Details for gene set CELL_CYCLE_GO

Table: GSEA Results Summary

Dataset	Set_03_truncNotch_versus_wtNotch.phenotype_truncNotch_versus_wtNotch.cls #wtNotch_versus_truncNotch.phenotype_truncNotch_versus_wtNotch.cls #wtNotch_versus_truncNotch_repos
Phenotype	phenotype_truncNotch_versus_wtNotch.cls#wtNotch_versus_truncNotch_repos
Upregulated in class	wtNotch
GeneSet	CELL_CYCLE_GO_0007049
Enrichment Score (ES)	0.49356252
Normalized Enrichment Score (NES)	1.6201555
Nominal p-value	0.0
FDR q-value	0.28862822
FWER p-Value	0.944

Table: GSEA details [plain text format]
	PROBE	DESCRIPTION (from dataset)	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	NCAPH	6220435	56	3.183	0.0153	Yes
2	AKAP8	4210026	57	3.171	0.0337	Yes
3	KPNA2	3450114	125	2.781	0.0461	Yes
4	RABGAP1	5050397	236	2.466	0.0543	Yes
5	BUB1B	1450288	261	2.413	0.0669	Yes
6	POLE	6020538	265	2.398	0.0806	Yes
7	GTPBP4	6840332	269	2.393	0.0943	Yes
8	ANAPC4	4540338	272	2.384	0.1080	Yes
9	MAD2L1	4480725	273	2.379	0.1217	Yes
10	NASP	2260139 2940369 5130707	298	2.326	0.1338	Yes
11	TPX2	6420324	306	2.306	0.1468	Yes
12	CCND1	460524 770309 3120576 6980398	346	2.224	0.1575	Yes
13	RB1	5900338	390	2.152	0.1676	Yes
14	POLS	5890438	424	2.095	0.1779	Yes
15	CUL3	1850520	446	2.066	0.1887	Yes
16	HCFC1	2260008	463	2.041	0.1996	Yes
17	SKP2	360711 380093 4810368	483	2.012	0.2102	Yes
18	SESN1	2120021	536	1.926	0.2185	Yes
19	ANAPC5	730164 7100685	597	1.862	0.2260	Yes
20	NUSAP1	940048 3120435	714	1.733	0.2296	Yes
21	CDC7	4060546 4850041	725	1.718	0.2390	Yes
22	CUL1	1990632	772	1.677	0.2462	Yes
23	PTPRC	130402 5290148	788	1.663	0.2550	Yes
24	MNAT1	730292 2350364	831	1.616	0.2620	Yes
25	PPP6C	2450670	840	1.613	0.2709	Yes
26	ATR	6860273	844	1.606	0.2800	Yes
27	NDC80	4120465	867	1.583	0.2880	Yes
28	CETN3	3170402	948	1.485	0.2922	Yes
29	ZWINT	6940670	954	1.481	0.3005	Yes
30	PRC1	870092 5890204	962	1.472	0.3086	Yes
31	KIF23	5570112	1019	1.409	0.3137	Yes
32	GSPT1	5420050	1023	1.408	0.3217	Yes
33	CCNE2	3120537	1049	1.388	0.3283	Yes
34	CDKN1C	6520577	1081	1.353	0.3344	Yes
35	MPHOSPH6	5570164	1179	1.259	0.3364	Yes
36	LIG3	2940300	1266	1.187	0.3386	Yes
37	CDT1	3780682	1268	1.186	0.3454	Yes
38	KHDRBS1	1240403 6040040	1297	1.152	0.3505	Yes
39	HSPA2	6420592	1304	1.149	0.3568	Yes
40	AURKA	780537	1317	1.140	0.3628	Yes
41	SMC1A	3060600 5700148 5890113 6370154	1333	1.130	0.3685	Yes
42	ZW10	2900735 3520687	1362	1.103	0.3733	Yes
43	CDKN2A	4670215 4760047	1380	1.090	0.3787	Yes
44	USP16	2030671	1388	1.082	0.3846	Yes
