Details for gene set V$GFI1

Table: GSEA Results Summary

Dataset	set03_truncNotch_versus_absentNotch
Phenotype	NoPhenotypeAvailable
Upregulated in class	na_pos
GeneSet	V$GFI1_01
Enrichment Score (ES)	0.2793271
Normalized Enrichment Score (NES)	1.3352517
Nominal p-value	0.033898305
FDR q-value	0.53045136
FWER p-Value	1.0

Table: GSEA details [plain text format]
	PROBE	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	AGPAT4	164	4.657	0.0080	Yes
2	HMGA1	184	4.595	0.0236	Yes
3	MAP2K5	350	3.966	0.0290	Yes
4	BRUNOL4	456	3.697	0.0367	Yes
5	USP5	463	3.687	0.0498	Yes
6	BCL9L	542	3.539	0.0584	Yes
7	TCTA	954	2.985	0.0469	Yes
8	PDLIM1	1093	2.838	0.0497	Yes
9	PRKAG1	1192	2.756	0.0543	Yes
10	PTHLH	1236	2.723	0.0619	Yes
11	NRXN3	1252	2.712	0.0709	Yes
12	CAMK2D	1481	2.535	0.0677	Yes
13	CACNB2	1500	2.522	0.0759	Yes
14	GPR17	1505	2.517	0.0848	Yes
15	RPS6KB1	1566	2.477	0.0905	Yes
16	CLMN	1587	2.467	0.0983	Yes
17	SP8	1664	2.417	0.1030	Yes
18	HOXA10	1762	2.351	0.1062	Yes
19	MRGPRF	1824	2.321	0.1113	Yes
20	HOXB3	1837	2.314	0.1191	Yes
21	HIVEP3	1846	2.305	0.1270	Yes
22	CREB5	1852	2.299	0.1351	Yes
23	ANGPT1	1903	2.268	0.1406	Yes
24	HOXB8	1922	2.261	0.1478	Yes
25	ADD3	2084	2.177	0.1469	Yes
26	TSGA10	2093	2.169	0.1544	Yes
27	ELAVL4	2120	2.156	0.1608	Yes
28	BTG1	2162	2.135	0.1663	Yes
29	ATP5G2	2181	2.128	0.1730	Yes
30	WDR23	2238	2.106	0.1776	Yes
31	MAP4K2	2357	2.046	0.1786	Yes
32	CALN1	2414	2.027	0.1829	Yes
33	HOXC8	2420	2.025	0.1900	Yes
34	PPP2R2A	2503	1.987	0.1927	Yes
35	HIST1H1E	2630	1.932	0.1929	Yes
36	ICAM4	2693	1.906	0.1964	Yes
37	ASB4	2712	1.899	0.2023	Yes
38	HIST1H1T	2839	1.845	0.2022	Yes
39	CDX2	2860	1.837	0.2078	Yes
40	DPF3	2862	1.836	0.2144	Yes
41	GRK6	2954	1.797	0.2159	Yes
42	KLF12	2985	1.785	0.2208	Yes
43	RORA	2990	1.783	0.2270	Yes
44	RAB6B	2998	1.780	0.2331	Yes
45	EBF2	3025	1.772	0.2381	Yes
46	NEXN	3144	1.736	0.2380	Yes
47	NR2F2	3177	1.727	0.2425	Yes
48	PHACTR3	3179	1.727	0.2487	Yes
49	ARHGEF2	3233	1.710	0.2520	Yes
50	GPRC5D	3297	1.692	0.2548	Yes
51	TRAF4	3412	1.659	0.2546	Yes
52	HOXB6	3424	1.651	0.2600	Yes
53	RKHD3	3438	1.647	0.2652	Yes
54	CPEB3	3594	1.598	0.2626	Yes
55	SOSTDC1	3680	1.575	0.2637	Yes
56	SOX5	3699	1.569	0.2684	Yes
57	GFRA3	3809	1.534	0.2681	Yes
