Details for gene set V$USF

Table: GSEA Results Summary

Dataset	Set_03_wtNotch_versus_normalThy.phenotype_wtNotch_versus_normalThy.cls #wtNotch_versus_normalThy.phenotype_wtNotch_versus_normalThy.cls #wtNotch_versus_normalThy_repos
Phenotype	phenotype_wtNotch_versus_normalThy.cls#wtNotch_versus_normalThy_repos
Upregulated in class	wtNotch
GeneSet	V$USF_C
Enrichment Score (ES)	0.47999826
Normalized Enrichment Score (NES)	1.3600389
Nominal p-value	0.017142856
FDR q-value	1.0
FWER p-Value	1.0

Table: GSEA details [plain text format]
	PROBE	DESCRIPTION (from dataset)	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	TIMM10	610070 1450019	3	9.579	0.0515	Yes
2	AKAP12	1450739	58	5.480	0.0781	Yes
3	FBL	5130020	61	5.340	0.1068	Yes
4	LYAR	7000402	94	4.799	0.1309	Yes
5	RPS19	5860066	163	4.257	0.1502	Yes
6	EXOSC5	3370671	167	4.220	0.1728	Yes
7	PA2G4	2030463	194	4.069	0.1933	Yes
8	G6PC3	1580487 5390253	220	3.945	0.2132	Yes
9	ABCB6	6350138	302	3.607	0.2283	Yes
10	EXOSC2	6900471	333	3.477	0.2454	Yes
11	PFDN2	4230156	348	3.411	0.2630	Yes
12	PPAT	1980019	351	3.407	0.2813	Yes
13	NUDC	4780025	395	3.235	0.2964	Yes
14	HMOX1	1740687	407	3.190	0.3130	Yes
15	IPO4	5050619	442	3.084	0.3278	Yes
16	OPRS1	6130128 6290717	496	2.961	0.3409	Yes
17	SDC1	3440471 6350408	522	2.876	0.3550	Yes
18	EIF4B	5390563 5270577	653	2.610	0.3621	Yes
19	HYAL2	1500152	697	2.535	0.3734	Yes
20	EIF2C2	770451	739	2.467	0.3845	Yes
21	HMGN2	3140091	779	2.385	0.3952	Yes
22	FKBP11	3170575	979	2.067	0.3956	Yes
23	GPD1	2480095	1032	1.991	0.4035	Yes
24	HSPE1	3170438	1121	1.886	0.4089	Yes
25	PAICS	610142	1131	1.879	0.4185	Yes
26	ENO3	5270136	1206	1.805	0.4242	Yes
27	PSMB3	4280594	1211	1.799	0.4337	Yes
28	SRP72	3990427	1241	1.774	0.4417	Yes
29	POLR3E	380152	1338	1.679	0.4456	Yes
30	RPL22	4070070	1401	1.628	0.4510	Yes
31	HERPUD1	7100440	1584	1.449	0.4489	Yes
32	EIF4G1	4070446	1619	1.417	0.4547	Yes
33	MYOHD1	1410520	1832	1.246	0.4499	Yes
34	BCL9L	6940053	1877	1.210	0.4541	Yes
35	FHOD1	2680279	1942	1.155	0.4568	Yes
36	SH3KBP1	670102 2850458 7000309	1990	1.112	0.4603	Yes
37	PABPC4	1990170 6760270 5390138	2166	1.001	0.4562	Yes
38	PABPC1	2650180 2690253 6020632 1990270	2171	1.000	0.4613	Yes
39	IVNS1ABP	4760601 6520113	2343	0.915	0.4570	Yes
40	ANXA6	2190014	2422	0.865	0.4574	Yes
41	MORF4L2	6450133	2431	0.863	0.4616	Yes
42	POLR2H	5890242	2498	0.821	0.4625	Yes
43	MPP3	1400056 4480411 6770168	2567	0.777	0.4630	Yes
44	MYST3	5270500	2576	0.772	0.4667	Yes
45	SLC39A7	5570131	2604	0.758	0.4693	Yes
46	STMN1	1990717	2698	0.711	0.4681	Yes
47	CACNA1D	1740315 4730731	2744	0.682	0.4694	Yes
48	PSEN2	130382	2754	0.678	0.4725	Yes
49	GTF2H1	2570746 2650148	2773	0.670	0.4752	Yes
50	PPARGC1B	3290114	2786	0.666	0.4781	Yes
51	CDC14A	4050132	2817	0.652	0.4800	Yes
52	B4GALT2	780037	3016	0.565	0.4723	No
53	UBE1	4150139 7050463	3061	0.550	0.4729	No
54	TIMM9	2450484	3293	0.460	0.4628	No
