Details for gene set REACTOME_FORMATION_AND_MATURATION_OF_MRNA

Table: GSEA Results Summary

Dataset	Set_02_ATM_minus_versus_ATM_plus.phenotype_ATM_minus_versus_ATM_plus.cls #ATM_minus_versus_ATM_plus.phenotype_ATM_minus_versus_ATM_plus.cls #ATM_minus_versus_ATM_plus_repos
Phenotype	phenotype_ATM_minus_versus_ATM_plus.cls#ATM_minus_versus_ATM_plus_repos
Upregulated in class	ATM_minus
GeneSet	REACTOME_FORMATION_AND_MATURATION_OF_MRNA_TRANSCRIPT
Enrichment Score (ES)	0.50487053
Normalized Enrichment Score (NES)	1.6862265
Nominal p-value	0.0
FDR q-value	0.14199317
FWER p-Value	0.858

Table: GSEA details [plain text format]
	PROBE	DESCRIPTION (from dataset)	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	YBX1	1418624_at 1430720_at 1438064_at	2	6.215	0.0792	Yes
2	THOC4	1417724_at 1436211_at	4	5.589	0.1505	Yes
3	CCAR1	1436156_at 1436157_at 1453319_at	116	2.802	0.1812	Yes
4	SF4	1424381_at 1444699_at	228	2.263	0.2050	Yes
5	SFRS3	1416150_a_at 1416151_at 1416152_a_at 1454993_a_at	272	2.122	0.2301	Yes
6	GTF2E1	1428124_at 1443110_at	298	2.008	0.2546	Yes
7	TAF9	1422778_at 1451509_at	430	1.716	0.2705	Yes
8	SF3A1	1419087_s_at 1445719_at 1446687_at 1449333_at	445	1.691	0.2914	Yes
9	SFRS11	1427269_at 1430077_at 1439095_at 1452371_at	492	1.610	0.3099	Yes
10	CSTF1	1417117_at 1448597_at	550	1.538	0.3269	Yes
11	SFRS6	1416720_at 1416721_s_at 1447898_s_at 1448454_at	557	1.530	0.3461	Yes
12	SNRPA1	1417351_a_at 1417352_s_at 1417353_x_at	563	1.523	0.3653	Yes
13	GTF2E2	1448884_at	715	1.346	0.3756	Yes
14	SNRPD3	1422884_at 1422885_at 1449629_s_at	759	1.303	0.3902	Yes
15	SFRS7	1424033_at 1424883_s_at 1436871_at	792	1.274	0.4050	Yes
16	NCBP2	1423045_at 1423046_s_at 1450847_at	931	1.162	0.4135	Yes
17	PHF5A	1424170_at	1064	1.077	0.4213	Yes
18	CDC40	1442667_at 1445348_at 1453342_at 1457366_at	1114	1.048	0.4324	Yes
19	SF3A3	1423811_at	1223	0.989	0.4401	Yes
20	METTL3	1423099_a_at	1434	0.873	0.4416	Yes
21	GTF2B	1438066_at 1451135_at	1486	0.855	0.4502	Yes
22	NHP2L1	1416973_at	1888	0.705	0.4408	Yes
23	U2AF1	1422509_at	1914	0.697	0.4485	Yes
24	GTF2A2	1433528_at	1919	0.694	0.4572	Yes
25	POLR2B	1433552_a_at	2004	0.670	0.4619	Yes
26	GTF2F1	1417698_at 1417699_at	2117	0.636	0.4649	Yes
27	CSTF2	1419644_at 1419645_at 1455523_at	2246	0.601	0.4667	Yes
28	POLR2I	1428494_a_at	2258	0.598	0.4738	Yes
29	PABPN1	1415728_at 1422848_a_at 1422849_a_at 1422850_at	2261	0.598	0.4814	Yes
30	EFTUD2	1416557_a_at 1438835_a_at 1438836_at 1456107_x_at	2321	0.586	0.4861	Yes
31	FUS	1451285_at 1451286_s_at 1455831_at 1458801_at	2428	0.563	0.4885	Yes
32	GTF2H2	1450701_a_at 1457818_at	2542	0.537	0.4901	Yes
33	MNAT1	1432177_a_at	2675	0.510	0.4906	Yes
34	MAGOH	1416212_at	2904	0.464	0.4861	Yes
35	TAF12	1423398_at	2922	0.461	0.4912	Yes
36	TAF5	1435474_at	3011	0.447	0.4928	Yes
37	POLR2L	1428296_at	3026	0.445	0.4979	Yes
38	CPSF1	1417665_a_at	3055	0.440	0.5022	Yes
39	SNRPF	1428672_at	3145	0.428	0.5036	Yes
40	SSRP1	1426788_a_at 1426789_s_at 1426790_at	3323	0.407	0.5007	Yes
41	SF3B2	1429362_a_at 1433461_at 1438637_x_at 1453123_at 1456040_at 1456352_a_at 1459836_x_at	3452	0.392	0.4998	Yes
42	SRRM1	1420934_a_at 1420935_a_at 1442330_at 1447447_s_at 1450045_at 1454689_at 1459828_at	3511	0.386	0.5021	Yes
43	POLR2D	1424258_at	3558	0.382	0.5049	Yes
44	SMC1A	1417830_at 1417831_at 1417832_at	3722	0.362	0.5020	No
45	TAF1	1447417_at 1455513_at 1458744_at	4625	0.293	0.4644	No
46	CCNH	1418585_at	4710	0.286	0.4642	No
47	RDBP	1450705_at	4773	0.282	0.4650	No
48	TAF13	1448707_at	5170	0.260	0.4502	No
49	POLR2C	1416341_at	5795	0.230	0.4245	No
