Details for gene set V$E2F

Table: GSEA Results Summary

Dataset	set03_wtNotch_versus_absentNotch
Phenotype	NoPhenotypeAvailable
Upregulated in class	na_neg
GeneSet	V$E2F_Q4
Enrichment Score (ES)	-0.3175021
Normalized Enrichment Score (NES)	-1.5471448
Nominal p-value	0.004672897
FDR q-value	0.22411169
FWER p-Value	0.914

Table: GSEA details [plain text format]
	PROBE	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	CDC45L	210	2.610	0.0061	No
2	ERBB2IP	226	2.574	0.0226	No
3	RAD51	275	2.473	0.0366	No
4	DDB2	278	2.471	0.0530	No
5	DNAJC11	696	2.006	0.0439	No
6	HIRA	850	1.908	0.0484	No
7	RANBP1	1150	1.738	0.0439	No
8	FBXO5	1345	1.651	0.0445	No
9	USP52	1351	1.649	0.0552	No
10	HTF9C	1393	1.635	0.0640	No
11	RPS6KA5	1456	1.611	0.0714	No
12	ING3	1641	1.531	0.0717	No
13	ARID4A	1900	1.434	0.0674	No
14	NRP2	2218	1.325	0.0591	No
15	HCN3	2343	1.286	0.0610	No
16	ATF5	2657	1.202	0.0521	No
17	SYNGR4	2894	1.136	0.0470	No
18	HS6ST3	3066	1.094	0.0450	No
19	TREX2	3142	1.072	0.0482	No
20	POLR2A	3240	1.050	0.0500	No
21	SEMA5A	3425	1.008	0.0468	No
22	NUP153	3586	0.969	0.0446	No
23	STAG2	3598	0.967	0.0505	No
24	PHF15	3621	0.962	0.0557	No
25	KCND2	3657	0.954	0.0602	No
26	NCL	3847	0.911	0.0561	No
27	PHF5A	3925	0.894	0.0579	No
28	HMGN2	3971	0.885	0.0614	No
29	DNMT1	4335	0.817	0.0473	No
30	PRKDC	4560	0.776	0.0403	No
31	CDT1	4826	0.727	0.0309	No
32	SFRS2	4907	0.712	0.0313	No
33	SFRS10	5063	0.685	0.0275	No
34	PHF13	5165	0.664	0.0265	No
35	POLD1	5388	0.625	0.0187	No
36	ILF3	5441	0.616	0.0200	No
37	INSM1	5551	0.594	0.0181	No
38	STK35	5814	0.555	0.0076	No
39	GRIA4	6138	0.499	-0.0066	No
40	HIST1H2BK	6278	0.475	-0.0109	No
41	PRPS1	6317	0.469	-0.0098	No
42	TOPBP1	6849	0.382	-0.0360	No
43	EZH2	7210	0.323	-0.0533	No
44	ABI2	7312	0.306	-0.0568	No
45	POLE2	7426	0.288	-0.0609	No
46	SFRS7	7432	0.287	-0.0593	No
47	HNRPD	7887	0.223	-0.0824	No
48	FHOD1	7999	0.205	-0.0870	No
49	EPHB1	8079	0.192	-0.0900	No
50	GMNN	8285	0.162	-0.1000	No
51	IPO7	8474	0.131	-0.1093	No
52	TYRO3	8890	0.063	-0.1314	No
53	CASP8AP2	9168	0.024	-0.1462	No
54	MXD3	9208	0.018	-0.1482	No
55	ZBTB4	9308	0.002	-0.1536	No
56	RQCD1	9386	-0.011	-0.1577	No
57	DNAJC9	9404	-0.014	-0.1585	No
58	WNT3	9406	-0.014	-0.1585	No
59	CHD2	9588	-0.042	-0.1680	No
60	SNRPD1	9727	-0.067	-0.1750	No
61	MYH10	9894	-0.098	-0.1833	No
62	MCM4	10097	-0.128	-0.1934	No
63	RHD	10122	-0.131	-0.1938	No
64	PODN	10155	-0.135	-0.1947	No
65	HOXC10	10281	-0.155	-0.2004	No
66	ARHGAP6	10323	-0.159	-0.2016	No
67	GPRC5B	10393	-0.171	-0.2041	No
68	BRMS1L	10438	-0.178	-0.2053	No
69	PAQR4	10768	-0.230	-0.2216	No
70	YBX2	10845	-0.242	-0.2241	No
71	EED	11059	-0.277	-0.2338	No
72	UFD1L	11186	-0.296	-0.2386	No
73	ACBD6	11284	-0.310	-0.2418	No
74	MCM8	11289	-0.310	-0.2399	No
75	MCM2	11323	-0.316	-0.2396	No
