Details for gene set V$E2F

Table: GSEA Results Summary

Dataset	set03_truncNotch_versus_absentNotch
Phenotype	NoPhenotypeAvailable
Upregulated in class	na_neg
GeneSet	V$E2F_Q4
Enrichment Score (ES)	-0.4638455
Normalized Enrichment Score (NES)	-2.2059124
Nominal p-value	0.0
FDR q-value	0.0
FWER p-Value	0.0

Table: GSEA details [plain text format]
	PROBE	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	DDB2	42	5.775	0.0171	No
2	HTF9C	101	5.047	0.0308	No
3	HIST1H2BK	836	3.102	0.0014	No
4	HIRA	973	2.964	0.0040	No
5	NELL2	1301	2.679	-0.0048	No
6	UNG	1413	2.589	-0.0021	No
7	MAZ	1484	2.534	0.0026	No
8	SEMA5A	1885	2.281	-0.0114	No
9	YBX2	2495	1.990	-0.0378	No
10	MXD3	2603	1.943	-0.0371	No
11	TBX6	3039	1.768	-0.0547	No
12	SYNGR4	3066	1.758	-0.0502	No
13	POLD1	3106	1.748	-0.0465	No
14	TYRO3	3359	1.671	-0.0545	No
15	UXT	3388	1.664	-0.0505	No
16	PAQR4	3397	1.661	-0.0454	No
17	PVRL1	3491	1.630	-0.0449	No
18	KCNA6	3561	1.608	-0.0433	No
19	EPHB1	3738	1.556	-0.0476	No
20	AP4M1	3906	1.509	-0.0516	No
21	ACBD6	4119	1.454	-0.0582	No
22	NRP2	4193	1.437	-0.0574	No
23	CASP8AP2	4264	1.418	-0.0564	No
24	HCN3	4346	1.395	-0.0561	No
25	ADAMTS2	4375	1.388	-0.0530	No
26	MCM8	4498	1.357	-0.0551	No
27	POLR2A	4625	1.325	-0.0575	No
28	KCND2	4938	1.252	-0.0702	No
29	PODN	4952	1.248	-0.0667	No
30	DNAJC9	5167	1.195	-0.0743	No
31	POLE2	5199	1.186	-0.0720	No
32	WNT3	5398	1.139	-0.0789	No
33	ARID4A	5408	1.137	-0.0756	No
34	STK35	5473	1.121	-0.0753	No
35	ZBTB4	5592	1.096	-0.0780	No
36	USP52	5614	1.093	-0.0755	No
37	CDC45L	5635	1.089	-0.0730	No
38	AK2	6011	1.013	-0.0899	No
39	MRPL40	6030	1.010	-0.0875	No
40	CRK	6133	0.986	-0.0897	No
41	ATF5	6158	0.981	-0.0877	No
42	IPO7	6222	0.968	-0.0879	No
43	PAX6	6396	0.930	-0.0941	No
44	HOXC10	6478	0.914	-0.0955	No
45	PHF15	6741	0.863	-0.1068	No
46	HNRPR	7002	0.811	-0.1181	No
47	CBX5	7193	0.773	-0.1258	No
48	PHF13	7696	0.667	-0.1508	No
49	TREX2	7777	0.650	-0.1530	No
50	CORT	8152	0.568	-0.1713	No
51	ABI2	8264	0.543	-0.1755	No
52	NUP62	8740	0.433	-0.1998	No
53	EFNA5	8849	0.407	-0.2043	No
54	INSM1	8978	0.375	-0.2099	No
55	GABRB3	9366	0.288	-0.2299	No
56	PIM1	9387	0.285	-0.2301	No
57	IL4I1	9455	0.271	-0.2328	No
58	ARHGAP6	9564	0.247	-0.2378	No
59	NUP153	10151	0.107	-0.2692	No
60	FBXO5	10171	0.100	-0.2699	No
61	HMGN2	10306	0.061	-0.2769	No
62	MCM2	10789	-0.062	-0.3028	No
63	RQCD1	10930	-0.094	-0.3101	No
64	RHD	11191	-0.160	-0.3237	No
65	POLA2	11222	-0.166	-0.3247	No
66	SMAD6	11387	-0.207	-0.3329	No
67	JPH1	11510	-0.236	-0.3387	No
68	FHOD1	11556	-0.248	-0.3403	No
69	SLC6A4	11710	-0.288	-0.3477	No
70	PPP1R8	11852	-0.333	-0.3542	No
71	GPRC5B	12038	-0.380	-0.3629	No
72	GRIA4	12359	-0.466	-0.3787	No
73	RPS6KA5	12586	-0.528	-0.3892	No
74	MSH2	12712	-0.567	-0.3941	No
75	MCM7	13115	-0.680	-0.4136	No
