Details for gene set NUCLEOPLASM[GSEA]

Table: GSEA Results Summary

Dataset	set03_truncNotch_versus_wtNotch
Phenotype	NoPhenotypeAvailable
Upregulated in class	na_neg
GeneSet	NUCLEOPLASM
Enrichment Score (ES)	-0.4032021
Normalized Enrichment Score (NES)	-2.0647364
Nominal p-value	0.0
FDR q-value	0.008474731
FWER p-Value	0.093

Table: GSEA details [plain text format]
	PROBE	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	SMARCB1	139	3.434	0.0040	No
2	NUP98	169	3.340	0.0137	No
3	HTATIP	206	3.244	0.0226	No
4	GEMIN7	367	2.923	0.0238	No
5	POLR3H	782	2.450	0.0096	No
6	ERCC2	889	2.361	0.0117	No
7	THRAP3	1116	2.213	0.0069	No
8	MCRS1	1151	2.191	0.0124	No
9	SMARCD3	1200	2.166	0.0171	No
10	PML	1644	1.966	-0.0003	No
11	TAF10	1650	1.962	0.0060	No
12	FMR1	1729	1.931	0.0083	No
13	HMGA1	1742	1.926	0.0141	No
14	ISG20	1839	1.890	0.0153	No
15	ACTB	1873	1.871	0.0198	No
16	GLIS2	1941	1.846	0.0224	No
17	SMARCD1	2029	1.813	0.0237	No
18	GCM1	2050	1.807	0.0287	No
19	RBM14	2381	1.692	0.0165	No
20	POLR2E	2385	1.691	0.0220	No
21	HES6	2393	1.689	0.0273	No
22	RUVBL2	2450	1.673	0.0299	No
23	POLR2B	2703	1.604	0.0216	No
24	ATXN1	2880	1.552	0.0173	No
25	HDAC6	3020	1.516	0.0149	No
26	TAF7	3075	1.503	0.0170	No
27	IFI16	3128	1.490	0.0192	No
28	NUFIP1	3206	1.467	0.0199	No
29	PMF1	3364	1.430	0.0162	No
30	NKX2-5	3448	1.408	0.0165	No
31	HDAC5	3516	1.394	0.0175	No
32	TAF6	3546	1.388	0.0206	No
33	HDAC3	3770	1.334	0.0130	No
34	EPAS1	3791	1.330	0.0164	No
35	APTX	3829	1.323	0.0188	No
36	HDAC7A	3879	1.310	0.0206	No
37	LRCH4	3925	1.302	0.0225	No
38	WDR4	4022	1.284	0.0216	No
39	FOXE3	4238	1.238	0.0141	No
40	MPG	4294	1.226	0.0153	No
41	NAP1L3	4473	1.183	0.0096	No
42	TAF12	4687	1.139	0.0018	No
43	MCM7	4727	1.130	0.0035	No
44	BNIP3	4730	1.129	0.0072	No
45	SPTBN4	5201	1.042	-0.0148	No
46	OGG1	5278	1.028	-0.0155	No
47	TIMM50	5588	0.966	-0.0290	No
48	HIF1A	6233	0.849	-0.0611	No
49	ZBTB16	6501	0.800	-0.0729	No
50	FIGLA	6533	0.796	-0.0719	No
51	HDAC9	6717	0.760	-0.0793	No
52	GEMIN6	7043	0.707	-0.0945	No
53	FOXF2	7204	0.679	-0.1010	No
54	NUDT21	7286	0.666	-0.1031	No
55	NDUFA13	7453	0.635	-0.1100	No
56	HIPK2	7510	0.624	-0.1109	No
57	LMO4	7641	0.599	-0.1160	No
58	TAF6L	7652	0.596	-0.1145	No
59	TDG	7781	0.570	-0.1195	No
60	POLR2J	7990	0.533	-0.1290	No
61	U2AF1	8030	0.525	-0.1294	No
62	TFIP11	8111	0.510	-0.1320	No
63	PHB	8480	0.439	-0.1505	No
