Details for gene set REACTOME_DNA

Table: GSEA Results Summary

Dataset	Set_03_truncNotch_versus_wtNotch.phenotype_truncNotch_versus_wtNotch.cls #wtNotch_versus_truncNotch.phenotype_truncNotch_versus_wtNotch.cls #wtNotch_versus_truncNotch_repos
Phenotype	phenotype_truncNotch_versus_wtNotch.cls#wtNotch_versus_truncNotch_repos
Upregulated in class	wtNotch
GeneSet	REACTOME_DNA_REPLICATION
Enrichment Score (ES)	0.60268056
Normalized Enrichment Score (NES)	1.6939838
Nominal p-value	0.0
FDR q-value	0.12864627
FWER p-Value	0.574

Table: GSEA details [plain text format]
	PROBE	DESCRIPTION (from dataset)	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	RFC4	3800082 6840142	64	3.081	0.0465	Yes
2	PSMD14	5690593	119	2.806	0.0890	Yes
3	PSMA4	4560427	198	2.539	0.1260	Yes
4	POLE	6020538	265	2.398	0.1613	Yes
5	PSMD7	2030619 6220594	293	2.337	0.1977	Yes
6	PSMA2	6510093	353	2.215	0.2304	Yes
7	RPA1	360452	385	2.159	0.2637	Yes
8	RB1	5900338	390	2.152	0.2984	Yes
9	PSMD12	730044	488	2.007	0.3257	Yes
10	PCNA	940754	526	1.941	0.3552	Yes
11	POLD3	6400278	553	1.899	0.3845	Yes
12	RFC1	1190673	630	1.828	0.4100	Yes
13	CDC7	4060546 4850041	725	1.718	0.4328	Yes
14	RPA3	5700136	821	1.631	0.4541	Yes
15	PSMD10	520494 1170576 3830050	842	1.611	0.4792	Yes
16	MCM4	2760673 5420711	904	1.538	0.5008	Yes
17	ORC5L	1940133 1940711	1013	1.414	0.5179	Yes
18	PSMD4	430068	1236	1.214	0.5256	Yes
19	PRIM1	6420746	1539	0.999	0.5255	Yes
20	GMNN	2630148	1691	0.916	0.5322	Yes
21	MCM6	60092 540181 6510110	1822	0.831	0.5387	Yes
22	PSME1	450193 4480035	1836	0.823	0.5513	Yes
23	PSMD3	1400647	1854	0.811	0.5635	Yes
24	CDC45L	70537 3130114	2050	0.690	0.5642	Yes
25	E2F2	5270609 5570377 7000465	2122	0.660	0.5711	Yes
26	PSMC5	2760315 6550021	2143	0.650	0.5805	Yes
27	MCM7	3290292 5220056	2334	0.569	0.5795	Yes
28	PSMC6	2810021	2356	0.560	0.5874	Yes
29	PSMC4	580050 1580025	2463	0.518	0.5901	Yes
30	PSME3	2810537	2475	0.515	0.5979	Yes
31	ORC4L	4230538 5550288	2535	0.494	0.6027	Yes
32	PSMB1	2940402	3086	0.317	0.5782	No
33	PSMB2	940035 4210324	3097	0.313	0.5827	No
34	FEN1	1770541	3136	0.302	0.5856	No
35	CDK2	130484 2260301 4010088 5050110	3216	0.284	0.5859	No
36	RPA2	2760301 5420195	3221	0.283	0.5903	No
37	ORC1L	2370328 6110390	3473	0.230	0.5805	No
38	ORC2L	1990470 6510019	4029	0.144	0.5529	No
39	PSMC2	7040010	4109	0.135	0.5508	No
40	PSMD11	2340538 6510053	5028	0.072	0.5025	No
41	MCM10	4920632	5254	0.062	0.4913	No
42	PSMB5	6290242	5566	0.050	0.4754	No
43	PSMD8	630142	7603	0.005	0.3657	No
44	PSMA6	50609	8309	-0.006	0.3278	No
45	POLA1	4760541	9007	-0.018	0.2905	No
46	POLE2	6110041	9182	-0.021	0.2815	No
47	PSMD5	3940139 4570041	9847	-0.033	0.2462	No
48	PSMC3	2480184	10249	-0.041	0.2253	No
49	PSMA3	5900047 7040161	10440	-0.045	0.2157	No
50	PSMB9	6980471	11460	-0.072	0.1620	No
51	RFC3	1980600	11471	-0.072	0.1626	No
52	PSMB4	520402	12769	-0.127	0.0947	No
53	MCM3	5570068	13403	-0.172	0.0634	No
54	POLA2	940519	13700	-0.200	0.0507	No
55	PSMA5	5390537	14212	-0.258	0.0273	No
56	PSMB3	4280594	14852	-0.359	-0.0013	No
57	MCM5	2680647	15085	-0.411	-0.0072	No
58	MCM2	5050139	15297	-0.459	-0.0111	No
59	POLD2	6400148	15333	-0.469	-0.0054	No
60	PSMB10	630504 6510039	15732	-0.604	-0.0171	No
61	PSMB6	2690711	15755	-0.612	-0.0083	No
62	LIG1	1980438 4540112 5570609	16090	-0.754	-0.0141	No
63	PSMA7	2230131	16610	-0.993	-0.0260	No
64	POLD1	4830026	16821	-1.079	-0.0198	No
65	RFC5	3800452 6020091	17085	-1.251	-0.0137	No
66	PSMD9	50020 5890368	17209	-1.336	0.0013	No
67	PSMC1	6350538	17333	-1.414	0.0176	No
68	PSMA1	380059 2760195	17467	-1.500	0.0347	No
69	PSMD2	4670706 5050364	17675	-1.679	0.0507	No