Details for gene set REACTOME_VIRAL_MESSENGER_RNA

Table: GSEA Results Summary

Dataset	Set_02_ATM_minus_versus_ATM_plus.phenotype_ATM_minus_versus_ATM_plus.cls #ATM_minus_versus_ATM_plus.phenotype_ATM_minus_versus_ATM_plus.cls #ATM_minus_versus_ATM_plus_repos
Phenotype	phenotype_ATM_minus_versus_ATM_plus.cls#ATM_minus_versus_ATM_plus_repos
Upregulated in class	ATM_minus
GeneSet	REACTOME_VIRAL_MESSENGER_RNA_SYNTHESIS
Enrichment Score (ES)	0.6293412
Normalized Enrichment Score (NES)	1.7672142
Nominal p-value	0.0
FDR q-value	0.06644581
FWER p-Value	0.469

Table: GSEA details [plain text format]
	PROBE	DESCRIPTION (from dataset)	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	YBX1	1418624_at 1430720_at 1438064_at	2	6.215	0.1675	Yes
2	THOC4	1417724_at 1436211_at	4	5.589	0.3182	Yes
3	CCAR1	1436156_at 1436157_at 1453319_at	116	2.802	0.3887	Yes
4	SF4	1424381_at 1444699_at	228	2.263	0.4447	Yes
5	SFRS3	1416150_a_at 1416151_at 1416152_a_at 1454993_a_at	272	2.122	0.5000	Yes
6	SFRS6	1416720_at 1416721_s_at 1447898_s_at 1448454_at	557	1.530	0.5283	Yes
7	SNRPD3	1422884_at 1422885_at 1449629_s_at	759	1.303	0.5542	Yes
8	SFRS7	1424033_at 1424883_s_at 1436871_at	792	1.274	0.5871	Yes
9	NCBP2	1423045_at 1423046_s_at 1450847_at	931	1.162	0.6122	Yes
10	U2AF1	1422509_at	1914	0.697	0.5861	Yes
11	POLR2B	1433552_a_at	2004	0.670	0.6001	Yes
12	GTF2F1	1417698_at 1417699_at	2117	0.636	0.6121	Yes
13	POLR2I	1428494_a_at	2258	0.598	0.6219	Yes
14	FUS	1451285_at 1451286_s_at 1455831_at 1458801_at	2428	0.563	0.6293	Yes
15	POLR2L	1428296_at	3026	0.445	0.6141	No
16	SNRPF	1428672_at	3145	0.428	0.6202	No
17	SRRM1	1420934_a_at 1420935_a_at 1442330_at 1447447_s_at 1450045_at 1454689_at 1459828_at	3511	0.386	0.6140	No
18	POLR2D	1424258_at	3558	0.382	0.6222	No
19	SMC1A	1417830_at 1417831_at 1417832_at	3722	0.362	0.6245	No
20	POLR2C	1416341_at	5795	0.230	0.5360	No
21	SNRPA	1417274_at	5830	0.228	0.5406	No
22	POLR2H	1424473_at	6184	0.213	0.5302	No
23	SFRS2	1415807_s_at 1427504_s_at 1427816_at 1452439_s_at	6535	0.199	0.5196	No
24	POLR2A	1422311_a_at 1426242_at 1458710_at	7249	0.174	0.4917	No
25	SFRS9	1417727_at	7731	0.158	0.4740	No
26	POLR2F	1415754_at 1427402_at	8043	0.147	0.4638	No
27	POLR2G	1416270_at	8184	0.142	0.4612	No
28	DHX9	1425617_at 1425618_at 1451770_s_at	8415	0.136	0.4544	No
29	SNRPD2	1452680_at	9683	0.097	0.3991	No
30	RNPS1	1437027_x_at 1437359_at 1437851_x_at 1438267_x_at 1448324_at	11848	0.035	0.3012	No
31	RBM5	1438069_a_at 1441319_at 1444618_at 1444971_at 1452186_at 1452187_at 1456262_at	12366	0.019	0.2781	No
32	PCBP2	1421743_a_at 1435881_at	15007	-0.076	0.1596	No
33	SNRPE	1451294_s_at	15312	-0.091	0.1482	No
34	RBMX	1416177_at 1416354_at 1416355_at 1426863_at 1437847_x_at	15823	-0.117	0.1280	No
35	U2AF2	1417260_at	16178	-0.140	0.1156	No
36	SNRPB	1419260_a_at 1437193_s_at	16391	-0.155	0.1101	No
37	POLR2J	1417720_at 1440065_at	16581	-0.169	0.1060	No
38	CD2BP2	1417223_at 1417224_a_at 1448624_at	17067	-0.213	0.0896	No
39	PCBP1	1448642_at	17210	-0.228	0.0893	No
40	SFRS1	1428099_a_at 1428100_at 1430982_at 1434972_x_at 1452430_s_at 1453722_s_at 1457136_at	17821	-0.299	0.0695	No
41	PTBP1	1424874_a_at 1450443_at 1458284_at	19598	-0.644	0.0057	No
42	GTF2F2	1426626_at 1443233_at	19799	-0.708	0.0157	No
43	NFX1	1419752_at 1419753_at 1428248_at 1442397_at	20287	-0.885	0.0173	No
44	POLR2E	1417138_s_at 1451093_at 1458326_at	21523	-2.147	0.0188	No