Details for gene set V$NERF

Table: GSEA Results Summary

Dataset	set03_wtNotch_versus_absentNotch
Phenotype	NoPhenotypeAvailable
Upregulated in class	na_pos
GeneSet	V$NERF_Q2
Enrichment Score (ES)	0.30861416
Normalized Enrichment Score (NES)	1.489536
Nominal p-value	0.0017574693
FDR q-value	0.5078971
FWER p-Value	0.997

Table: GSEA details [plain text format]
	PROBE	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	RGS3	148	2.810	0.0088	Yes
2	FLT1	237	2.543	0.0192	Yes
3	ZFPM1	391	2.318	0.0247	Yes
4	FBXO36	397	2.311	0.0382	Yes
5	SH2D2A	408	2.294	0.0514	Yes
6	MID1	524	2.165	0.0581	Yes
7	FGR	603	2.084	0.0663	Yes
8	HIC1	695	2.010	0.0734	Yes
9	RBBP7	801	1.941	0.0793	Yes
10	HMGA1	845	1.910	0.0883	Yes
11	SNCG	984	1.827	0.0918	Yes
12	EBAG9	994	1.821	0.1021	Yes
13	CORO1A	999	1.818	0.1128	Yes
14	FBS1	1120	1.753	0.1167	Yes
15	RANBP1	1150	1.738	0.1255	Yes
16	DEF6	1168	1.731	0.1350	Yes
17	ERG	1231	1.700	0.1417	Yes
18	RASAL1	1307	1.669	0.1476	Yes
19	CREB3	1329	1.658	0.1564	Yes
20	HTF9C	1393	1.635	0.1627	Yes
21	SALL1	1401	1.632	0.1721	Yes
22	PITX2	1413	1.627	0.1812	Yes
23	SPRED2	1472	1.603	0.1876	Yes
24	PPP1R9B	1543	1.577	0.1933	Yes
25	NPY	1639	1.532	0.1973	Yes
26	NTRK3	1860	1.450	0.1940	Yes
27	MPL	1882	1.442	0.2015	Yes
28	PIGW	1964	1.411	0.2055	Yes
29	CENTD2	2008	1.394	0.2115	Yes
30	FXYD5	2144	1.350	0.2122	Yes
31	ITPR3	2174	1.342	0.2187	Yes
32	BAZ2A	2258	1.312	0.2220	Yes
33	RPS6KA4	2295	1.301	0.2278	Yes
34	UBE2L3	2297	1.300	0.2355	Yes
35	GMFB	2500	1.240	0.2320	Yes
36	HCLS1	2504	1.239	0.2392	Yes
37	LYN	2574	1.220	0.2428	Yes
38	STAT5A	2612	1.212	0.2480	Yes
39	SRPR	2613	1.212	0.2552	Yes
40	ROBO4	2619	1.210	0.2622	Yes
41	TMEM4	2650	1.204	0.2677	Yes
42	C1QTNF6	2666	1.201	0.2741	Yes
43	JUNB	2898	1.135	0.2684	Yes
44	SEMA4C	3028	1.101	0.2679	Yes
45	RASA1	3042	1.098	0.2738	Yes
46	TGIF2	3088	1.087	0.2778	Yes
47	POU6F2	3121	1.078	0.2825	Yes
48	DOK1	3214	1.057	0.2839	Yes
49	AGPAT1	3230	1.053	0.2893	Yes
50	TPP2	3300	1.036	0.2918	Yes
51	MAPK3	3384	1.017	0.2934	Yes
52	BMP4	3492	0.993	0.2935	Yes
53	TLN1	3759	0.932	0.2846	Yes
54	CAPZA1	3857	0.909	0.2848	Yes
55	ZHX2	3880	0.906	0.2890	Yes
56	POLD4	3884	0.904	0.2942	Yes
57	PTPN6	3931	0.894	0.2971	Yes
58	HMGN2	3971	0.885	0.3003	Yes
59	NFIA	4013	0.878	0.3033	Yes
60	GGTL3	4092	0.863	0.3042	Yes
61	ST7L	4194	0.847	0.3038	Yes
62	LANCL1	4199	0.846	0.3086	Yes
63	ROM1	4450	0.798	0.2998	No
64	TRAPPC3	4616	0.764	0.2954	No
65	MCTS1	4820	0.728	0.2888	No
66	SLC4A2	4914	0.711	0.2880	No
67	USP5	4919	0.710	0.2920	No
68	IKBKB	5064	0.685	0.2883	No
69	NLK	5345	0.634	0.2769	No
70	PIK3CG	5610	0.586	0.2661	No
71	ATP1A1	5811	0.555	0.2586	No
72	ARHGDIB	5862	0.547	0.2591	No
73	LYPLA2	5956	0.529	0.2572	No
74	LAT	5998	0.523	0.2581	No
75	ADAMTS4	6019	0.520	0.2602	No
76	MAP4K1	6319	0.468	0.2468	No
77	MDFI	6372	0.459	0.2467	No
78	LYL1	6557	0.430	0.2393	No
79	HOXC4	6793	0.391	0.2289	No
80	PEX11B	6860	0.380	0.2276	No
