Details for gene set CELL_CYCLE

Table: GSEA Results Summary

Dataset	Set_03_truncNotch_versus_wtNotch.phenotype_truncNotch_versus_wtNotch.cls #wtNotch_versus_truncNotch.phenotype_truncNotch_versus_wtNotch.cls #wtNotch_versus_truncNotch_repos
Phenotype	phenotype_truncNotch_versus_wtNotch.cls#wtNotch_versus_truncNotch_repos
Upregulated in class	wtNotch
GeneSet	CELL_CYCLE_PROCESS
Enrichment Score (ES)	0.54264
Normalized Enrichment Score (NES)	1.6852595
Nominal p-value	0.0031746032
FDR q-value	0.28846008
FWER p-Value	0.695

Table: GSEA details [plain text format]
	PROBE	DESCRIPTION (from dataset)	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	NCAPH	6220435	56	3.183	0.0252	Yes
2	AKAP8	4210026	57	3.171	0.0534	Yes
3	KPNA2	3450114	125	2.781	0.0744	Yes
4	BUB1B	1450288	261	2.413	0.0886	Yes
5	POLE	6020538	265	2.398	0.1097	Yes
6	ANAPC4	4540338	272	2.384	0.1305	Yes
7	MAD2L1	4480725	273	2.379	0.1516	Yes
8	TPX2	6420324	306	2.306	0.1704	Yes
9	RB1	5900338	390	2.152	0.1850	Yes
10	POLS	5890438	424	2.095	0.2018	Yes
11	CUL3	1850520	446	2.066	0.2190	Yes
12	SKP2	360711 380093 4810368	483	2.012	0.2349	Yes
13	ANAPC5	730164 7100685	597	1.862	0.2453	Yes
14	NUSAP1	940048 3120435	714	1.733	0.2544	Yes
15	CDC7	4060546 4850041	725	1.718	0.2692	Yes
16	CUL1	1990632	772	1.677	0.2816	Yes
17	PTPRC	130402 5290148	788	1.663	0.2955	Yes
18	PPP6C	2450670	840	1.613	0.3071	Yes
19	NDC80	4120465	867	1.583	0.3197	Yes
20	CETN3	3170402	948	1.485	0.3286	Yes
21	ZWINT	6940670	954	1.481	0.3414	Yes
22	PRC1	870092 5890204	962	1.472	0.3541	Yes
23	KIF23	5570112	1019	1.409	0.3636	Yes
24	GSPT1	5420050	1023	1.408	0.3759	Yes
25	CDKN1C	6520577	1081	1.353	0.3849	Yes
26	MPHOSPH6	5570164	1179	1.259	0.3908	Yes
27	LIG3	2940300	1266	1.187	0.3967	Yes
28	KHDRBS1	1240403 6040040	1297	1.152	0.4053	Yes
29	HSPA2	6420592	1304	1.149	0.4151	Yes
30	AURKA	780537	1317	1.140	0.4246	Yes
31	SMC1A	3060600 5700148 5890113 6370154	1333	1.130	0.4338	Yes
32	ZW10	2900735 3520687	1362	1.103	0.4421	Yes
33	CDKN2A	4670215 4760047	1380	1.090	0.4509	Yes
34	TIPIN	1570301 2480113	1432	1.048	0.4574	Yes
35	PCBP4	6350722	1563	0.991	0.4591	Yes
36	CD28	1400739 4210093	1578	0.983	0.4671	Yes
37	CDC16	1940706	1589	0.980	0.4753	Yes
38	KNTC1	430079	1652	0.940	0.4803	Yes
39	RAD51L3	2230609 2810286 3190008 3390053 4230168	1703	0.906	0.4856	Yes
40	RAD21	1990278	1781	0.856	0.4890	Yes
41	BIRC5	110408 580014 1770632	1894	0.790	0.4900	Yes
42	ABL1	1050593 2030050 4010114	1898	0.789	0.4968	Yes
43	CDK2AP1	2340156	1928	0.770	0.5021	Yes
44	DLG7	3120041	1942	0.763	0.5082	Yes
45	MRE11A	3850601 4670332	1958	0.748	0.5140	Yes
