 1418494_at 1446128_at 1449101_at 1449102_at | 8218 | 0.132 | -0.0294 | No | ||
75 | GLA | 1418248_at 1449006_at | 8219 | 0.132 | -0.0282 | No | ||
76 | NRGN | 1423231_at | 8471 | 0.123 | -0.0386 | No | ||
77 | CACNA2D3 | 1419225_at | 8520 | 0.121 | -0.0397 | No | ||
78 | TDRD7 | 1426716_at 1459216_at | 8529 | 0.121 | -0.0389 | No | ||
79 | CAMK2A | 1437125_at 1441734_at 1442707_at 1443876_at 1452453_a_at 1457311_at | 8753 | 0.113 | -0.0481 | No | ||
80 | CDX4 | 1421552_at | 8827 | 0.110 | -0.0505 | No | ||
81 | RPL32 | 1435897_at | 8829 | 0.110 | -0.0495 | No | ||
82 | FOXD3 | 1422210_at | 8848 | 0.110 | -0.0493 | No | ||
83 | WARS2 | 1429279_at 1435273_at | 8883 | 0.109 | -0.0499 | No | ||
84 | COPS5 | 1439243_x_at 1460171_at | 9537 | 0.086 | -0.0791 | No | ||
85 | TENC1 | 1452264_at | 9571 | 0.085 | -0.0799 | No | ||
86 | HM13 | 1417287_at 1428855_at 1428856_at 1438456_at 1438865_at 1455631_at | 9582 | 0.084 | -0.0795 | No | ||
87 | FKRP | 1436812_at 1437536_at 1438414_at | 9632 | 0.083 | -0.0810 | No | ||
88 | PPP3CB | 1427468_at 1428473_at 1428474_at 1433835_at 1446149_at 1459378_at | 9835 | 0.076 | -0.0896 | No | ||
89 | GRIN3A | 1436575_at 1438866_at 1458378_at | 9840 | 0.076 | -0.0891 | No | ||
90 | MITF | 1422025_at 1455214_at | 9875 | 0.075 | -0.0900 | No | ||
91 | DNAH9 | 1442412_at 1457401_at | 9886 | 0.075 | -0.0897 | No | ||
92 | SLC17A6 | 1418610_at 1428379_at | 9963 | 0.072 | -0.0926 | No | ||
93 | B3GALT2 | 1423084_at 1437433_at 1437644_at | 10282 | 0.061 | -0.1066 | No | ||
94 | HOXC4 | 1422870_at | 10313 | 0.060 | -0.1075 | No | ||
95 | TNKS1BP1 | 1427051_at | 10324 | 0.060 | -0.1074 | No | ||
96 | SYT6 | 1420188_at 1426106_a_at 1449766_at 1449767_x_at | 10392 | 0.058 | -0.1099 | No | ||
97 | EYA1 | 1421727_at 1443117_at 1457424_at | 10434 | 0.056 | -0.1113 | No | ||
98 | ZFP36L1 | 1422528_a_at 1450644_at | 10458 | 0.055 | -0.1118 | No | ||
99 | ROBO3 | 1421565_at 1436634_at | 10714 | 0.046 | -0.1231 | No | ||
100 | PCYT1B | 1436124_at 1437648_at | 10749 | 0.045 | -0.1243 | No | ||
101 | FGF9 | 1420795_at 1438718_at 1445258_at | 10862 | 0.041 | -0.1291 | No | ||
102 | MAGED1 | 1450062_a_at | 10886 | 0.040 | -0.1297 | No | ||
103 | ARL4A | 1425411_at 1431429_a_at 1435092_at | 10929 | 0.039 | -0.1313 | No | ||
104 | SOX2 | 1416967_at | 11017 | 0.036 | -0.1350 | No | ||
105 | HOXA10 | 1431475_a_at 1446408_at | 11106 | 0.034 | -0.1387 | No | ||
