Details for gene set REACTOME_ELONGATION_AND_PROCESSING_OF_CAPPED

Table: GSEA Results Summary

Dataset	Set_02_ATM_minus_versus_ATM_plus.phenotype_ATM_minus_versus_ATM_plus.cls #ATM_minus_versus_ATM_plus.phenotype_ATM_minus_versus_ATM_plus.cls #ATM_minus_versus_ATM_plus_repos
Phenotype	phenotype_ATM_minus_versus_ATM_plus.cls#ATM_minus_versus_ATM_plus_repos
Upregulated in class	ATM_minus
GeneSet	REACTOME_ELONGATION_AND_PROCESSING_OF_CAPPED_TRANSCRIPTS
Enrichment Score (ES)	0.49829146
Normalized Enrichment Score (NES)	1.6088754
Nominal p-value	0.0026809652
FDR q-value	0.224634
FWER p-Value	0.99

Table: GSEA details [plain text format]
	PROBE	DESCRIPTION (from dataset)	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	YBX1	1418624_at 1430720_at 1438064_at	2	6.215	0.0917	Yes
2	THOC4	1417724_at 1436211_at	4	5.589	0.1742	Yes
3	CCAR1	1436156_at 1436157_at 1453319_at	116	2.802	0.2105	Yes
4	SF4	1424381_at 1444699_at	228	2.263	0.2389	Yes
5	SFRS3	1416150_a_at 1416151_at 1416152_a_at 1454993_a_at	272	2.122	0.2683	Yes
6	SF3A1	1419087_s_at 1445719_at 1446687_at 1449333_at	445	1.691	0.2854	Yes
7	SFRS11	1427269_at 1430077_at 1439095_at 1452371_at	492	1.610	0.3070	Yes
8	CSTF1	1417117_at 1448597_at	550	1.538	0.3271	Yes
9	SFRS6	1416720_at 1416721_s_at 1447898_s_at 1448454_at	557	1.530	0.3495	Yes
10	SNRPA1	1417351_a_at 1417352_s_at 1417353_x_at	563	1.523	0.3717	Yes
11	SNRPD3	1422884_at 1422885_at 1449629_s_at	759	1.303	0.3820	Yes
12	SFRS7	1424033_at 1424883_s_at 1436871_at	792	1.274	0.3994	Yes
13	NCBP2	1423045_at 1423046_s_at 1450847_at	931	1.162	0.4102	Yes
14	PHF5A	1424170_at	1064	1.077	0.4201	Yes
15	CDC40	1442667_at 1445348_at 1453342_at 1457366_at	1114	1.048	0.4333	Yes
16	SF3A3	1423811_at	1223	0.989	0.4430	Yes
17	METTL3	1423099_a_at	1434	0.873	0.4463	Yes
18	NHP2L1	1416973_at	1888	0.705	0.4360	Yes
19	U2AF1	1422509_at	1914	0.697	0.4451	Yes
20	POLR2B	1433552_a_at	2004	0.670	0.4509	Yes
21	GTF2F1	1417698_at 1417699_at	2117	0.636	0.4552	Yes
22	CSTF2	1419644_at 1419645_at 1455523_at	2246	0.601	0.4582	Yes
23	POLR2I	1428494_a_at	2258	0.598	0.4666	Yes
24	PABPN1	1415728_at 1422848_a_at 1422849_a_at 1422850_at	2261	0.598	0.4753	Yes
25	EFTUD2	1416557_a_at 1438835_a_at 1438836_at 1456107_x_at	2321	0.586	0.4813	Yes
26	FUS	1451285_at 1451286_s_at 1455831_at 1458801_at	2428	0.563	0.4847	Yes
27	GTF2H2	1450701_a_at 1457818_at	2542	0.537	0.4875	Yes
28	MNAT1	1432177_a_at	2675	0.510	0.4890	Yes
29	MAGOH	1416212_at	2904	0.464	0.4854	Yes
30	POLR2L	1428296_at	3026	0.445	0.4864	Yes
31	CPSF1	1417665_a_at	3055	0.440	0.4916	Yes
32	SNRPF	1428672_at	3145	0.428	0.4939	Yes
33	SSRP1	1426788_a_at 1426789_s_at 1426790_at	3323	0.407	0.4918	Yes
34	SF3B2	1429362_a_at 1433461_at 1438637_x_at 1453123_at 1456040_at 1456352_a_at 1459836_x_at	3452	0.392	0.4917	Yes
35	SRRM1	1420934_a_at 1420935_a_at 1442330_at 1447447_s_at 1450045_at 1454689_at 1459828_at	3511	0.386	0.4948	Yes
36	POLR2D	1424258_at	3558	0.382	0.4983	Yes
37	SMC1A	1417830_at 1417831_at 1417832_at	3722	0.362	0.4962	No
38	CCNH	1418585_at	4710	0.286	0.4552	No
39	RDBP	1450705_at	4773	0.282	0.4566	No
40	POLR2C	1416341_at	5795	0.230	0.4132	No