55	CNNM1	2190433	3583	0.365	0.4491	No
56	RUNX2	1400193 4230215	3628	0.345	0.4486	No
57	FARP1	5290102 7100341	3678	0.330	0.4477	No
58	AMPD2	630093 1170070	3701	0.323	0.4483	No
59	SLC26A2	2360278	3949	0.265	0.4363	No
60	SYT3	6380017	3959	0.262	0.4372	No
61	TNFRSF21	6380100	3992	0.253	0.4368	No
62	ARRDC3	4610390	4025	0.249	0.4364	No
63	BHLHB2	7040603	4140	0.228	0.4315	No
64	TIAL1	4150048 6510605	4148	0.228	0.4323	No
65	NLN	1450576 5870575	4229	0.214	0.4291	No
66	UBXD3	5050193	4242	0.212	0.4296	No
67	SUCLG2	5340397 5700270	4269	0.208	0.4294	No
68	CAMK4	1690091	4340	0.200	0.4266	No
69	SOCS5	3830398 7100093	4608	0.167	0.4130	No
70	ALDH3B1	4210010 6940403	4722	0.156	0.4078	No
71	AVP	2100113	4724	0.156	0.4085	No
72	EFNB1	2970433	4725	0.156	0.4094	No
73	DAZAP1	5890563	4777	0.151	0.4074	No
74	NR1D1	2360471 770746 6590204	5147	0.122	0.3881	No
75	GTF2A1	4120138 4920524 5390110 1230397	5255	0.115	0.3829	No
76	HOXA3	3610632 6020358	5397	0.107	0.3758	No
77	HSPH1	1690017	5486	0.102	0.3716	No
78	GPRC5C	1580372	5528	0.100	0.3699	No
79	SYT6	2510280 3850128 4540064	5583	0.098	0.3675	No
80	SEMA7A	2630239 5050593	5594	0.097	0.3675	No
81	HS3ST3A1	2230497	5988	0.079	0.3466	No
82	XRN2	130603 1230113 4230309	5998	0.079	0.3465	No
83	RUSC1	6450093 6980575	6058	0.076	0.3437	No
84	COL2A1	460446 3940500	6227	0.070	0.3350	No
85	PIGW	4810072	6375	0.065	0.3274	No
86	SC5DL	6650390	6447	0.062	0.3238	No
87	TBX4	3060008	6450	0.062	0.3241	No
88	LTBR	2450341	6473	0.061	0.3232	No
89	NXPH1	3870546	6731	0.054	0.3096	No
90	SGTB	460170	6886	0.050	0.3015	No
91	FGF14	2630390 3520075 6770048	7005	0.048	0.2953	No
92	ELOVL4	5220333	7010	0.047	0.2954	No
93	KIAA0427	1690435	7062	0.046	0.2928	No
94	DNAJB9	460114	7132	0.044	0.2893	No
95	BMP4	380113	7134	0.044	0.2895	No
96	ETV1	70735 2940603 5080463	7339	0.040	0.2787	No
97	PLA2G4A	6380364	7405	0.039	0.2754	No
98	DRD1	430025	7409	0.039	0.2754	No
99	LIN28	6590672	7537	0.036	0.2687	No
100	SLC12A5	1980692	7692	0.033	0.2605	No
101	RHEBL1	2810576	7702	0.033	0.2602	No
102	DNMT3A	4050068 4810717	7769	0.032	0.2568	No
103	POGK	5290315	7921	0.029	0.2488	No
104	SATB2	2470181	7951	0.028	0.2473	No
105	HOXC12	5270411	8100	0.026	0.2395	No
106	HOXC13	4070722	8173	0.024	0.2357	No
107	BMP2K	60541 5570504	8196	0.024	0.2346	No
108	GRIN2A	6550538	8547	0.018	0.2157	No
109	CGN	5890139 6370167 6400537	8549	0.018	0.2158	No
110	FGF11	840292	8837	0.013	0.2003	No
111	CHRM1	4280619	9255	0.007	0.1777	No
112	TLL1	2680315	9308	0.006	0.1749	No
113	SNX5	1570021 6860609	9426	0.004	0.1686	No
114	LAP3	2570064	9787	-0.001	0.1490	No
115	CTSF	6100021	9893	-0.003	0.1433	No
116	LRP8	3610746 5360035	9894	-0.003	0.1434	No
117	SIRT1	1190731	10156	-0.007	0.1292	No
118	ARX	6900504	10560	-0.013	0.1074	No
119	MTHFD1	5900398 6520427	10575	-0.013	0.1067	No
120	NKX2-3	1990736 6940088	10781	-0.016	0.0957	No
121	LHX9	2350112	10874	-0.018	0.0908	No