64	RUVBL1	8510	0.434	-0.1506	No
65	CIB1	8652	0.407	-0.1569	No
66	POLA1	8844	0.374	-0.1660	No
67	GEMIN5	9038	0.336	-0.1754	No
68	POLR3C	9103	0.322	-0.1778	No
69	CHAF1B	9230	0.291	-0.1836	No
70	NCR1	9352	0.268	-0.1893	No
71	PPP1R9B	9478	0.238	-0.1953	No
72	TP53	9507	0.232	-0.1960	No
73	NPAS2	9550	0.222	-0.1976	No
74	HDAC10	9965	0.134	-0.2196	No
75	PRM2	10096	0.111	-0.2263	No
76	SMARCD2	10234	0.079	-0.2334	No
77	ELP4	10443	0.033	-0.2446	No
78	ELL2	10453	0.031	-0.2450	No
79	CDK9	10456	0.030	-0.2450	No
80	POLR2A	10546	0.010	-0.2498	No
81	CHAF1A	10863	-0.064	-0.2668	No
82	XPO1	10884	-0.068	-0.2676	No
83	SP100	10912	-0.075	-0.2688	No
84	TAF4	11511	-0.211	-0.3006	No
85	RELA	11860	-0.290	-0.3185	No
86	HDAC8	12185	-0.367	-0.3349	No
87	PRPF31	12341	-0.405	-0.3419	No
88	CBX1	12541	-0.458	-0.3512	No
89	PHF21A	12693	-0.494	-0.3577	No
90	GTF2F1	12759	-0.510	-0.3595	No
91	PTBP1	12809	-0.523	-0.3604	No
92	NAP1L2	12852	-0.534	-0.3609	No
93	CPSF3	12862	-0.536	-0.3596	No
94	HDAC11	12960	-0.562	-0.3630	No
95	PAX8	12967	-0.567	-0.3614	No
96	CLOCK	13167	-0.620	-0.3701	No
97	DYRK1A	13236	-0.637	-0.3717	No
98	ELP3	13274	-0.651	-0.3715	No
99	TAF9	13299	-0.660	-0.3706	No
100	GTF3C3	13323	-0.667	-0.3696	No
101	GTF2H4	13372	-0.683	-0.3699	No
102	PTF1A	13427	-0.697	-0.3705	No
103	GTF3C5	13465	-0.708	-0.3701	No
104	ZNF148	13471	-0.708	-0.3680	No
105	POLI	13472	-0.709	-0.3656	No
106	NR6A1	13518	-0.723	-0.3656	No
107	COIL	13604	-0.753	-0.3677	No
108	NFYC	13982	-0.858	-0.3852	No
109	MEN1	14004	-0.866	-0.3835	No
110	PPARGC1A	14078	-0.893	-0.3844	No
111	SNAPC4	14196	-0.931	-0.3877	No
112	ARID4A	14265	-0.953	-0.3881	No
113	PITX2	14353	-0.981	-0.3896	No
114	EDF1	14376	-0.989	-0.3874	No
115	MED6	14380	-0.990	-0.3843	No
116	HCLS1	14443	-1.009	-0.3842	No
117	PPARGC1B	14457	-1.013	-0.3815	No
118	ELF4	14590	-1.055	-0.3851	No
119	SHFM1	14593	-1.056	-0.3817	No
120	UBE2I	14608	-1.062	-0.3789	No
121	ERCC3	14676	-1.088	-0.3789	No
122	MYO6	15002	-1.208	-0.3924	No
123	TOPBP1	15048	-1.224	-0.3908	No
124	MED4	15055	-1.228	-0.3869	No
125	PHF12	15154	-1.268	-0.3880	No
126	FUSIP1	15328	-1.334	-0.3929	No
127	SAP30	15343	-1.339	-0.3892	No
128	YEATS4	15389	-1.360	-0.3870	No
129	ARNTL	15540	-1.419	-0.3904	No
130	ERCC5	15767	-1.518	-0.3976	No
131	HDAC1	15872	-1.567	-0.3979	Yes
132	TAF11	15919	-1.587	-0.3951	Yes
133	MKI67IP	16014	-1.634	-0.3947	Yes