76	GABRB3	11664	-0.359	-0.2556	No
77	CORT	11697	-0.364	-0.2549	No
78	POLA2	11834	-0.385	-0.2597	No
79	ASXL2	11981	-0.407	-0.2649	No
80	MRPL40	12100	-0.426	-0.2684	No
81	E2F7	12128	-0.431	-0.2670	No
82	UNG	12685	-0.513	-0.2936	No
83	CDC6	12722	-0.519	-0.2921	No
84	NOLC1	13022	-0.568	-0.3045	No
85	H2AFZ	13036	-0.570	-0.3014	No
86	PAX6	13085	-0.576	-0.3001	No
87	KPNB1	13132	-0.583	-0.2987	No
88	PPP1CC	13267	-0.607	-0.3019	No
89	MCM7	13517	-0.651	-0.3110	No
90	SFRS1	13638	-0.672	-0.3130	Yes
91	RAB11B	13719	-0.687	-0.3127	Yes
92	MCM3	13769	-0.696	-0.3107	Yes
93	PPP1R8	13808	-0.703	-0.3081	Yes
94	PCNA	13902	-0.717	-0.3083	Yes
95	MSH2	13986	-0.732	-0.3079	Yes
96	SMAD6	14046	-0.743	-0.3061	Yes
97	USP37	14071	-0.747	-0.3024	Yes
98	CDCA7	14139	-0.762	-0.3009	Yes
99	WEE1	14185	-0.770	-0.2982	Yes
100	RBL1	14348	-0.802	-0.3015	Yes
101	POLD3	14386	-0.807	-0.2981	Yes
102	CRK	14395	-0.808	-0.2931	Yes
103	HIST1H2AH	14621	-0.853	-0.2996	Yes
104	TBX6	14645	-0.859	-0.2951	Yes
105	UXT	14780	-0.887	-0.2964	Yes
106	ACO2	14971	-0.928	-0.3005	Yes
107	MAZ	15086	-0.950	-0.3003	Yes
108	NELL2	15143	-0.960	-0.2969	Yes
109	CTCF	15168	-0.965	-0.2917	Yes
110	SP3	15202	-0.970	-0.2870	Yes
111	HNRPA1	15361	-1.006	-0.2888	Yes
112	SLC38A1	15365	-1.007	-0.2822	Yes
113	ADAMTS2	15553	-1.046	-0.2853	Yes
114	POLE4	15560	-1.048	-0.2786	Yes
115	PHC1	15847	-1.111	-0.2866	Yes
116	PIM1	15850	-1.112	-0.2793	Yes
117	CDC25A	15902	-1.129	-0.2745	Yes
118	IL4I1	15924	-1.135	-0.2680	Yes
119	NUP62	15945	-1.140	-0.2614	Yes
120	STMN1	15992	-1.152	-0.2562	Yes
121	MCM6	16163	-1.194	-0.2574	Yes
122	SUMO1	16210	-1.205	-0.2518	Yes
123	CCNT1	16235	-1.215	-0.2450	Yes
124	ATAD2	16327	-1.238	-0.2416	Yes
125	E2F3	16358	-1.247	-0.2348	Yes
126	CBX5	16548	-1.294	-0.2364	Yes
127	EFNA5	16760	-1.361	-0.2387	Yes
128	KCNA6	16769	-1.363	-0.2300	Yes
129	PVRL1	16935	-1.414	-0.2294	Yes
130	JPH1	16961	-1.422	-0.2213	Yes
131	E2F1	16981	-1.430	-0.2127	Yes
132	ALDH6A1	17024	-1.445	-0.2053	Yes
133	HNRPR	17112	-1.479	-0.2001	Yes
134	FMO4	17123	-1.484	-0.1907	Yes
135	FANCD2	17234	-1.532	-0.1863	Yes
136	ZCCHC8	17298	-1.559	-0.1793	Yes
137	CLSPN	17309	-1.565	-0.1693	Yes
138	STAG1	17357	-1.586	-0.1612	Yes
139	AK2	17412	-1.610	-0.1534	Yes
140	GSPT1	17489	-1.638	-0.1465	Yes
141	NASP	17528	-1.655	-0.1374	Yes
142	DMD	17599	-1.693	-0.1299	Yes
143	PPM1D	17695	-1.739	-0.1234	Yes
144	UGCGL1	17700	-1.742	-0.1119	Yes
145	HNRPUL1	17757	-1.779	-0.1030	Yes
146	DCK	17857	-1.842	-0.0960	Yes
147	PCSK1	17928	-1.892	-0.0871	Yes
148	RRM2	18156	-2.111	-0.0852	Yes
149	SLC6A4	18273	-2.268	-0.0763	Yes
150	AP4M1	18274	-2.272	-0.0611	Yes
151	SOAT1	18394	-2.471	-0.0509	Yes
152	TMPO	18410	-2.509	-0.0349	Yes
153	EPC1	18540	-2.994	-0.0218	Yes
154	SLCO3A1	18607	-3.858	0.0005	Yes