45	PTEN	3390064	1409	1.066	0.3896	Yes
46	TIPIN	1570301 2480113	1432	1.048	0.3945	Yes
47	PCBP4	6350722	1563	0.991	0.3931	Yes
48	CD28	1400739 4210093	1578	0.983	0.3980	Yes
49	CDC16	1940706	1589	0.980	0.4031	Yes
50	KNTC1	430079	1652	0.940	0.4052	Yes
51	EIF4G2	3800575 6860184	1689	0.918	0.4085	Yes
52	GMNN	2630148	1691	0.916	0.4138	Yes
53	RAD51L3	2230609 2810286 3190008 3390053 4230168	1703	0.906	0.4184	Yes
54	RAD21	1990278	1781	0.856	0.4192	Yes
55	PCAF	2230161 2570369 6550451	1851	0.812	0.4201	Yes
56	BIRC5	110408 580014 1770632	1894	0.790	0.4224	Yes
57	ABL1	1050593 2030050 4010114	1898	0.789	0.4268	Yes
58	CDK2AP1	2340156	1928	0.770	0.4296	Yes
59	DLG7	3120041	1942	0.763	0.4333	Yes
60	CDK5R1	3870161	1949	0.758	0.4374	Yes
61	MRE11A	3850601 4670332	1958	0.748	0.4413	Yes
62	CDC37	2570537	1969	0.742	0.4450	Yes
63	CCNG2	3190095	1989	0.734	0.4482	Yes
64	TBRG1	6110678 6520181	1993	0.729	0.4523	Yes
65	NDE1	1580242 3830097	2027	0.703	0.4545	Yes
66	CDC45L	70537 3130114	2050	0.690	0.4573	Yes
67	CDC6	4570296 5360600	2159	0.641	0.4551	Yes
68	MADD	6100725 7000088	2162	0.638	0.4587	Yes
69	CCND3	380528 730500	2164	0.637	0.4623	Yes
70	STMN1	1990717	2167	0.636	0.4659	Yes
71	CCNA2	5290075	2176	0.634	0.4691	Yes
72	CDC25A	3800184	2212	0.617	0.4708	Yes
73	MYH10	2640673	2217	0.614	0.4741	Yes
74	RAD50	4050184 6770746	2314	0.577	0.4722	Yes
75	RASSF1	2760364 4850725	2324	0.574	0.4750	Yes
76	ING4	510632 2340619 2850176 5290706	2368	0.554	0.4759	Yes
77	ERCC3	6900008	2382	0.551	0.4784	Yes
78	HUS1	3440494 3800156	2429	0.533	0.4789	Yes
79	SUGT1	1690670	2430	0.532	0.4820	Yes
80	CIT	2370601	2435	0.528	0.4848	Yes
81	SMC4	5910240	2448	0.524	0.4872	Yes
82	EGF	5220154	2474	0.515	0.4888	Yes
83	CUL4A	1170088 2320008 2470278	2506	0.504	0.4900	Yes
84	APC	3850484 5860722	2589	0.475	0.4883	Yes
85	STRN3	1450093 6200685	2598	0.471	0.4906	Yes
86	SSSCA1	1240402 780309	2608	0.469	0.4928	Yes
87	XRCC2	4920706	2644	0.458	0.4936	Yes
88	GTF2H1	2570746 2650148	2751	0.423	0.4902	No
89	PPP5C	3130047	2795	0.409	0.4902	No
90	NOLC1	2350195	2875	0.381	0.4881	No
91	GFI1	730180	2907	0.371	0.4886	No
92	AIF1	130332 5220017	2913	0.369	0.4905	No
93	KIF22	1190368	3067	0.321	0.4840	No
94	LATS2	4480593 6020494	3166	0.294	0.4803	No
95	RAD17	5220739	3194	0.288	0.4805	No
96	CDK2	130484 2260301 4010088 5050110	3216	0.284	0.4810	No
97	TUBG1	3140204	3242	0.280	0.4813	No
98	BRCA2	4280372	3259	0.274	0.4820	No
99	ACVR1B	3610446 5570195	3271	0.272	0.4830	No
100	UBB	4810138	3327	0.260	0.4815	No