46	NDE1	1580242 3830097	2027	0.703	0.5165	Yes
47	CDC6	4570296 5360600	2159	0.641	0.5151	Yes
48	STMN1	1990717	2167	0.636	0.5204	Yes
49	CCNA2	5290075	2176	0.634	0.5256	Yes
50	MYH10	2640673	2217	0.614	0.5289	Yes
51	RAD50	4050184 6770746	2314	0.577	0.5288	Yes
52	SUGT1	1690670	2430	0.532	0.5273	Yes
53	CIT	2370601	2435	0.528	0.5318	Yes
54	SMC4	5910240	2448	0.524	0.5358	Yes
55	EGF	5220154	2474	0.515	0.5390	Yes
56	CUL4A	1170088 2320008 2470278	2506	0.504	0.5418	Yes
57	SSSCA1	1240402 780309	2608	0.469	0.5405	Yes
58	XRCC2	4920706	2644	0.458	0.5426	Yes
59	PPP5C	3130047	2795	0.409	0.5381	No
60	NOLC1	2350195	2875	0.381	0.5372	No
61	GFI1	730180	2907	0.371	0.5389	No
62	KIF22	1190368	3067	0.321	0.5331	No
63	LATS2	4480593 6020494	3166	0.294	0.5304	No
64	RAD17	5220739	3194	0.288	0.5315	No
65	CDK2	130484 2260301 4010088 5050110	3216	0.284	0.5329	No
66	TUBG1	3140204	3242	0.280	0.5340	No
67	BRCA2	4280372	3259	0.274	0.5356	No
68	ACVR1B	3610446 5570195	3271	0.272	0.5374	No
69	RAD51	6110450 6980280	3499	0.225	0.5271	No
70	RAD51L1	4010112 5860435	3548	0.213	0.5264	No
71	GFI1B	4570131	3607	0.204	0.5250	No
72	PIN1	2970408	3758	0.180	0.5185	No
73	TGFA	1570332	3820	0.172	0.5167	No
74	SMC3	870546 1400411 5700039 6450577	3910	0.158	0.5133	No
75	NPM2	6040139	4003	0.148	0.5096	No
76	CDKN1B	3800025 6450044	4044	0.142	0.5087	No
77	DDX11	6590671	4135	0.133	0.5050	No
78	CDC25C	2570673 4760161 6520707	4241	0.124	0.5005	No
79	USH1C	1570372 4230364	4394	0.110	0.4932	No
80	PML	50093 2190435 2450402 3840082	4633	0.093	0.4811	No
81	FBXO5	2630551	4653	0.092	0.4809	No
82	TUBE1	2360079 6520685	4664	0.091	0.4812	No
83	ATM	3610110 4050524	4686	0.090	0.4808	No
84	DCTN3	6840131	4767	0.085	0.4773	No
85	SYCP1	2570010	4855	0.080	0.4733	No
86	PIM2	840136 5720692 7100577	4931	0.076	0.4699	No
87	CDC23	3190593	5157	0.066	0.4583	No
88	KIF15	610731 4070731 6520014	5200	0.064	0.4566	No
89	NBN	730538 2470619 4780594	5294	0.060	0.4521	No
90	CHEK1	50167 1940300	5327	0.059	0.4508	No
91	EPGN	6980450	5333	0.059	0.4511	No
92	RAD52	110093	5862	0.041	0.4229	No
93	TTK	3800129	6467	0.026	0.3904	No
94	SPO11	540288 4780239	6593	0.023	0.3838	No
95	CENPF	5050088	6665	0.022	0.3801	No
96	PAM	5290528	6751	0.020	0.3757	No
97	ANAPC10	870086 1170037 2260129	6773	0.019	0.3747	No
98	RAN	2260446 4590647	6789	0.019	0.3741	No
99	CDKN1A	4050088 6400706	6815	0.019	0.3729	No
100	KIF2C	6940082	6866	0.018	0.3704	No
101	MDM4	4070504 4780008	7308	0.010	0.3466	No
102	CCNA1	6290113	7823	0.001	0.3187	No
103	EREG	50519 4920129	7933	-0.001	0.3128	No
