Details for gene set REACTOME

Table: GSEA Results Summary

Dataset	Set_03_truncNotch_versus_wtNotch.phenotype_truncNotch_versus_wtNotch.cls #wtNotch_versus_truncNotch.phenotype_truncNotch_versus_wtNotch.cls #wtNotch_versus_truncNotch_repos
Phenotype	phenotype_truncNotch_versus_wtNotch.cls#wtNotch_versus_truncNotch_repos
Upregulated in class	wtNotch
GeneSet	REACTOME_APOPTOSIS
Enrichment Score (ES)	0.57439345
Normalized Enrichment Score (NES)	1.6766545
Nominal p-value	0.0
FDR q-value	0.15359843
FWER p-Value	0.672

Table: GSEA details [plain text format]
	PROBE	DESCRIPTION (from dataset)	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	KPNB1	1690138	110	2.828	0.0305	Yes
2	PSMD14	5690593	119	2.806	0.0661	Yes
3	PSMA4	4560427	198	2.539	0.0946	Yes
4	CYCS	2030072	227	2.490	0.1251	Yes
5	NMT1	5810152	280	2.373	0.1529	Yes
6	PSMD7	2030619 6220594	293	2.337	0.1823	Yes
7	KPNA1	5270324	304	2.308	0.2115	Yes
8	RIPK1	3190025	325	2.264	0.2395	Yes
9	PSMA2	6510093	353	2.215	0.2665	Yes
10	YWHAB	1740176	404	2.133	0.2913	Yes
11	FNTA	70059	409	2.120	0.3184	Yes
12	PSMD12	730044	488	2.007	0.3400	Yes
13	ROCK1	130044	634	1.825	0.3556	Yes
14	PAK2	360438 7050068	668	1.783	0.3768	Yes
15	PSMD10	520494 1170576 3830050	842	1.611	0.3882	Yes
16	BID	4590592 6130008	869	1.579	0.4071	Yes
17	PRKCD	770592	914	1.525	0.4244	Yes
18	APAF1	580162	953	1.481	0.4414	Yes
19	PTK2	1780148	970	1.461	0.4593	Yes
20	PSMD4	430068	1236	1.214	0.4606	Yes
21	H1F0	1400408	1259	1.192	0.4748	Yes
22	CASP8	4850154	1285	1.166	0.4884	Yes
23	TFDP1	1980112	1671	0.926	0.4796	Yes
24	PPP3CC	2450139	1709	0.903	0.4892	Yes
25	FADD	2360593 4210692 6520019	1712	0.901	0.5007	Yes
26	LMNB1	5890292 6020008	1803	0.842	0.5066	Yes
27	PSME1	450193 4480035	1836	0.823	0.5155	Yes
28	PSMD3	1400647	1854	0.811	0.5250	Yes
29	BIRC2	2940435 4730020	1953	0.757	0.5295	Yes
30	MAPK8	2640195	2013	0.718	0.5355	Yes
31	TRAF2	5900148	2118	0.664	0.5385	Yes
32	TNF	6650603	2136	0.652	0.5459	Yes
33	PSMC5	2760315 6550021	2143	0.650	0.5540	Yes
34	PSMC6	2810021	2356	0.560	0.5497	Yes
35	MAPT	360706 1230706	2363	0.557	0.5566	Yes
36	PPP3R1	1190041 1570487	2386	0.549	0.5625	Yes
37	PSMC4	580050 1580025	2463	0.518	0.5650	Yes
38	PSME3	2810537	2475	0.515	0.5710	Yes
39	BCL2L1	1580452 4200152 5420484	2532	0.495	0.5744	Yes
40	PSMB1	2940402	3086	0.317	0.5486	No
41	PSMB2	940035 4210324	3097	0.313	0.5521	No
42	TNFRSF1A	1090390 6520735	3542	0.215	0.5309	No
43	DSG3	3940014	3827	0.171	0.5178	No
44	PSMC2	7040010	4109	0.135	0.5043	No
45	CASP3	6620397	4156	0.131	0.5035	No
46	GAS2	1340082	4412	0.109	0.4912	No
47	PSMD11	2340538 6510053	5028	0.072	0.4589	No
48	ADD1	1500176 3060139 3390092	5236	0.062	0.4485	No
49	PSMB5	6290242	5566	0.050	0.4314	No
50	CASP9	60577 1170368 2060576	5656	0.047	0.4272	No
51	BMX	50136 2940242 4540059	6343	0.029	0.3905	No
52	CASP6	5690239 6420551	6688	0.021	0.3722	No
53	PRKCQ	2260170 3870193	6697	0.021	0.3721	No
54	FASLG	2810044	6867	0.018	0.3632	No
55	ARHGAP10	510086 780324	7095	0.013	0.3511	No
56	AKT1	5290746	7250	0.010	0.3429	No
57	PSMD8	630142	7603	0.005	0.3240	No
58	PKP1	1500433	7697	0.003	0.3190	No
59	CFLAR	2320605 6180440	8009	-0.002	0.3022	No
60	DFFB	1770092	8236	-0.006	0.2901	No
61	PSMA6	50609	8309	-0.006	0.2863	No
62	DYNLL1	5570113	8670	-0.013	0.2670	No
63	GZMB	380066	9682	-0.030	0.2128	No
64	PSMD5	3940139 4570041	9847	-0.033	0.2044	No
65	PMAIP1	1400717 5360047 5900039	9849	-0.033	0.2048	No
66	OCLN	2570671	9935	-0.035	0.2006	No
67	GSN	3830168	9994	-0.036	0.1980	No
68	PSMC3	2480184	10249	-0.041	0.1848	No
69	PSMA3	5900047 7040161	10440	-0.045	0.1751	No
70	TNFSF10	3170300	11151	-0.062	0.1376	No
71	PSMB9	6980471	11460	-0.072	0.1219	No
72	DSG2	360528 2630603	11744	-0.081	0.1076	No
73	PSMB4	520402	12769	-0.127	0.0540	No
74	TNFRSF10B	940671 1500451 6550768 6900500	13854	-0.215	-0.0018	No
75	VIM	20431	14039	-0.235	-0.0087	No
76	FAS	4480112 6110040	14139	-0.247	-0.0108	No
77	PSMA5	5390537	14212	-0.258	-0.0114	No
78	PLEC1	6520292 50500 380075 1570088 2510692 2630497 2680017 2900746 4560497 4850376 6290398 7040471	14365	-0.276	-0.0161	No
79	PSMB3	4280594	14852	-0.359	-0.0377	No
80	E2F1	5360093	15379	-0.483	-0.0598	No
81	BCL2	730132 1570736 2470138 3800044 4810037 5690068 5860504 6650164	15654	-0.579	-0.0672	No
82	PSMB10	630504 6510039	15732	-0.604	-0.0636	No
83	PSMB6	2690711	15755	-0.612	-0.0569	No
84	CDH1	1940736	16225	-0.809	-0.0718	No
85	PSMA7	2230131	16610	-0.993	-0.0797	No
86	BAK1	6450563	16745	-1.040	-0.0736	No
87	BCAP31	1190520	17080	-1.248	-0.0756	No
88	PSMD9	50020 5890368	17209	-1.336	-0.0653	No
89	PSMC1	6350538	17333	-1.414	-0.0537	No
90	PSMA1	380059 2760195	17467	-1.500	-0.0416	No
91	DFFA	2850215	17530	-1.547	-0.0250	No
92	PSMD2	4670706 5050364	17675	-1.679	-0.0112	No
93	BAX	3830008	18200	-2.252	-0.0105	No
94	CASP7	4210156	18364	-2.559	0.0136	No