106 | SLK | 1419092_a_at 1425977_a_at 1433999_at 1441262_at 1443815_x_at 1449336_a_at | 11178 | 0.031 | -0.1417 | No | ||
107 | USP12 | 1425805_a_at 1427478_at 1434483_at | 11182 | 0.031 | -0.1416 | No | ||
108 | SASH1 | 1432055_at 1446880_at 1448005_at | 11386 | 0.024 | -0.1507 | No | ||
109 | RGL1 | 1418535_at 1440662_at 1449124_at | 11398 | 0.024 | -0.1510 | No | ||
110 | BTRC | 1417325_at 1425680_a_at 1443142_at 1446925_at 1447120_at 1456780_at | 11501 | 0.020 | -0.1555 | No | ||
111 | BTBD3 | 1425660_at 1433868_at 1442748_at | 11518 | 0.020 | -0.1560 | No | ||
112 | PCYT1A | 1421957_a_at 1424453_at 1438011_at 1450434_s_at | 11630 | 0.016 | -0.1610 | No | ||
113 | PAX6 | 1419271_at 1425960_s_at 1437816_at 1452526_a_at 1456342_at | 11763 | 0.011 | -0.1669 | No | ||
114 | HOXA4 | 1420226_x_at 1427354_at | 11821 | 0.009 | -0.1695 | No | ||
115 | DPYSL5 | 1441246_s_at 1449290_at | 11879 | 0.007 | -0.1720 | No | ||
116 | HOXA11 | 1420414_at | 11888 | 0.007 | -0.1723 | No | ||
117 | RNF141 | 1418466_at 1427120_at 1433655_at 1449086_at 1449087_at | 11909 | 0.006 | -0.1732 | No | ||
118 | STMN4 | 1418105_at | 12118 | -0.001 | -0.1828 | No | ||
119 | PDZRN4 | 1456512_at | 12293 | -0.007 | -0.1907 | No | ||
120 | LMO3 | 1455754_at | 12650 | -0.021 | -0.2069 | No | ||
121 | ITGB8 | 1436223_at | 12767 | -0.025 | -0.2120 | No | ||
122 | EFNB3 | 1423085_at | 12840 | -0.028 | -0.2150 | No | ||
123 | YWHAE | 1426384_a_at 1426385_x_at 1435702_s_at 1438839_a_at 1440841_at 1457173_at | 12851 | -0.028 | -0.2152 | No | ||
124 | HOXB6 | 1451660_a_at | 13142 | -0.039 | -0.2282 | No | ||
125 | FERD3L | 1422410_at | 13178 | -0.040 | -0.2295 | No | ||
126 | SLC22A8 | 1416966_at 1435418_at | 13430 | -0.050 | -0.2405 | No | ||
127 | EN2 | 1418868_at | 13474 | -0.052 | -0.2420 | No | ||
128 | PDE1A | 1431625_at 1449298_a_at | 13510 | -0.053 | -0.2432 | No | ||
129 | BCL2L2 | 1423572_at 1430453_a_at 1430454_x_at 1451029_at | 13652 | -0.058 | -0.2491 | No | ||
130 | ARID1A | 1447104_at | 13684 | -0.059 | -0.2500 | No | ||
131 | HMGN3 | 1431777_a_at 1434875_a_at 1459040_at | 13722 | -0.061 | -0.2511 | No | ||
132 | SEMA5B | 1422146_at 1435963_at | 13726 | -0.061 | -0.2507 | No | ||
133 | BNC2 | 1438861_at 1440593_at 1459132_at | 14638 | -0.101 | -0.2917 | No | ||
134 | CELSR2 | 1422073_a_at 1435336_at | 14780 | -0.107 | -0.2972 | No | ||
135 | SCNN1A | 1425088_at | 14854 | -0.111 | -0.2995 | No | ||
136 | TM9SF1 | 1418198_a_at 1442908_at | 14988 | -0.116 | -0.3046 | No | ||