76	FMO4	13349	-0.754	-0.4237	No
77	MCM3	13442	-0.780	-0.4260	No
78	CDT1	13457	-0.785	-0.4242	No
79	RAB11B	13534	-0.808	-0.4256	No
80	DMD	13707	-0.863	-0.4320	No
81	STAG2	13758	-0.881	-0.4317	No
82	CHD2	13845	-0.907	-0.4334	No
83	TOPBP1	13901	-0.926	-0.4333	No
84	SLC38A1	13907	-0.928	-0.4304	No
85	SNRPD1	14126	-1.004	-0.4389	No
86	HIST1H2AH	14261	-1.048	-0.4426	No
87	E2F7	14266	-1.050	-0.4393	No
88	PPP1CC	14433	-1.114	-0.4446	No
89	SFRS7	14444	-1.118	-0.4414	No
90	NOLC1	14501	-1.135	-0.4406	No
91	PCSK1	14575	-1.163	-0.4407	No
92	ING3	14674	-1.204	-0.4420	No
93	SP3	14945	-1.311	-0.4522	No
94	PHF5A	15018	-1.345	-0.4516	No
95	HNRPD	15203	-1.430	-0.4568	No
96	E2F1	15267	-1.457	-0.4553	No
97	HS6ST3	15301	-1.474	-0.4522	No
98	GMNN	15419	-1.524	-0.4534	No
99	CDC6	15613	-1.614	-0.4584	Yes
100	PRKDC	15641	-1.628	-0.4545	Yes
101	EZH2	15777	-1.693	-0.4561	Yes
102	ERBB2IP	15790	-1.704	-0.4510	Yes
103	DNAJC11	15846	-1.732	-0.4482	Yes
104	PRPS1	15920	-1.779	-0.4462	Yes
105	MYH10	15992	-1.822	-0.4440	Yes
106	UFD1L	16017	-1.845	-0.4391	Yes
107	CDC25A	16402	-2.075	-0.4530	Yes
108	NCL	16426	-2.089	-0.4472	Yes
109	STAG1	16457	-2.109	-0.4418	Yes
110	USP37	16481	-2.126	-0.4359	Yes
111	RAD51	16527	-2.166	-0.4311	Yes
112	E2F3	16574	-2.193	-0.4262	Yes
113	WEE1	16673	-2.258	-0.4240	Yes
114	STMN1	16796	-2.349	-0.4227	Yes
115	HNRPUL1	16880	-2.408	-0.4192	Yes
116	HNRPA1	16925	-2.440	-0.4134	Yes
117	ACO2	16944	-2.457	-0.4061	Yes
118	DNMT1	17084	-2.569	-0.4051	Yes
119	H2AFZ	17127	-2.601	-0.3986	Yes
120	ASXL2	17137	-2.617	-0.3904	Yes
121	SFRS10	17151	-2.636	-0.3823	Yes
122	MCM6	17467	-2.920	-0.3895	Yes
123	ALDH6A1	17536	-3.007	-0.3832	Yes
124	POLE4	17597	-3.061	-0.3762	Yes
125	POLD3	17751	-3.229	-0.3736	Yes
126	FANCD2	17761	-3.244	-0.3633	Yes
127	SFRS2	17780	-3.269	-0.3533	Yes
128	PCNA	17864	-3.379	-0.3465	Yes
129	ILF3	17878	-3.408	-0.3358	Yes
130	RANBP1	17962	-3.537	-0.3284	Yes
131	MCM4	17966	-3.547	-0.3167	Yes
132	ATAD2	18055	-3.679	-0.3092	Yes
133	CLSPN	18101	-3.757	-0.2990	Yes
134	GSPT1	18192	-3.914	-0.2908	Yes
135	UGCGL1	18213	-3.968	-0.2786	Yes
136	SLCO3A1	18223	-3.989	-0.2658	Yes
137	RBL1	18226	-3.996	-0.2525	Yes
138	KPNB1	18242	-4.033	-0.2398	Yes
139	CCNT1	18265	-4.084	-0.2273	Yes
140	SUMO1	18274	-4.114	-0.2140	Yes
141	EED	18339	-4.265	-0.2032	Yes
142	NASP	18399	-4.468	-0.1914	Yes
143	SFRS1	18407	-4.486	-0.1768	Yes
144	SOAT1	18410	-4.513	-0.1618	Yes
145	CDCA7	18429	-4.580	-0.1474	Yes
146	DCK	18439	-4.612	-0.1325	Yes
147	PHC1	18449	-4.644	-0.1174	Yes
148	CTCF	18467	-4.689	-0.1027	Yes
149	BRMS1L	18487	-4.772	-0.0877	Yes
150	TMPO	18492	-4.809	-0.0718	Yes
151	RRM2	18548	-5.276	-0.0572	Yes
152	ZCCHC8	18576	-5.707	-0.0395	Yes
153	PPM1D	18580	-5.779	-0.0203	Yes
154	EPC1	18603	-6.642	0.0007	Yes