101	RAD51	6110450 6980280	3499	0.225	0.4734	No
102	RAD51L1	4010112 5860435	3548	0.213	0.4721	No
103	GFI1B	4570131	3607	0.204	0.4701	No
104	GAS7	2120358 6450494	3737	0.183	0.4641	No
105	PIN1	2970408	3758	0.180	0.4640	No
106	TGFA	1570332	3820	0.172	0.4617	No
107	SMC3	870546 1400411 5700039 6450577	3910	0.158	0.4578	No
108	NPM2	6040139	4003	0.148	0.4536	No
109	MAP2K6	1230056 2940204	4023	0.145	0.4534	No
110	ERN1	2360403	4031	0.143	0.4539	No
111	CDKN1B	3800025 6450044	4044	0.142	0.4540	No
112	CCNG1	870402 1500685 6110594	4108	0.135	0.4514	No
113	DDX11	6590671	4135	0.133	0.4507	No
114	NOTCH2	2570397	4149	0.131	0.4508	No
115	SH3BP4	3140242	4155	0.131	0.4513	No
116	CDC25C	2570673 4760161 6520707	4241	0.124	0.4474	No
117	CCNT2	2100390 4150563	4381	0.111	0.4404	No
118	USH1C	1570372 4230364	4394	0.110	0.4404	No
119	PML	50093 2190435 2450402 3840082	4633	0.093	0.4280	No
120	FBXO5	2630551	4653	0.092	0.4275	No
121	TUBE1	2360079 6520685	4664	0.091	0.4275	No
122	ATM	3610110 4050524	4686	0.090	0.4268	No
123	UPF1	430164 1190750	4728	0.087	0.4251	No
124	DCTN3	6840131	4767	0.085	0.4235	No
125	SYCP1	2570010	4855	0.080	0.4192	No
126	PIM2	840136 5720692 7100577	4931	0.076	0.4156	No
127	CDC23	3190593	5157	0.066	0.4037	No
128	KIF15	610731 4070731 6520014	5200	0.064	0.4018	No
129	NBN	730538 2470619 4780594	5294	0.060	0.3971	No
130	CHEK1	50167 1940300	5327	0.059	0.3957	No
131	EPGN	6980450	5333	0.059	0.3957	No
132	CCNK	6980048	5366	0.057	0.3943	No
133	UHRF2	60050 840280 1340746 5080091	5533	0.051	0.3856	No
134	GPS2	5910672	5720	0.045	0.3757	No
135	RAD52	110093	5862	0.041	0.3683	No
136	GAS1	2120504	5869	0.041	0.3682	No
137	BMP4	380113	6000	0.037	0.3613	No
138	MYC	380541 4670170	6382	0.028	0.3407	No
139	TTK	3800129	6467	0.026	0.3363	No
140	SPO11	540288 4780239	6593	0.023	0.3296	No
141	CENPF	5050088	6665	0.022	0.3258	No
142	PAM	5290528	6751	0.020	0.3213	No
143	ANAPC10	870086 1170037 2260129	6773	0.019	0.3203	No
144	RAN	2260446 4590647	6789	0.019	0.3196	No
145	CDKN1A	4050088 6400706	6815	0.019	0.3183	No
146	RAD9A	110300 1940632 3990390 6040014	6846	0.018	0.3168	No
147	KIF2C	6940082	6866	0.018	0.3159	No
148	MLF1	4570722	7190	0.012	0.2983	No
149	MDM4	4070504 4780008	7308	0.010	0.2920	No
150	BTG3	7050079	7663	0.004	0.2727	No
151	JMY	3360242	7741	0.003	0.2686	No
152	DHRS2	4200577	7750	0.002	0.2681	No
153	CCNA1	6290113	7823	0.001	0.2642	No
154	EREG	50519 4920129	7933	-0.001	0.2583	No
155	BUB1	5390270	8457	-0.009	0.2298	No
156	CCND2	5340167	8718	-0.014	0.2158	No
