DatasetSet_03_truncNotch_versus_wtNotch.phenotype_truncNotch_versus_wtNotch.cls
#wtNotch_versus_truncNotch.phenotype_truncNotch_versus_wtNotch.cls
#wtNotch_versus_truncNotch_repos
Phenotypephenotype_truncNotch_versus_wtNotch.cls#wtNotch_versus_truncNotch_repos
Upregulated in classwtNotch
GeneSetREACTOME_HOST_INTERACTIONS_OF_HIV_FACTORS
Enrichment Score (ES)0.55507815
Normalized Enrichment Score (NES)1.5802685
Nominal p-value0.0028169013
FDR q-value0.28752205
FWER p-Value0.974
Table: GSEA Results Summary



Fig 1: Enrichment plot: REACTOME_HOST_INTERACTIONS_OF_HIV_FACTORS   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

PROBEDESCRIPTION
(from dataset)
GENE SYMBOLGENE_TITLERANK IN GENE LISTRANK METRIC SCORERUNNING ESCORE ENRICHMENT
1KPNB116901381102.8280.0375Yes
2PSMD1456905931192.8060.0802Yes
3CD410900101472.7010.1203Yes
4TCEB111706191762.6050.1588Yes
5NUP10763800211962.5420.1969Yes
6PSMA445604271982.5390.2359Yes
7PSMD72030619 62205942932.3370.2667Yes
8KPNA152703243042.3080.3016Yes
9PSMA265100933532.2150.3331Yes
10NUP9321902733972.1430.3637Yes
11PSMD127300444882.0070.3897Yes
12AP1G123606716531.7930.4084Yes
13PAK2360438 70500686681.7830.4350Yes
14ARF138402917241.7180.4585Yes
15PSMD10520494 1170576 38300508421.6110.4769Yes
16NUP1555720576 62201149281.4970.4954Yes
17NUP160199055110081.4190.5129Yes
18PSMD443006812361.2140.5193Yes
19CD281400739 421009315780.9830.5161Yes
20NUP43336048218100.8390.5165Yes
21PSME1450193 448003518360.8230.5278Yes
22PSMD3140064718540.8110.5393Yes
23NUPL2655053719260.7720.5474Yes
24PSMC52760315 655002121430.6500.5457Yes
25PSMC6281002123560.5600.5429Yes
26PSMC4580050 158002524630.5180.5451Yes
27PSME3281053724750.5150.5524Yes
28NUP54940546 2360156 406027825650.4830.5551Yes
29RANBP2428033827070.4370.5542No
30RANBP1430215 109018029770.3490.5450No
31PSMB1294040230860.3170.5441No
32PSMB2940035 421032430970.3130.5484No
33CDK963070731800.2900.5484No
34RAE1705012139400.1540.5098No
35PSMC2704001041090.1350.5029No
36RBX12120010 234004741440.1320.5031No
37TCEB2840204 1340400 145008245000.1020.4855No
38PSMD112340538 651005350280.0720.4582No
39PSMB5629024255660.0500.4300No
40NUP153700045260850.0350.4026No
41RAN2260446 459064767890.0190.3649No
42PSMD863014276030.0050.3212No
43XPO154070777530.0020.3132No
44PSMA6506098309-0.0060.2833No
45AP2B11450184 2370148 3520139 48505938752-0.0140.2597No
46NUP3553404088956-0.0180.2490No
47PSMD53940139 45700419847-0.0330.2015No
48PSMC3248018410249-0.0410.1805No
49PSMA35900047 704016110440-0.0450.1710No
50TPR1990066 655039010526-0.0470.1671No
51B2M5080332 513005910559-0.0480.1661No
52PSMB9698047111460-0.0720.1187No
53NUP372370097 6370435 638000811643-0.0770.1101No
54HCK423059212176-0.0980.0829No
55PSMB452040212769-0.1270.0529No
56CCNT12450563 539018413093-0.1490.0378No
57NUP188119047013655-0.1950.0105No
58PPIA2900368 485016213982-0.230-0.0035No
59PSMA5539053714212-0.258-0.0119No
60FYN2100468 4760520 485068714227-0.260-0.0087No
61AP1B1429037314825-0.354-0.0354No
62PSMB3428059414852-0.359-0.0313No
63PSMB10630504 651003915732-0.604-0.0694No
64PSMB6269071115755-0.612-0.0612No
65BANF1460164 2850170 611013916267-0.831-0.0760No
66PSMA7223013116610-0.993-0.0792No
67PACS1481037216699-1.021-0.0682No
68RANGAP12320593 665060116802-1.071-0.0573No
69LCK336014216840-1.087-0.0426No
70PSMD950020 589036817209-1.336-0.0419No
71PSMC1635053817333-1.414-0.0268No
72AP2A213008217393-1.459-0.0075No
73PSMA1380059 276019517467-1.5000.0116No
74NUP62124012817585-1.5910.0297No
75PSMD24670706 505036417675-1.6790.0507No
Table: GSEA details [plain text format]



Fig 2: REACTOME_HOST_INTERACTIONS_OF_HIV_FACTORS   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet



Fig 3: REACTOME_HOST_INTERACTIONS_OF_HIV_FACTORS: Random ES distribution   
Gene set null distribution of ES for REACTOME_HOST_INTERACTIONS_OF_HIV_FACTORS