58	PLCD4	3856	1.523	0.2711	Yes
59	FOXP2	3912	1.508	0.2736	Yes
60	MAP3K3	4089	1.464	0.2693	Yes
61	ETS1	4141	1.449	0.2718	Yes
62	DCX	4151	1.447	0.2766	Yes
63	EXOC7	4417	1.377	0.2672	Yes
64	IL16	4522	1.352	0.2664	Yes
65	PHYHIP	4535	1.349	0.2707	Yes
66	NFIA	4585	1.334	0.2728	Yes
67	HOXA9	4597	1.331	0.2771	Yes
68	BDNF	4682	1.313	0.2773	Yes
69	PCDH8	4732	1.302	0.2793	Yes
70	TCF1	4945	1.250	0.2724	No
71	CCR7	4990	1.238	0.2744	No
72	JMJD1C	5477	1.120	0.2521	No
73	BCL9	5642	1.087	0.2472	No
74	MTMR4	6236	0.967	0.2185	No
75	CHRM1	6442	0.921	0.2107	No
76	DSG3	6448	0.920	0.2138	No
77	RHOA	6482	0.912	0.2153	No
78	SOX9	6596	0.892	0.2124	No
79	ZIC1	6689	0.874	0.2106	No
80	SOX15	6767	0.857	0.2095	No
81	IRF2BP1	6779	0.855	0.2120	No
82	CREM	7022	0.807	0.2018	No
83	DDR2	7432	0.722	0.1822	No
84	HOXC4	7463	0.714	0.1832	No
85	CDON	7566	0.692	0.1801	No
86	HOXA3	7829	0.638	0.1682	No
87	BMP4	7888	0.625	0.1673	No
88	SLC26A3	7936	0.615	0.1670	No
89	GREM1	7954	0.612	0.1683	No
90	C1QTNF7	8072	0.585	0.1641	No
91	GADD45A	8078	0.584	0.1659	No
92	HNRPA0	8493	0.494	0.1452	No
93	TBR1	8530	0.483	0.1450	No
94	HOXA6	8632	0.460	0.1412	No
95	PURA	8668	0.451	0.1410	No
96	SREBF2	8762	0.427	0.1375	No
97	PI15	8794	0.421	0.1373	No
98	DSPP	8884	0.398	0.1339	No
99	CTLA4	8947	0.384	0.1319	No
100	MAP2K7	9128	0.337	0.1234	No
101	GABARAP	9176	0.328	0.1220	No
102	ITSN1	9430	0.277	0.1093	No
103	HOXD10	9500	0.262	0.1065	No
104	EDN1	9510	0.260	0.1070	No
105	NKX2-8	9671	0.219	0.0991	No
106	RKHD1	9747	0.203	0.0957	No
107	CDH6	9810	0.188	0.0931	No
108	BPGM	9868	0.173	0.0906	No
109	POU3F1	10029	0.135	0.0824	No
110	MSR1	10044	0.132	0.0821	No
111	CACNG3	10061	0.128	0.0817	No
112	GRPR	10178	0.097	0.0758	No
113	ZFPM2	10318	0.059	0.0684	No
114	PHF8	10497	0.012	0.0588	No
115	PROCR	10654	-0.023	0.0504	No
116	EVA1	10734	-0.046	0.0463	No
117	SERTAD4	10832	-0.073	0.0413	No
118	ZIC4	10877	-0.081	0.0392	No
119	JPH4	10969	-0.104	0.0347	No
120	CNTN6	11040	-0.123	0.0313	No
121	TLR1	11069	-0.129	0.0303	No
122	HOXD11	11237	-0.172	0.0218	No
123	SGK2	11282	-0.184	0.0201	No
124	MEIS1	11402	-0.211	0.0144	No
125	GAS2	11647	-0.273	0.0021	No
126	TRDN	11738	-0.296	-0.0017	No
127	RARB	11797	-0.316	-0.0037	No
128	PBX1	11859	-0.333	-0.0058	No