104	BUB1	5390270	8457	-0.009	0.2846	No
105	MSH4	3940068	8994	-0.018	0.2557	No
106	POLA1	4760541	9007	-0.018	0.2552	No
107	NPM1	4730427	9124	-0.020	0.2491	No
108	KIF11	5390139	9371	-0.025	0.2360	No
109	TIMELESS	3710315	10080	-0.038	0.1980	No
110	CDKN3	110520	10134	-0.039	0.1954	No
111	TTN	2320161 4670056 6550026	10145	-0.039	0.1952	No
112	PRMT5	2760180 4590072	10509	-0.047	0.1760	No
113	CETN1	6020056	10660	-0.050	0.1683	No
114	APBB2	5130403	10683	-0.051	0.1676	No
115	KATNA1	6290048	10704	-0.051	0.1669	No
116	NEK2	2120520	10893	-0.056	0.1572	No
117	PAFAH1B1	4230333 6420121 6450066	11397	-0.070	0.1306	No
118	CLIP1	2850162 6770397	11827	-0.084	0.1081	No
119	DMC1	450341	12054	-0.092	0.0967	No
120	CUL5	450142	12089	-0.094	0.0957	No
121	NEK6	3360687	12419	-0.109	0.0788	No
122	RAD1	4200551	12723	-0.125	0.0635	No
123	CENPE	2850022	12747	-0.126	0.0634	No
124	TBRG4	3610239 6370594	12866	-0.133	0.0582	No
125	CDCA5	5670131	13200	-0.156	0.0415	No
126	PLK1	1780369 2640121	13227	-0.159	0.0415	No
127	UBE2C	6130017	13412	-0.173	0.0331	No
128	ANLN	1780113 2470537 6840047	13567	-0.187	0.0264	No
129	CDKN2B	6020040	13572	-0.187	0.0278	No
130	ANAPC11	1780601	13588	-0.189	0.0287	No
131	DUSP13	6400152	13809	-0.211	0.0187	No
132	ACVR1	6840671	13964	-0.228	0.0123	No
133	RCC1	2480358	14128	-0.246	0.0057	No
134	TPD52L1	4590711 5570575	14225	-0.260	0.0028	No
135	RAD54L	2970041	14358	-0.276	-0.0019	No
136	CUL2	4200278	14495	-0.298	-0.0066	No
137	DCTN2	540471 3780717	14688	-0.333	-0.0141	No
138	CDKN2D	6040035	14900	-0.370	-0.0222	No
139	CENTD2	60408 2510156 6100494	15112	-0.415	-0.0300	No
140	APBB1	2690338	15141	-0.422	-0.0277	No
141	RACGAP1	3990162 6620736	15208	-0.437	-0.0274	No
142	CDK6	4920253	15335	-0.469	-0.0301	No
143	TOP3A	7000435	15350	-0.476	-0.0266	No
144	E2F1	5360093	15379	-0.483	-0.0239	No
145	BOLL	6100743	15568	-0.545	-0.0292	No
146	NUMA1	6520576	15578	-0.548	-0.0248	No
147	TGFB1	1940162	15749	-0.610	-0.0286	No
148	STAG3	3830112	15933	-0.682	-0.0325	No
149	CDKN2C	5050750 5130148	15989	-0.707	-0.0292	No
150	TARDBP	870390 2350093	16452	-0.917	-0.0461	No
151	POLD1	4830026	16821	-1.079	-0.0564	No
152	MAP3K11	7000039	17023	-1.210	-0.0566	No
153	CHFR	3390050 6450300 6450736	17127	-1.272	-0.0509	No
154	CDC25B	6940102	17519	-1.538	-0.0584	No
155	CHMP1A	5550441	17651	-1.647	-0.0509	No
156	MSH5	1340019 4730333	17655	-1.651	-0.0364	No
157	MAD2L2	1240358	17788	-1.784	-0.0277	No
158	CDK4	540075 4540600	18101	-2.120	-0.0258	No
159	BCAT1	3290128 4050408	18470	-2.890	-0.0200	No
160	CDK10	60164 1190717 3130128 3990044	18523	-3.142	0.0050	No