50	SNRPA	1417274_at	5830	0.228	0.4259	No
51	GTF2H1	1453169_a_at	6125	0.216	0.4152	No
52	SF3B1	1418561_at 1418562_at 1440818_s_at 1449138_at	6168	0.214	0.4160	No
53	POLR2H	1424473_at	6184	0.213	0.4180	No
54	SNRPB2	1426613_a_at 1452422_a_at	6202	0.212	0.4199	No
55	PCF11	1427159_at 1427160_at 1428724_at 1456489_at	6484	0.201	0.4096	No
56	SFRS2	1415807_s_at 1427504_s_at 1427816_at 1452439_s_at	6535	0.199	0.4099	No
57	ERCC2	1460727_at	6538	0.199	0.4123	No
58	SF3A2	1450576_a_at 1455546_s_at	6777	0.190	0.4038	No
59	POLR2A	1422311_a_at 1426242_at 1458710_at	7249	0.174	0.3845	No
60	SFRS9	1417727_at	7731	0.158	0.3645	No
61	POLR2F	1415754_at 1427402_at	8043	0.147	0.3521	No
62	GTF2A1	1421357_at	8084	0.146	0.3521	No
63	POLR2G	1416270_at	8184	0.142	0.3494	No
64	DHX9	1425617_at 1425618_at 1451770_s_at	8415	0.136	0.3406	No
65	RNMT	1436328_at 1440002_at 1446442_at 1453106_a_at	8591	0.131	0.3342	No
66	TAF11	1446161_at 1451995_at	8982	0.118	0.3179	No
67	PAPOLA	1424216_a_at 1424217_at 1427544_a_at 1444015_at 1455836_at	9255	0.110	0.3068	No
68	SNRPD2	1452680_at	9683	0.097	0.2885	No
69	RNPS1	1437027_x_at 1437359_at 1437851_x_at 1438267_x_at 1448324_at	11848	0.035	0.1898	No
70	ELL	1441928_x_at 1460643_at	12233	0.023	0.1725	No
71	RBM5	1438069_a_at 1441319_at 1444618_at 1444971_at 1452186_at 1452187_at 1456262_at	12366	0.019	0.1667	No
72	PRPF4	1429724_at 1438481_at	12700	0.010	0.1516	No
73	GTF2H3	1454092_a_at	14139	-0.041	0.0862	No
74	TXNL4A	1419179_at	14789	-0.067	0.0573	No
75	TH1L	1416198_at	14973	-0.074	0.0499	No
76	PCBP2	1421743_a_at 1435881_at	15007	-0.076	0.0494	No
77	SNRPE	1451294_s_at	15312	-0.091	0.0366	No
78	TCEB2	1428263_a_at	15676	-0.109	0.0214	No
79	CCNT1	1419313_at 1456477_at	15687	-0.110	0.0223	No
80	RBMX	1416177_at 1416354_at 1416355_at 1426863_at 1437847_x_at	15823	-0.117	0.0176	No
81	U2AF2	1417260_at	16178	-0.140	0.0032	No
82	SNRPB	1419260_a_at 1437193_s_at	16391	-0.155	-0.0046	No
83	PRPF6	1424036_at 1426026_at 1454789_x_at	16564	-0.168	-0.0103	No
84	POLR2J	1417720_at 1440065_at	16581	-0.169	-0.0089	No
85	TBP	1426469_a_at 1426470_at	16864	-0.193	-0.0193	No
86	CD2BP2	1417223_at 1417224_a_at 1448624_at	17067	-0.213	-0.0259	No
87	ERCC3	1448497_at	17165	-0.224	-0.0274	No
88	PCBP1	1448642_at	17210	-0.228	-0.0266	No
89	CSTF3	1424723_s_at 1443909_at	17258	-0.233	-0.0257	No
90	CDK9	1417269_at 1457240_at	17394	-0.249	-0.0287	No
91	TAF10	1448784_at	17569	-0.270	-0.0333	No
92	SFRS4	1448778_at	17648	-0.278	-0.0333	No
93	SFRS1	1428099_a_at 1428100_at 1430982_at 1434972_x_at 1452430_s_at 1453722_s_at 1457136_at	17821	-0.299	-0.0374	No
94	CDK7	1424257_at 1439511_at 1451741_a_at 1458987_at	17899	-0.310	-0.0369	No
95	PRPF8	1422453_at	18234	-0.358	-0.0477	No
96	RNGTT	1425844_a_at 1448714_at	19028	-0.505	-0.0775	No
97	TAF6	1418593_at	19186	-0.541	-0.0778	No
98	PTBP1	1424874_a_at 1450443_at 1458284_at	19598	-0.644	-0.0884	No
99	TAF4	1427460_at 1452438_s_at	19682	-0.670	-0.0837	No
100	GTF2F2	1426626_at 1443233_at	19799	-0.708	-0.0800	No
101	NFX1	1419752_at 1419753_at 1428248_at 1442397_at	20287	-0.885	-0.0910	No
102	SF3B3	1415985_at 1430075_at	21111	-1.484	-0.1098	No
103	TCEB3	1422591_at 1434117_at 1450676_at	21212	-1.604	-0.0939	No
104	TCEB1	1427914_a_at 1427915_s_at 1436226_at 1452593_a_at	21332	-1.774	-0.0767	No
105	CCNT2	1427088_at 1427089_at 1435445_at 1452297_at 1453399_at 1457439_at	21342	-1.790	-0.0543	No
106	POLR2E	1417138_s_at 1451093_at 1458326_at	21523	-2.147	-0.0351	No
107	NUDT21	1417681_at 1428339_at 1437213_at 1455966_s_at	21891	-4.223	0.0020	No