81	PLCB2	6892	0.375	0.2281	No
82	EGR3	7299	0.308	0.2079	No
83	DPP3	7511	0.276	0.1982	No
84	OLFML2A	7541	0.272	0.1982	No
85	CNNM1	7551	0.271	0.1993	No
86	TFRC	7634	0.257	0.1964	No
87	PEX16	7637	0.257	0.1979	No
88	STAT5B	7915	0.218	0.1841	No
89	CAMK1D	7928	0.217	0.1848	No
90	DDIT3	8277	0.163	0.1669	No
91	CLIC1	8506	0.126	0.1553	No
92	FOSL1	8533	0.121	0.1546	No
93	UQCRH	9011	0.046	0.1290	No
94	BTBD12	9051	0.041	0.1272	No
95	RHOV	9268	0.008	0.1155	No
96	SDCCAG8	9362	-0.008	0.1105	No
97	TWIST1	9443	-0.019	0.1063	No
98	PTPRN	9447	-0.019	0.1062	No
99	GRM3	9465	-0.022	0.1054	No
100	CHD2	9588	-0.042	0.0991	No
101	UBTF	9636	-0.050	0.0968	No
102	POU4F3	9683	-0.059	0.0947	No
103	HYAL2	9954	-0.108	0.0807	No
104	EFNA1	9981	-0.111	0.0800	No
105	CDK5	10117	-0.131	0.0734	No
106	CPNE8	10422	-0.176	0.0580	No
107	CAP1	10582	-0.201	0.0506	No
108	ACTR3	10655	-0.210	0.0479	No
109	TRO	10660	-0.210	0.0490	No
110	FCER1G	10964	-0.263	0.0341	No
111	MMRN2	10978	-0.264	0.0350	No
112	ARRB2	11012	-0.270	0.0348	No
113	UCHL5	11242	-0.304	0.0242	No
114	KLF13	11302	-0.313	0.0229	No
115	JAG1	12176	-0.437	-0.0218	No
116	CNTNAP1	12649	-0.506	-0.0444	No
117	CD79A	12651	-0.506	-0.0414	No
118	TOPORS	12707	-0.517	-0.0413	No
119	GOLGA7	12756	-0.523	-0.0408	No
120	HOXB9	12954	-0.557	-0.0482	No
121	PAX6	13085	-0.576	-0.0518	No
122	ITPKB	13166	-0.587	-0.0526	No
123	ATP5H	13182	-0.591	-0.0499	No
124	TENC1	13328	-0.618	-0.0541	No
125	DPP8	13362	-0.624	-0.0521	No
126	FURIN	13410	-0.633	-0.0509	No
127	SH3TC1	13552	-0.659	-0.0546	No
128	CD79B	13593	-0.664	-0.0528	No
129	TUSC3	13599	-0.665	-0.0491	No
130	PAK3	13853	-0.711	-0.0586	No
131	KCND1	13947	-0.727	-0.0593	No
132	FKBP10	13959	-0.729	-0.0555	No
133	NRXN3	14014	-0.737	-0.0540	No
134	NFATC3	14283	-0.790	-0.0639	No
135	GPR132	14437	-0.816	-0.0673	No
136	ATOH8	14518	-0.833	-0.0666	No
137	SLC30A7	14546	-0.839	-0.0631	No
138	SECISBP2	14653	-0.860	-0.0637	No
139	LOXL3	14769	-0.884	-0.0647	No
140	LSAMP	14814	-0.894	-0.0617	No
141	CDCA3	15089	-0.952	-0.0709	No
142	FGFR2	15164	-0.964	-0.0691	No
143	SHC3	15300	-0.993	-0.0705	No
144	LRRFIP2	15444	-1.023	-0.0722	No
145	MAP2K6	15559	-1.047	-0.0721	No
146	TCF12	15625	-1.060	-0.0693	No
147	ARHGAP8	15707	-1.077	-0.0672	No
148	MYOHD1	15876	-1.122	-0.0697	No
149	BCOR	15925	-1.135	-0.0655	No
150	CALM2	15937	-1.139	-0.0593	No
151	STARD13	16181	-1.197	-0.0653	No
152	DIABLO	16198	-1.202	-0.0590	No
153	NDUFS2	16277	-1.227	-0.0559	No
154	ELOVL5	16316	-1.236	-0.0506	No
155	VCL	16483	-1.276	-0.0519	No
156	RPS3	16684	-1.338	-0.0548	No
157	SLCO2B1	16959	-1.421	-0.0612	No
158	LST1	17074	-1.466	-0.0586	No
159	ZNF23	17648	-1.716	-0.0794	No
160	STARD8	17676	-1.730	-0.0705	No
161	EXTL2	17786	-1.798	-0.0657	No
162	SLITRK6	18328	-2.347	-0.0810	No
163	HN1	18419	-2.521	-0.0709	No
164	FCGR2B	18470	-2.702	-0.0574	No
165	ELK3	18481	-2.732	-0.0417	No
166	PCDH7	18515	-2.871	-0.0263	No
167	FREQ	18615	-5.316	0.0001	No