122	ABCA1	6290156	10877	-0.018	0.0908	No
123	FADS3	3120079	10921	-0.018	0.0886	No
124	ENPP6	110524 580563	10945	-0.019	0.0874	No
125	MAX	5220021	11147	-0.022	0.0766	No
126	PRKCE	5700053	11229	-0.024	0.0724	No
127	PAX6	1190025	11552	-0.029	0.0551	No
128	SLC6A15	5290176 6040017	11562	-0.029	0.0547	No
129	EIF3S1	6130368 6770044	11684	-0.032	0.0483	No
130	HPCA	6860010	11860	-0.036	0.0390	No
131	NPM1	4730427	11866	-0.036	0.0389	No
132	FLT3	2640487	12169	-0.042	0.0228	No
133	SET	6650286	12430	-0.048	0.0089	No
134	TDRD1	4230301 6110750	12545	-0.052	0.0030	No
135	SCFD2	2480504	12606	-0.053	0.0001	No
136	EEF1E1	4540711	12817	-0.060	-0.0110	No
137	IPO13	3870088	12934	-0.064	-0.0169	No
138	WEE1	3390070	13037	-0.067	-0.0221	No
139	HPCAL4	2600484	13162	-0.072	-0.0285	No
140	DAZL	4050082	13213	-0.074	-0.0308	No
141	NPTX1	3710736	13357	-0.081	-0.0381	No
142	HHIP	6940438	13401	-0.083	-0.0400	No
143	ADAMTS17	6510739	13481	-0.087	-0.0438	No
144	SNCAIP	4010551	13535	-0.089	-0.0462	No
145	CHST11	6760546	13550	-0.090	-0.0465	No
146	ETV4	2450605	14012	-0.121	-0.0708	No
147	CNOT4	2320242 6760706	14209	-0.140	-0.0807	No
148	MCM8	6130743	14383	-0.157	-0.0892	No
149	CLCN2	1940021	14501	-0.169	-0.0947	No
150	ADCY3	2350347 3440242	14667	-0.190	-0.1026	No
151	RPL13A	2680519 5700142	14763	-0.207	-0.1067	No
152	PER1	3290315	14765	-0.207	-0.1056	No
153	PTMA	5570148	15281	-0.334	-0.1317	No
154	HOXA4	940152	15401	-0.369	-0.1362	No
155	RXRB	1780040 5340438	15496	-0.407	-0.1391	No
156	SLC31A2	1450577	15516	-0.417	-0.1379	No
157	BCKDHA	50189	15764	-0.528	-0.1484	No
158	TEF	1050050 3120397 4060487	15768	-0.529	-0.1458	No
159	CRMP1	4810014	15989	-0.646	-0.1542	No
160	GRK6	1500053	16014	-0.659	-0.1520	No
161	MNT	4920575	16146	-0.736	-0.1551	No
162	MAT2A	4070026 4730079 6020280	16267	-0.813	-0.1572	No
163	MXD4	4810113	16347	-0.865	-0.1568	No
164	EIF4E	1580403 70133 6380215	16348	-0.866	-0.1522	No
165	HSPA4	1050170 3450309	16403	-0.901	-0.1502	No
166	RPL19	5550592	16436	-0.918	-0.1470	No
167	CENTB5	5690128	16710	-1.093	-0.1560	No
168	GNA13	4590102	16772	-1.147	-0.1531	No
169	GPX1	4150093	16775	-1.150	-0.1470	No
170	USP2	1190292 1240253 4850035	16789	-1.162	-0.1414	No
171	PDK2	2690017	16814	-1.184	-0.1363	No
172	H3F3A	2900086	16833	-1.191	-0.1309	No
173	ARF6	3520026	16977	-1.316	-0.1316	No
174	HSPBAP1	4060022	17181	-1.572	-0.1341	No
175	FCHSD2	5720092	17198	-1.593	-0.1264	No
176	PFN1	6130132	17292	-1.714	-0.1222	No
177	SLC20A1	6420014	17320	-1.735	-0.1143	No
178	EIF5A	1500059 5290022 6370026	17435	-1.918	-0.1101	No
179	BCAS3	4050647	17532	-2.092	-0.1041	No
180	ACVR2B	1660546	17634	-2.309	-0.0971	No
181	GABARAP	1450286	18075	-3.356	-0.1029	No
182	DIABLO	2360170	18180	-3.751	-0.0883	No
183	PPP1R9B	3130619	18306	-4.410	-0.0713	No
184	BCL6	940100	18397	-5.006	-0.0492	No
185	WBP2	3170128	18414	-5.182	-0.0221	No
186	RORC	1740121	18500	-6.120	0.0063	No