Details for gene set V$PAX4

Table: GSEA Results Summary

Dataset	set03_truncNotch_versus_absentNotch
Phenotype	NoPhenotypeAvailable
Upregulated in class	na_pos
GeneSet	V$PAX4_01
Enrichment Score (ES)	0.28670058
Normalized Enrichment Score (NES)	1.37598
Nominal p-value	0.013618677
FDR q-value	0.61469674
FWER p-Value	1.0

Table: GSEA details [plain text format]
	PROBE	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	DTX1	2	8.089	0.0235	Yes
2	HES1	19	6.611	0.0419	Yes
3	RNF10	20	6.596	0.0611	Yes
4	HTF9C	101	5.047	0.0715	Yes
5	CAPN5	295	4.145	0.0731	Yes
6	FBXL19	304	4.109	0.0846	Yes
7	OAZ2	482	3.654	0.0857	Yes
8	SUOX	567	3.501	0.0913	Yes
9	PLAGL1	570	3.494	0.1014	Yes
10	NCDN	603	3.437	0.1097	Yes
11	DGKZ	620	3.400	0.1187	Yes
12	HOXB1	688	3.297	0.1247	Yes
13	RPS6KA4	694	3.288	0.1340	Yes
14	ETV5	791	3.153	0.1380	Yes
15	LBX1	832	3.108	0.1449	Yes
16	PTPN23	921	3.018	0.1489	Yes
17	RING1	956	2.983	0.1558	Yes
18	EIF5A	1032	2.891	0.1601	Yes
19	CTDSP1	1064	2.863	0.1668	Yes
20	AAMP	1078	2.846	0.1744	Yes
21	TITF1	1092	2.839	0.1819	Yes
22	NEUROG1	1138	2.802	0.1877	Yes
23	LRP2	1160	2.779	0.1946	Yes
24	PRKAG1	1192	2.756	0.2010	Yes
25	BAT3	1212	2.739	0.2079	Yes
26	PIK3CD	1377	2.615	0.2067	Yes
27	TRERF1	1394	2.602	0.2134	Yes
28	FBXO36	1585	2.468	0.2103	Yes
29	POFUT1	1647	2.428	0.2140	Yes
30	POU3F3	1729	2.372	0.2165	Yes
31	HOXA10	1762	2.351	0.2217	Yes
32	SART3	1836	2.315	0.2245	Yes
33	PTPRG	1851	2.301	0.2304	Yes
34	MNT	1854	2.299	0.2370	Yes
35	ASB7	1895	2.275	0.2415	Yes
36	ANGPT1	1903	2.268	0.2477	Yes
37	CNTFR	2102	2.166	0.2433	Yes
38	STX1B2	2267	2.090	0.2405	Yes
39	RRAS	2375	2.041	0.2406	Yes
40	CHKB	2427	2.022	0.2437	Yes
41	LEMD2	2428	2.022	0.2496	Yes
42	PGF	2451	2.011	0.2543	Yes
43	DAAM2	2586	1.955	0.2527	Yes
44	CIZ1	2692	1.906	0.2526	Yes
45	PHKB	2709	1.900	0.2572	Yes
46	TPM1	2722	1.894	0.2621	Yes
47	SALL1	2767	1.878	0.2652	Yes
48	CIC	2775	1.875	0.2703	Yes
49	PER2	2915	1.815	0.2680	Yes
50	ABHD2	3021	1.773	0.2675	Yes
51	SORCS3	3031	1.771	0.2722	Yes
52	AP1B1	3234	1.710	0.2662	Yes
53	EFHD1	3269	1.700	0.2693	Yes
54	ESRRA	3348	1.673	0.2700	Yes
55	PAQR4	3397	1.661	0.2722	Yes
56	HOXB6	3424	1.651	0.2756	Yes
57	RKHD3	3438	1.647	0.2797	Yes
58	NTRK3	3447	1.644	0.2841	Yes
59	KLC2	3487	1.631	0.2867	Yes
60	BRUNOL6	4195	1.437	0.2525	No
61	CDK9	4233	1.427	0.2547	No
62	SLC35B1	4448	1.369	0.2471	No
63	HOXA1	4500	1.357	0.2483	No
64	DNM1	4573	1.338	0.2482	No
65	BDNF	4682	1.313	0.2462	No
66	BCL11A	4692	1.312	0.2496	No
67	ARF6	4786	1.291	0.2483	No
68	CDX4	4803	1.286	0.2511	No
69	RAB33A	4818	1.282	0.2541	No
70	GPR37L1	5243	1.174	0.2345	No
71	SEMA3B	5416	1.135	0.2285	No
72	FGD1	5502	1.115	0.2272	No
73	NR0B2	5576	1.100	0.2264	No
74	ARHGEF12	5650	1.086	0.2256	No
75	PCTK1	5667	1.084	0.2279	No
76	SLC38A3	5707	1.073	0.2289	No
77	CACNA1D	5747	1.064	0.2299	No
78	GNB2	5761	1.062	0.2323	No
79	DLL4	6323	0.946	0.2046	No
80	TNXB	6337	0.944	0.2067	No
81	NRXN1	6408	0.928	0.2056	No
82	C1QL1	6454	0.919	0.2058	No
83	PHF15	6741	0.863	0.1928	No
84	MXD4	6811	0.849	0.1915	No
85	HNRPR	7002	0.811	0.1836	No
86	DDIT3	7312	0.746	0.1690	No
87	ACOX2	7344	0.740	0.1695	No
88	GRIN2A	7385	0.732	0.1695	No
89	TRIM3	7704	0.666	0.1541	No
90	PDGFB	8041	0.591	0.1376	No