137 | EBNA1BP2 | 1428315_at 1437512_x_at 1439898_at 1457668_x_at | 15185 | -0.126 | -0.3124 | No | ||
138 | MET | 1422990_at | 15401 | -0.136 | -0.3211 | No | ||
139 | SMCR7 | 1434072_at | 15525 | -0.143 | -0.3254 | No | ||
140 | MAP1A | 1460566_at | 15679 | -0.152 | -0.3310 | No | ||
141 | HOXA3 | 1427433_s_at 1441070_at 1452421_at | 16013 | -0.171 | -0.3448 | No | ||
142 | BCL2L1 | 1420887_a_at 1420888_at 1426050_at 1426191_a_at | 16049 | -0.173 | -0.3448 | No | ||
143 | THNSL1 | 1427936_at 1452605_at | 16205 | -0.183 | -0.3502 | No | ||
144 | ALMS1 | 1456950_at | 16271 | -0.186 | -0.3515 | No | ||
145 | PAK6 | 1445475_at 1455200_at | 16562 | -0.206 | -0.3630 | No | ||
146 | CBX6 | 1424407_s_at 1429290_at | 16910 | -0.232 | -0.3768 | No | ||
147 | RFX4 | 1432053_at 1436931_at 1443312_at | 17214 | -0.257 | -0.3883 | No | ||
148 | SIN3A | 1419101_at 1419102_at 1419900_at 1449343_s_at | 17401 | -0.274 | -0.3944 | No | ||
149 | VEGF | 1420909_at 1451959_a_at | 17478 | -0.280 | -0.3953 | No | ||
150 | EIF2C1 | 1434331_at | 17489 | -0.281 | -0.3932 | No | ||
151 | PPT2 | 1418302_at | 17529 | -0.285 | -0.3923 | No | ||
152 | GTF3C4 | 1434320_at 1438692_at | 17718 | -0.307 | -0.3981 | No | ||
153 | ADCK4 | 1448490_at | 17879 | -0.325 | -0.4025 | No | ||
154 | KCNA2 | 1422197_at | 18002 | -0.340 | -0.4050 | No | ||
155 | TRIM39 | 1418851_at | 18459 | -0.408 | -0.4222 | No | ||
156 | IRS2 | 1443969_at | 18477 | -0.410 | -0.4192 | No | ||
157 | ARPC5 | 1444568_at 1448129_at | 18576 | -0.426 | -0.4198 | No | ||
158 | BMPR2 | 1419616_at 1434310_at 1441652_at | 18629 | -0.435 | -0.4182 | No | ||
159 | CRIP2 | 1417311_at | 18670 | -0.443 | -0.4159 | No | ||
160 | MTA2 | 1423165_a_at | 18722 | -0.450 | -0.4141 | No | ||
161 | AP1M1 | 1416307_at 1459832_s_at | 19224 | -0.555 | -0.4320 | No | ||
162 | GPR22 | 1434672_at 1434673_at 1440019_at | 19270 | -0.563 | -0.4289 | No | ||
163 | PDE6D | 1416843_at | 19334 | -0.575 | -0.4265 | No | ||
164 | KLF3 | 1421604_a_at 1429360_at 1431630_a_at 1441200_at 1442920_at 1454666_at | 19551 | -0.626 | -0.4307 | No | ||
165 | GTF3C1 | 1434066_at 1438425_at 1456024_at 1459673_at | 19764 | -0.685 | -0.4341 | Yes | ||
166 | NCOA5 | 1424055_at 1456997_at | 19776 | -0.688 | -0.4283 | Yes | ||
167 | STRN4 | 1426209_at | 19853 | -0.713 | -0.4252 | Yes | ||
168 | JMJD1A | 1426810_at | 19946 | -0.744 | -0.4225 | Yes | ||
169 | STK36 | 1434733_at 1453584_at | 20041 | -0.774 | -0.4197 | Yes | ||