157	MSH4	3940068	8994	-0.018	0.2009	No
158	POLA1	4760541	9007	-0.018	0.2003	No
159	NPM1	4730427	9124	-0.020	0.1941	No
160	EGFL6	3940181	9267	-0.023	0.1865	No
161	FOXC1	580239	9302	-0.024	0.1848	No
162	KIF11	5390139	9371	-0.025	0.1812	No
163	CKS2	1410156	9553	-0.028	0.1715	No
164	TIMELESS	3710315	10080	-0.038	0.1431	No
165	CDKN3	110520	10134	-0.039	0.1404	No
166	TTN	2320161 4670056 6550026	10145	-0.039	0.1401	No
167	ALOX15B	450736	10218	-0.040	0.1364	No
168	INHA	6100102	10284	-0.042	0.1331	No
169	BMP2	6620687	10322	-0.042	0.1313	No
170	PRMT5	2760180 4590072	10509	-0.047	0.1215	No
171	SNF1LK	6110403	10563	-0.048	0.1189	No
172	CETN1	6020056	10660	-0.050	0.1139	No
173	PPP1R9B	3130619	10678	-0.051	0.1133	No
174	APBB2	5130403	10683	-0.051	0.1134	No
175	KATNA1	6290048	10704	-0.051	0.1126	No
176	RPRM	1580706	10761	-0.053	0.1098	No
177	CDK7	2640451	10877	-0.056	0.1039	No
178	NEK2	2120520	10893	-0.056	0.1034	No
179	HERC5	4280687	11223	-0.065	0.0858	No
180	PAFAH1B1	4230333 6420121 6450066	11397	-0.070	0.0768	No
181	CDK5R2	3800110	11457	-0.072	0.0740	No
182	GPS1	2470037 4760315 6200528 7100040	11635	-0.077	0.0648	No
183	XPC	6370193	11703	-0.079	0.0616	No
184	BTG4	4060020	11764	-0.082	0.0588	No
185	CLIP1	2850162 6770397	11827	-0.084	0.0559	No
186	TGFB2	4920292	11864	-0.085	0.0545	No
187	DMC1	450341	12054	-0.092	0.0447	No
188	CUL5	450142	12089	-0.094	0.0434	No
189	NEK6	3360687	12419	-0.109	0.0261	No
190	SPHK1	2470113 4230398 6220397	12538	-0.115	0.0203	No
191	ANAPC2	6660438	12550	-0.116	0.0204	No
192	PPP1R13B	4010605 4760181	12552	-0.116	0.0210	No
193	RUNX3	3800546	12636	-0.121	0.0172	No
194	RAD1	4200551	12723	-0.125	0.0132	No
195	CENPE	2850022	12747	-0.126	0.0127	No
196	TBRG4	3610239 6370594	12866	-0.133	0.0070	No
197	CCNT1	2450563 5390184	13093	-0.149	-0.0044	No
198	CDCA5	5670131	13200	-0.156	-0.0093	No
199	PLK1	1780369 2640121	13227	-0.159	-0.0098	No
200	FANCG	4010471	13265	-0.161	-0.0109	No
201	UBE2C	6130017	13412	-0.173	-0.0178	No
202	AHR	4560671	13546	-0.185	-0.0240	No
203	ANLN	1780113 2470537 6840047	13567	-0.187	-0.0240	No
204	CDKN2B	6020040	13572	-0.187	-0.0232	No
205	ANAPC11	1780601	13588	-0.189	-0.0229	No
206	DLG1	2630091 6020286	13610	-0.191	-0.0229	No
207	DUSP13	6400152	13809	-0.211	-0.0325	No
208	CITED2	5670114 5130088	13832	-0.213	-0.0325	No
209	ACVR1	6840671	13964	-0.228	-0.0383	No
210	PPM1G	610725	14046	-0.236	-0.0414	No
211	PLAGL1	3190082 6200193	14114	-0.243	-0.0436	No
212	RCC1	2480358	14128	-0.246	-0.0429	No