129	OTP	11913	-0.345	-0.0074	No
130	PEA15	11975	-0.360	-0.0094	No
131	MEF2C	12142	-0.406	-0.0169	No
132	IRX3	12295	-0.445	-0.0236	No
133	KLF15	12415	-0.480	-0.0283	No
134	AVP	12574	-0.525	-0.0350	No
135	HOXA7	12623	-0.539	-0.0356	No
136	BNC2	12716	-0.569	-0.0385	No
137	SH3BGRL2	12753	-0.577	-0.0384	No
138	CRYZL1	12755	-0.578	-0.0364	No
139	PREP	12761	-0.581	-0.0345	No
140	CGN	12883	-0.611	-0.0389	No
141	CSAD	12890	-0.614	-0.0370	No
142	SPAG7	13232	-0.716	-0.0529	No
143	XPO5	13293	-0.737	-0.0535	No
144	ABCF2	13333	-0.749	-0.0529	No
145	PTEN	13608	-0.829	-0.0648	No
146	TFEC	13665	-0.852	-0.0647	No
147	NGEF	13723	-0.869	-0.0647	No
148	LAMA3	13875	-0.917	-0.0695	No
149	PANK1	14014	-0.962	-0.0735	No
150	DEPDC2	14039	-0.971	-0.0713	No
151	BAI3	14220	-1.034	-0.0773	No
152	PPARGC1B	14350	-1.079	-0.0804	No
153	TFB1M	14401	-1.102	-0.0791	No
154	MYO1C	14532	-1.147	-0.0820	No
155	PPARGC1A	14606	-1.174	-0.0817	No
156	TPBG	14812	-1.254	-0.0883	No
157	LUZP1	14840	-1.268	-0.0852	No
158	SLC25A18	14846	-1.269	-0.0809	No
159	ICAM5	14892	-1.286	-0.0786	No
160	DSCR1L1	14894	-1.287	-0.0740	No
161	TCF4	14964	-1.316	-0.0730	No
162	MAP4K3	15024	-1.348	-0.0713	No
163	ELMO3	15031	-1.352	-0.0668	No
164	PDE4D	15041	-1.357	-0.0623	No
165	TRIM23	15074	-1.369	-0.0591	No
166	PRIMA1	15306	-1.475	-0.0663	No
167	CDH13	15436	-1.530	-0.0677	No
168	ATF2	15554	-1.588	-0.0683	No
169	TMPRSS2	15680	-1.646	-0.0692	No
170	CNKSR1	15712	-1.664	-0.0648	No
171	GPR20	15862	-1.740	-0.0666	No
172	MCTS1	15943	-1.792	-0.0644	No
173	MYH10	15992	-1.822	-0.0604	No
174	DNAJB4	16359	-2.049	-0.0729	No
175	SOX4	16485	-2.128	-0.0719	No
176	ZIC3	16516	-2.160	-0.0657	No
177	PDC	16777	-2.328	-0.0714	No
178	STMN1	16796	-2.349	-0.0639	No
179	TCF12	16830	-2.371	-0.0571	No
180	TOP1	16952	-2.462	-0.0547	No
181	YWHAE	17045	-2.534	-0.0505	No
182	HSD11B1	17185	-2.668	-0.0484	No
183	NCAM1	17330	-2.800	-0.0461	No
184	HBP1	17690	-3.155	-0.0541	No
185	POLH	17777	-3.265	-0.0470	No
186	SFRS2	17780	-3.269	-0.0352	No
187	MBNL1	17821	-3.320	-0.0254	No
188	ITGA10	17827	-3.326	-0.0136	No
189	BRD2	17834	-3.336	-0.0018	No
190	TLK1	18106	-3.763	-0.0029	No
191	SLC4A7	18208	-3.959	0.0060	No
192	BCL6	18391	-4.442	0.0122	No