Details for gene set REACTOME_PROCESSING_OF_CAPPED_INTRON_CONTAINING_PRE

Table: GSEA Results Summary

Dataset	Set_03_truncNotch_versus_wtNotch.phenotype_truncNotch_versus_wtNotch.cls #wtNotch_versus_truncNotch.phenotype_truncNotch_versus_wtNotch.cls #wtNotch_versus_truncNotch_repos
Phenotype	phenotype_truncNotch_versus_wtNotch.cls#wtNotch_versus_truncNotch_repos
Upregulated in class	wtNotch
GeneSet	REACTOME_PROCESSING_OF_CAPPED_INTRON_CONTAINING_PRE_MRNA
Enrichment Score (ES)	0.5413075
Normalized Enrichment Score (NES)	1.5756662
Nominal p-value	0.0056497175
FDR q-value	0.28784725
FWER p-Value	0.979

Table: GSEA details [plain text format]
	PROBE	DESCRIPTION (from dataset)	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	SFRS1	2360440	15	3.775	0.0479	Yes
2	SFRS6	60224	18	3.719	0.0958	Yes
3	CSTF2	6040463	33	3.529	0.1405	Yes
4	CSTF3	3850156 5570458	92	2.902	0.1749	Yes
5	NUP107	6380021	196	2.542	0.2021	Yes
6	SFRS3	770315 4230593	276	2.375	0.2285	Yes
7	SF3A3	6660603	313	2.281	0.2559	Yes
8	PABPN1	460519	342	2.228	0.2832	Yes
9	NUP93	2190273	397	2.143	0.3079	Yes
10	CCAR1	3190092	477	2.021	0.3297	Yes
11	NUP155	5720576 6220114	928	1.497	0.3248	Yes
12	SF3B3	3710044	985	1.449	0.3404	Yes
13	NCBP2	5340500	990	1.442	0.3588	Yes
14	NUP160	1990551	1008	1.419	0.3762	Yes
15	DNAJC8	4050075	1095	1.336	0.3888	Yes
16	CPSF1	6290064	1124	1.314	0.4042	Yes
17	PHF5A	2690519	1145	1.284	0.4197	Yes
18	SFRS7	2760408	1222	1.224	0.4314	Yes
19	METTL3	360497	1284	1.166	0.4432	Yes
20	SF3B2	6590576	1306	1.148	0.4568	Yes
21	SMC1A	3060600 5700148 5890113 6370154	1333	1.130	0.4700	Yes
22	YBX1	1340039 4730500	1402	1.073	0.4802	Yes
23	SNRPD3	2970050	1520	1.004	0.4868	Yes
24	SF3A1	1580315	1611	0.970	0.4945	Yes
25	NUP43	3360482	1810	0.839	0.4946	Yes
26	CSTF1	4610129	1885	0.795	0.5009	Yes
27	NUPL2	6550537	1926	0.772	0.5087	Yes
28	SNRPF	3170280	2030	0.700	0.5122	Yes
29	PCBP2	5690048	2092	0.675	0.5176	Yes
30	POLR2E	2900348 3360348	2145	0.649	0.5232	Yes
31	GTF2F2	2690546	2345	0.565	0.5197	Yes
32	EFTUD2	2470707 4610148	2369	0.554	0.5256	Yes
33	NUP54	940546 2360156 4060278	2565	0.483	0.5213	Yes
34	U2AF2	450600 4670128 5420292	2584	0.476	0.5265	Yes
35	PRPF4	430301 2970364	2631	0.462	0.5300	Yes
36	MAGOH	2370373 5050068	2686	0.445	0.5328	Yes
37	RANBP2	4280338	2707	0.437	0.5374	Yes
38	FUS	4760619	2740	0.426	0.5411	Yes
39	SNRPG	2340551	2963	0.353	0.5337	Yes
40	PCF11	1240180	2964	0.353	0.5383	Yes
41	PRPF8	1230497 1570600	2991	0.345	0.5413	Yes
42	PTBP1	4070736	3078	0.319	0.5408	No
43	GTF2F1	360093	3163	0.295	0.5401	No
44	SNRPA1	1050735 6110131	3466	0.231	0.5267	No
45	RAE1	7050121	3940	0.154	0.5032	No
46	PCBP1	1050088	4086	0.137	0.4972	No
47	SFRS9	3800047	4373	0.112	0.4832	No
48	DHX9	60017 1170095 2260014	4433	0.107	0.4814	No
49	POLR2C	1690020	4438	0.106	0.4825	No
50	RBMX	7100162 2900541	5067	0.070	0.4495	No
51	SLBP	6220601	5075	0.069	0.4500	No
52	NUP153	7000452	6085	0.035	0.3960	No
53	SF4	3830341	7096	0.013	0.3417	No
54	SNRPB2	5720577	7113	0.013	0.3410	No
55	RBM5	3520402 5270121	8777	-0.014	0.2515	No
56	NUP35	5340408	8956	-0.018	0.2421	No
57	POLR2A	5220647	10192	-0.040	0.1760	No
58	TPR	1990066 6550390	10526	-0.047	0.1586	No
59	POLR2B	3780138	10672	-0.051	0.1514	No
60	SF3B1	7000632	10796	-0.054	0.1455	No
61	NUP37	2370097 6370435 6380008	11643	-0.077	0.1008	No
62	RNPS1	610736 1090021	13381	-0.170	0.0093	No
63	NFX1	450504	13564	-0.186	0.0019	No
64	NUP188	1190470	13655	-0.195	-0.0005	No
65	SFRS5	3450176 6350008	13966	-0.228	-0.0143	No
66	SNRPE	5080021	14410	-0.283	-0.0345	No
67	POLR2I	4060400	14556	-0.310	-0.0383	No
68	TXNL4A	4120286 6510242	14992	-0.391	-0.0568	No
69	POLR2J	7100372	15049	-0.403	-0.0546	No
70	EIF4E	1580403 70133 6380215	15076	-0.410	-0.0507	No
71	SF3B4	110072	15105	-0.414	-0.0469	No
72	PAPOLA	4200286 4850112	15110	-0.415	-0.0417	No
73	U2AF1	5130292	15364	-0.480	-0.0492	No
74	SNRPA	2570100 4150121 6940484	15908	-0.669	-0.0699	No
75	NUDT21	1240167	15966	-0.696	-0.0640	No
76	POLR2G	5890600	16498	-0.939	-0.0805	No
77	POLR2H	5890242	16778	-1.060	-0.0819	No
78	THOC4	3800731 6400114	16863	-1.104	-0.0722	No
79	SNRPB	1230097 2940086 3520671	16912	-1.142	-0.0600	No
80	CD2BP2	1580301	17417	-1.472	-0.0682	No
81	NUP62	1240128	17585	-1.591	-0.0567	No
82	SRRM1	6110025	17668	-1.674	-0.0396	No
83	SNRPD2	6110035	18030	-2.033	-0.0328	No
84	SF3A2	3140500	18131	-2.158	-0.0104	No
85	SFRS2	50707 380593	18457	-2.828	0.0086	No