213	ASNS	110368 7100687	14169	-0.253	-0.0436	No
214	TPD52L1	4590711 5570575	14225	-0.260	-0.0451	No
215	RAD54L	2970041	14358	-0.276	-0.0507	No
216	NEK11	5360369 7380521	14373	-0.278	-0.0499	No
217	CUL2	4200278	14495	-0.298	-0.0547	No
218	MAPK12	450022 1340717 7050484	14604	-0.318	-0.0588	No
219	UHMK1	3850670 6450064	14639	-0.324	-0.0588	No
220	DCTN2	540471 3780717	14688	-0.333	-0.0595	No
221	TBX3	2570672	14782	-0.348	-0.0625	No
222	PFDN1	7000095	14801	-0.350	-0.0615	No
223	CDKN2D	6040035	14900	-0.370	-0.0647	No
224	SERTAD1	2680332	15068	-0.408	-0.0714	No
225	CDC20	3440017 3440044 6220088	15103	-0.413	-0.0709	No
226	CENTD2	60408 2510156 6100494	15112	-0.415	-0.0689	No
227	APBB1	2690338	15141	-0.422	-0.0680	No
228	RACGAP1	3990162 6620736	15208	-0.437	-0.0691	No
229	TP53	6130707	15236	-0.442	-0.0680	No
230	MCM2	5050139	15297	-0.459	-0.0686	No
231	CHEK2	610139 1050022	15319	-0.465	-0.0671	No
232	CDK6	4920253	15335	-0.469	-0.0652	No
233	TOP3A	7000435	15350	-0.476	-0.0632	No
234	E2F1	5360093	15379	-0.483	-0.0619	No
235	CDK5RAP1	2570471 4010465 5960161	15406	-0.491	-0.0605	No
236	GADD45A	2900717	15472	-0.512	-0.0611	No
237	BOLL	6100743	15568	-0.545	-0.0631	No
238	NUMA1	6520576	15578	-0.548	-0.0604	No
239	HPGD	6770192	15714	-0.599	-0.0643	No
240	TGFB1	1940162	15749	-0.610	-0.0627	No
241	PA2G4	2030463	15839	-0.638	-0.0638	No
242	CDK5RAP3	3130576	15852	-0.643	-0.0608	No
243	RHOB	1500309	15922	-0.678	-0.0606	No
244	STAG3	3830112	15933	-0.682	-0.0572	No
245	CDKN2C	5050750 5130148	15989	-0.707	-0.0561	No
246	TARDBP	870390 2350093	16452	-0.917	-0.0760	No
247	DDB1	6110687	16471	-0.927	-0.0716	No
248	STK11	6550278	16569	-0.974	-0.0713	No
249	MFN2	2260195 6100164	16642	-1.000	-0.0694	No
250	POLD1	4830026	16821	-1.079	-0.0729	No
251	MAP3K11	7000039	17023	-1.210	-0.0769	No
252	CHFR	3390050 6450300 6450736	17127	-1.272	-0.0751	No
253	BCCIP	670450 2650750 5270519 6660711	17460	-1.494	-0.0846	No
254	CDC25B	6940102	17519	-1.538	-0.0789	No
255	CHMP1A	5550441	17651	-1.647	-0.0765	No
256	MSH5	1340019 4730333	17655	-1.651	-0.0671	No
257	MAD2L2	1240358	17788	-1.784	-0.0640	No
258	ZBTB17	6220082	17885	-1.873	-0.0584	No
259	ERCC2	2360750 4060390 6550138	17904	-1.897	-0.0484	No
260	BMP7	870039	18045	-2.053	-0.0442	No
261	CDK4	540075 4540600	18101	-2.120	-0.0350	No
262	SMAD3	6450671	18195	-2.238	-0.0271	No
263	DTYMK	2340377	18381	-2.603	-0.0221	No
264	BCAT1	3290128 4050408	18470	-2.890	-0.0102	No
265	CDK10	60164 1190717 3130128 3990044	18523	-3.142	0.0051	No