91	SLC16A10	8087	0.582	0.1369	No
92	CTF1	8123	0.574	0.1367	No
93	IRX2	8239	0.547	0.1320	No
94	ZHX2	8396	0.512	0.1251	No
95	CDH16	8753	0.431	0.1070	No
96	EFNA5	8849	0.407	0.1030	No
97	JARID2	8859	0.404	0.1037	No
98	CCNI	8905	0.393	0.1024	No
99	GRIK1	9086	0.350	0.0937	No
100	GALNT10	9302	0.303	0.0829	No
101	PRDM1	9408	0.281	0.0780	No
102	HOXD10	9500	0.262	0.0738	No
103	KCNK13	9544	0.251	0.0722	No
104	RBP4	9974	0.147	0.0494	No
105	HMGN2	10306	0.061	0.0316	No
106	ZIC2	10343	0.053	0.0298	No
107	PACS1	10433	0.029	0.0251	No
108	SP4	10550	0.002	0.0188	No
109	CPT1B	10653	-0.022	0.0133	No
110	SLC25A28	10708	-0.038	0.0105	No
111	SLC4A1	10904	-0.087	0.0002	No
112	DNAJB5	10940	-0.096	-0.0014	No
113	SMAD1	11244	-0.174	-0.0174	No
114	XPO1	11398	-0.210	-0.0251	No
115	LRP1	11519	-0.238	-0.0309	No
116	PBX1	11859	-0.333	-0.0483	No
117	SPRY2	11953	-0.354	-0.0523	No
118	MMP11	12183	-0.417	-0.0635	No
119	LIN28	12211	-0.424	-0.0637	No
120	CDX1	12236	-0.430	-0.0638	No
121	PHF12	12465	-0.493	-0.0747	No
122	HOXA7	12623	-0.539	-0.0817	No
123	SSH2	12718	-0.569	-0.0851	No
124	RBMS3	13141	-0.686	-0.1060	No
125	PCF11	13200	-0.708	-0.1071	No
126	COL27A1	13201	-0.708	-0.1050	No
127	EVX1	13239	-0.718	-0.1049	No
128	NFKBIA	13366	-0.761	-0.1095	No
129	GTF2IRD1	13550	-0.814	-0.1171	No
130	ATOH1	13639	-0.842	-0.1194	No
131	AMFR	13831	-0.901	-0.1272	No
132	PLAGL2	13943	-0.940	-0.1304	No
133	IL17B	13981	-0.951	-0.1297	No
134	APBA2BP	14265	-1.049	-0.1420	No
135	ZFYVE27	14282	-1.058	-0.1397	No
136	NR4A3	14316	-1.070	-0.1384	No
137	CPNE1	14488	-1.129	-0.1444	No
138	NRD1	14604	-1.174	-0.1472	No
139	ISCU	14631	-1.185	-0.1452	No
140	NF2	14671	-1.202	-0.1438	No
141	ACSL3	14755	-1.230	-0.1447	No
142	PDE4D	15041	-1.357	-0.1562	No
143	H1FX	15079	-1.371	-0.1542	No
144	E2F1	15267	-1.457	-0.1601	No
145	DNAJC11	15846	-1.732	-0.1864	No
146	UBTF	15914	-1.772	-0.1849	No
147	NFATC4	15924	-1.780	-0.1802	No
148	PSIP1	15927	-1.781	-0.1751	No
149	ANKMY2	16041	-1.852	-0.1758	No
150	ADAMTSL1	16184	-1.934	-0.1779	No
151	PICALM	16198	-1.942	-0.1730	No
152	GADD45G	16295	-1.999	-0.1723	No
153	WNT10A	16371	-2.056	-0.1704	No
154	RBBP6	16408	-2.077	-0.1663	No
155	PABPC4	16565	-2.188	-0.1684	No
156	SYNCRIP	16752	-2.313	-0.1717	No
157	CTBP2	16769	-2.322	-0.1658	No
158	TAF11	17144	-2.628	-0.1785	No
159	EIF2C2	17153	-2.637	-0.1712	No
160	HIF3A	17171	-2.652	-0.1644	No
161	MAPK10	17207	-2.691	-0.1585	No
162	YWHAZ	17324	-2.796	-0.1566	No
163	ADIPOR2	17380	-2.838	-0.1513	No
164	PABPC1	17401	-2.865	-0.1441	No
165	MAPT	17609	-3.078	-0.1463	No
166	APPBP1	17649	-3.110	-0.1394	No
167	ZCCHC9	17684	-3.150	-0.1320	No
168	KLF13	17731	-3.203	-0.1252	No
169	GTF3C2	17766	-3.248	-0.1176	No
170	MAPRE1	17831	-3.327	-0.1113	No
171	EIF4A1	17880	-3.409	-0.1040	No
172	RANBP1	17962	-3.537	-0.0981	No
173	TPR	17981	-3.575	-0.0887	No
174	MAML1	18015	-3.619	-0.0799	No
175	ZDHHC5	18042	-3.656	-0.0706	No
176	TNRC15	18145	-3.835	-0.0650	No
177	KPNB1	18242	-4.033	-0.0585	No
178	ELAVL1	18282	-4.139	-0.0485	No
179	TAF5	18333	-4.253	-0.0388	No
180	MXI1	18336	-4.258	-0.0265	No
181	EED	18339	-4.265	-0.0142	No
182	USP39	18409	-4.505	-0.0048	No
183	SLC30A5	18566	-5.483	0.0027	No