170 | FXYD6 | 1417343_at | 20086 | -0.793 | -0.4145 | Yes | ||
171 | TMEM24 | 1428095_a_at 1457585_at | 20152 | -0.818 | -0.4099 | Yes | ||
172 | RAD9A | 1418404_at | 20235 | -0.853 | -0.4058 | Yes | ||
173 | NOS1 | 1422949_at 1438483_at 1458626_at | 20285 | -0.875 | -0.4000 | Yes | ||
174 | KCNE1 | 1420672_at 1441035_at | 20288 | -0.875 | -0.3920 | Yes | ||
175 | DFNB31 | 1432555_at 1436485_s_at 1436486_x_at 1442507_at 1447438_at | 20323 | -0.891 | -0.3854 | Yes | ||
176 | PHCA | 1429520_a_at 1438435_at 1453179_at 1459771_x_at | 20364 | -0.910 | -0.3788 | Yes | ||
177 | CD69 | 1428735_at | 20367 | -0.911 | -0.3705 | Yes | ||
178 | DDX17 | 1437773_x_at 1439037_at 1452155_a_at | 20469 | -0.962 | -0.3663 | Yes | ||
179 | LSM6 | 1431054_at 1437108_at 1437109_s_at 1455926_at | 20624 | -1.061 | -0.3636 | Yes | ||
180 | DMD | 1417307_at 1430320_at 1446156_at 1448665_at 1457022_at | 20709 | -1.130 | -0.3570 | Yes | ||
181 | SLC4A2 | 1416637_at | 20720 | -1.137 | -0.3470 | Yes | ||
182 | STAT5B | 1422102_a_at 1422103_a_at | 20955 | -1.307 | -0.3457 | Yes | ||
183 | BDNF | 1422168_a_at 1422169_a_at | 21006 | -1.362 | -0.3355 | Yes | ||
184 | DDX31 | 1434182_at 1438962_s_at | 21063 | -1.413 | -0.3250 | Yes | ||
185 | KLHL1 | 1436465_at 1449241_at | 21215 | -1.588 | -0.3173 | Yes | ||
186 | CITED2 | 1417129_a_at 1421267_a_at 1439915_at 1440091_at 1443561_at 1443926_at 1445638_at 1446176_at 1447861_x_at 1457632_s_at 1459301_at | 21247 | -1.621 | -0.3038 | Yes | ||
187 | CCRK | 1422494_s_at | 21563 | -2.205 | -0.2979 | Yes | ||
188 | ST13 | 1416851_at 1442775_at 1460193_at | 21603 | -2.284 | -0.2787 | Yes | ||
189 | GBF1 | 1415709_s_at 1415757_at 1432677_at 1438207_at | 21660 | -2.442 | -0.2587 | Yes | ||
190 | CCDC6 | 1428311_at 1459159_a_at | 21685 | -2.555 | -0.2363 | Yes | ||
191 | RNF25 | 1442108_at 1448674_at | 21791 | -3.056 | -0.2129 | Yes | ||
192 | BCL6 | 1421818_at 1450381_a_at | 21792 | -3.059 | -0.1847 | Yes | ||
193 | CCND2 | 1416122_at 1416123_at 1416124_at 1430127_a_at 1434745_at 1448229_s_at 1455956_x_at | 21826 | -3.282 | -0.1560 | Yes | ||
194 | RRM1 | 1415878_at 1440073_at 1448127_at | 21885 | -4.048 | -0.1213 | Yes | ||
195 | SEP15 | 1448903_at 1454525_at | 21889 | -4.120 | -0.0834 | Yes | ||
196 | PSMF1 | 1424369_at 1424370_s_at 1424371_at 1451337_at | 21892 | -4.167 | -0.0451 | Yes | ||
197 | ETS2 | 1416268_at 1437809_x_at 1447685_x_at | 21910 | -5.096 | 0.0011 | Yes |