134	IKBKAP	16033	-1.643	-0.3901	Yes
135	MRE11A	16048	-1.648	-0.3854	Yes
136	TRIM27	16052	-1.651	-0.3800	Yes
137	WDHD1	16121	-1.681	-0.3780	Yes
138	ASH2L	16123	-1.681	-0.3724	Yes
139	IVNS1ABP	16132	-1.685	-0.3672	Yes
140	CPSF1	16348	-1.786	-0.3728	Yes
141	RTCD1	16377	-1.800	-0.3683	Yes
142	ASF1A	16393	-1.808	-0.3630	Yes
143	NFYA	16411	-1.818	-0.3578	Yes
144	EZH2	16450	-1.831	-0.3537	Yes
145	ACTL6A	16453	-1.832	-0.3477	Yes
146	NCOA6	16535	-1.874	-0.3457	Yes
147	TBP	16552	-1.880	-0.3403	Yes
148	GTF3C1	16566	-1.891	-0.3346	Yes
149	SMARCC1	16602	-1.911	-0.3301	Yes
150	NAP1L4	16604	-1.914	-0.3237	Yes
151	MED12	16648	-1.932	-0.3195	Yes
152	TOP2A	16650	-1.933	-0.3131	Yes
153	SMARCA4	16653	-1.934	-0.3067	Yes
154	HNRPK	16662	-1.937	-0.3006	Yes
155	CDKN2A	16805	-2.022	-0.3015	Yes
156	SMARCE1	16820	-2.028	-0.2954	Yes
157	NAP1L1	16827	-2.032	-0.2889	Yes
158	POLQ	16854	-2.044	-0.2835	Yes
159	POLR3K	17001	-2.120	-0.2843	Yes
160	GTF3C2	17041	-2.142	-0.2792	Yes
161	ARID1A	17156	-2.208	-0.2779	Yes
162	RPA1	17181	-2.221	-0.2718	Yes
163	RBBP5	17242	-2.254	-0.2674	Yes
164	ATXN3	17252	-2.261	-0.2603	Yes
165	RB1	17323	-2.301	-0.2564	Yes
166	INTS6	17365	-2.327	-0.2508	Yes
167	WRN	17392	-2.343	-0.2443	Yes
168	SAP18	17437	-2.371	-0.2387	Yes
169	RBM39	17472	-2.390	-0.2325	Yes
170	GIT2	17475	-2.391	-0.2246	Yes
171	ING2	17490	-2.402	-0.2172	Yes
172	TOPORS	17494	-2.407	-0.2093	Yes
173	SFRS2	17548	-2.439	-0.2040	Yes
174	OIP5	17566	-2.449	-0.1966	Yes
175	XRCC6	17640	-2.499	-0.1922	Yes
176	GTF2H1	17644	-2.502	-0.1839	Yes
177	NUP54	17751	-2.571	-0.1810	Yes
178	KPNA2	17761	-2.577	-0.1729	Yes
179	HDAC2	17934	-2.708	-0.1731	Yes
180	SFRS2IP	17936	-2.710	-0.1640	Yes
181	SMAD2	17972	-2.742	-0.1567	Yes
182	NFYB	17985	-2.753	-0.1481	Yes
183	CDK8	17994	-2.758	-0.1392	Yes
184	CHEK2	18071	-2.831	-0.1338	Yes
185	RSF1	18074	-2.833	-0.1244	Yes
186	ZNF638	18075	-2.833	-0.1149	Yes
187	TOP1	18114	-2.872	-0.1073	Yes
188	SMARCA5	18120	-2.882	-0.0978	Yes
189	TAF13	18182	-2.948	-0.0912	Yes
190	TOP2B	18210	-2.984	-0.0826	Yes
191	NARG1	18243	-3.040	-0.0742	Yes
192	SMAD4	18254	-3.068	-0.0644	Yes
193	MDM2	18357	-3.228	-0.0590	Yes
194	GTF3C4	18363	-3.239	-0.0484	Yes
195	MPHOSPH1	18370	-3.248	-0.0378	Yes
196	EED	18439	-3.421	-0.0300	Yes
197	POLH	18493	-3.557	-0.0209	Yes
198	TAF5	18566	-4.062	-0.0111	Yes
199	EPC1	18571	-4.100	0.0024	Yes