41	SNRPA	1417274_at	5830	0.228	0.4150	No
42	GTF2H1	1453169_a_at	6125	0.216	0.4047	No
43	SF3B1	1418561_at 1418562_at 1440818_s_at 1449138_at	6168	0.214	0.4060	No
44	POLR2H	1424473_at	6184	0.213	0.4084	No
45	SNRPB2	1426613_a_at 1452422_a_at	6202	0.212	0.4108	No
46	PCF11	1427159_at 1427160_at 1428724_at 1456489_at	6484	0.201	0.4009	No
47	SFRS2	1415807_s_at 1427504_s_at 1427816_at 1452439_s_at	6535	0.199	0.4015	No
48	ERCC2	1460727_at	6538	0.199	0.4044	No
49	SF3A2	1450576_a_at 1455546_s_at	6777	0.190	0.3963	No
50	POLR2A	1422311_a_at 1426242_at 1458710_at	7249	0.174	0.3773	No
51	SFRS9	1417727_at	7731	0.158	0.3576	No
52	POLR2F	1415754_at 1427402_at	8043	0.147	0.3456	No
53	POLR2G	1416270_at	8184	0.142	0.3413	No
54	DHX9	1425617_at 1425618_at 1451770_s_at	8415	0.136	0.3327	No
55	PAPOLA	1424216_a_at 1424217_at 1427544_a_at 1444015_at 1455836_at	9255	0.110	0.2960	No
56	SNRPD2	1452680_at	9683	0.097	0.2778	No
57	RNPS1	1437027_x_at 1437359_at 1437851_x_at 1438267_x_at 1448324_at	11848	0.035	0.1793	No
58	ELL	1441928_x_at 1460643_at	12233	0.023	0.1621	No
59	RBM5	1438069_a_at 1441319_at 1444618_at 1444971_at 1452186_at 1452187_at 1456262_at	12366	0.019	0.1563	No
60	PRPF4	1429724_at 1438481_at	12700	0.010	0.1412	No
61	GTF2H3	1454092_a_at	14139	-0.041	0.0760	No
62	TXNL4A	1419179_at	14789	-0.067	0.0473	No
63	TH1L	1416198_at	14973	-0.074	0.0400	No
64	PCBP2	1421743_a_at 1435881_at	15007	-0.076	0.0396	No
65	SNRPE	1451294_s_at	15312	-0.091	0.0270	No
66	TCEB2	1428263_a_at	15676	-0.109	0.0120	No
67	CCNT1	1419313_at 1456477_at	15687	-0.110	0.0132	No
68	RBMX	1416177_at 1416354_at 1416355_at 1426863_at 1437847_x_at	15823	-0.117	0.0087	No
69	U2AF2	1417260_at	16178	-0.140	-0.0054	No
70	SNRPB	1419260_a_at 1437193_s_at	16391	-0.155	-0.0128	No
71	PRPF6	1424036_at 1426026_at 1454789_x_at	16564	-0.168	-0.0182	No
72	POLR2J	1417720_at 1440065_at	16581	-0.169	-0.0165	No
73	CD2BP2	1417223_at 1417224_a_at 1448624_at	17067	-0.213	-0.0355	No
74	ERCC3	1448497_at	17165	-0.224	-0.0366	No
75	PCBP1	1448642_at	17210	-0.228	-0.0353	No
76	CSTF3	1424723_s_at 1443909_at	17258	-0.233	-0.0340	No
77	CDK9	1417269_at 1457240_at	17394	-0.249	-0.0365	No
78	SFRS4	1448778_at	17648	-0.278	-0.0440	No
79	SFRS1	1428099_a_at 1428100_at 1430982_at 1434972_x_at 1452430_s_at 1453722_s_at 1457136_at	17821	-0.299	-0.0474	No
80	CDK7	1424257_at 1439511_at 1451741_a_at 1458987_at	17899	-0.310	-0.0464	No
81	PRPF8	1422453_at	18234	-0.358	-0.0564	No
82	PTBP1	1424874_a_at 1450443_at 1458284_at	19598	-0.644	-0.1093	No
83	GTF2F2	1426626_at 1443233_at	19799	-0.708	-0.1080	No
84	NFX1	1419752_at 1419753_at 1428248_at 1442397_at	20287	-0.885	-0.1172	No
85	SF3B3	1415985_at 1430075_at	21111	-1.484	-0.1330	No
86	TCEB3	1422591_at 1434117_at 1450676_at	21212	-1.604	-0.1138	No
87	TCEB1	1427914_a_at 1427915_s_at 1436226_at 1452593_a_at	21332	-1.774	-0.0931	No
88	CCNT2	1427088_at 1427089_at 1435445_at 1452297_at 1453399_at 1457439_at	21342	-1.790	-0.0671	No
89	POLR2E	1417138_s_at 1451093_at 1458326_at	21523	-2.147	-0.0436	No
90	NUDT21	1417681_at 1428339_at 1437213_at 1455966_s_at	21891	-4.223	0.0020	No