Details for gene set V$ER_Q6

Table: GSEA Results Summary

Dataset	Set_03_wtNotch_versus_normalThy.phenotype_wtNotch_versus_normalThy.cls #wtNotch_versus_normalThy.phenotype_wtNotch_versus_normalThy.cls #wtNotch_versus_normalThy_repos
Phenotype	phenotype_wtNotch_versus_normalThy.cls#wtNotch_versus_normalThy_repos
Upregulated in class	wtNotch
GeneSet	V$ER_Q6_01
Enrichment Score (ES)	0.40756074
Normalized Enrichment Score (NES)	1.1525569
Nominal p-value	0.09703504
FDR q-value	1.0
FWER p-Value	1.0

Table: GSEA details [plain text format]
	PROBE	DESCRIPTION (from dataset)	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	ALDOA	6290672	47	5.798	0.0346	Yes
2	EIF2B3	3290463	53	5.612	0.0703	Yes
3	PCBP4	6350722	140	4.445	0.0942	Yes
4	ATP5G1	5290019	245	3.817	0.1130	Yes
5	ZFPM1	6760093	252	3.798	0.1371	Yes
6	GNB1L	3840368 5270215	382	3.302	0.1512	Yes
7	SLC6A9	2470520	426	3.130	0.1690	Yes
8	PHF5A	2690519	451	3.056	0.1873	Yes
9	SDC1	3440471 6350408	522	2.876	0.2019	Yes
10	NFIL3	4070377	569	2.751	0.2171	Yes
11	SLC25A1	4050402	574	2.736	0.2344	Yes
12	B3GNT6	1340736	595	2.701	0.2506	Yes
13	PPP1R16A	5080239	680	2.567	0.2625	Yes
14	PSMF1	5340056	830	2.303	0.2692	Yes
15	TOMM40	6110017	939	2.111	0.2769	Yes
16	AAMP	2640059	964	2.081	0.2889	Yes
17	POLE3	5270019	965	2.081	0.3023	Yes
18	RTN4	50725 630647 870097 870184	1318	1.704	0.2941	Yes
19	RHOB	1500309	1412	1.615	0.2994	Yes
20	LCP1	4280397	1419	1.608	0.3094	Yes
21	RNMT	1770500	1474	1.557	0.3165	Yes
22	PDE6D	3130537 3390014	1499	1.532	0.3250	Yes
23	ACO2	4230600	1526	1.509	0.3333	Yes
24	MT2A	6860286	1566	1.469	0.3406	Yes
25	NDRG2	450403	1637	1.406	0.3458	Yes
26	GTPBP1	2230541 4560528	1661	1.384	0.3534	Yes
27	PDZK1	2320128	1748	1.306	0.3571	Yes
28	ATP5A1	1990722	1796	1.273	0.3627	Yes
29	HSPG2	2510687 6220750	1893	1.192	0.3652	Yes
30	FKBP4	870035	1910	1.178	0.3719	Yes
31	TBX6	4730139 6840647	1939	1.156	0.3778	Yes
32	CDKN2C	5050750 5130148	2033	1.076	0.3796	Yes
33	GREB1	1230707 4560056	2135	1.015	0.3806	Yes
34	TPM3	670600 3170296 5670167 6650471	2176	1.000	0.3849	Yes
35	PDHA1	5550397	2210	0.991	0.3894	Yes
36	OTX2	1190471	2239	0.983	0.3942	Yes
37	PKP4	3710400 5890097	2240	0.982	0.4005	Yes
38	HIP2	2810095 3990369 4120301	2260	0.974	0.4057	Yes
39	BRMS1	6860280	2378	0.896	0.4051	Yes
40	DGCR8	3450632	2436	0.859	0.4076	Yes
41	STMN1	1990717	2698	0.711	0.3980	No
42	CDC14A	4050132	2817	0.652	0.3957	No
43	TRPS1	870100	2983	0.579	0.3905	No
44	TSGA14	6660465	3037	0.559	0.3912	No
45	SLC16A6	1690156	3045	0.555	0.3944	No
46	PXN	3290048 6400132	3080	0.546	0.3961	No
47	BNIP3L	1940347	3141	0.521	0.3961	No
48	GAS7	2120358 6450494	3203	0.498	0.3960	No
49	SLC25A5	1980672	3209	0.496	0.3989	No
50	SRP68	4480731	3222	0.492	0.4014	No
51	LRFN4	5670368	3505	0.392	0.3887	No
52	RRBP1	2260477 5050440	3676	0.330	0.3815	No
53	ERG	50154 1770739	3890	0.277	0.3718	No
54	APBA2BP	5700341	3990	0.254	0.3680	No
55	ZFP36L2	510180	3995	0.253	0.3694	No
56	TINAG	1570609 6510215	4031	0.247	0.3691	No
57	AOC2	520348 3120008	4183	0.221	0.3624	No
58	TLX2	1090128 2900451	4317	0.202	0.3564	No
59	MID1	4070114 4760458	4475	0.182	0.3491	No
60	ERN1	2360403	4649	0.163	0.3407	No
61	RBBP9	2480139	4889	0.141	0.3287	No
62	OTP	2630070	5120	0.124	0.3170	No
63	NR1D1	2360471 770746 6590204	5147	0.122	0.3164	No
64	UBE2R2	1230504	5187	0.119	0.3150	No
65	KIRREL3	2630195	5298	0.113	0.3098	No
66	RAP2C	1690132	5324	0.111	0.3091	No
67	GLRA2	7000019	5345	0.111	0.3088	No
68	CNTN4	1780300 5570577 6370019	5359	0.110	0.3088	No
69	HOXA3	3610632 6020358	5397	0.107	0.3074	No
70	HOXB3	520292	5445	0.105	0.3056	No
71	COVA1	5340504 5360594	5507	0.101	0.3029	No
72	ZIC1	670113	5512	0.101	0.3033	No
73	STARD6	6940541	5552	0.099	0.3019	No
74	WNT11	1230278	5632	0.095	0.2982	No
75	GCM1	6510687	5682	0.093	0.2961	No
76	GFAP	2060092	5696	0.092	0.2960	No
77	MAP2K7	2260086	5781	0.087	0.2920	No
78	FBXL14	4670315	6099	0.075	0.2753	No
79	MCC	620750	6173	0.072	0.2718	No
80	FGF9	1050195	6299	0.068	0.2655	No
81	MRVI1	4810338 4850601 5900441	6342	0.066	0.2636	No
82	LIFR	3360068 3830102	6389	0.064	0.2615	No
83	JARID2	6290538	6407	0.064	0.2610	No
84	HOXA10	6110397 7100458	6421	0.063	0.2607	No
85	MAGED1	6650332	6591	0.058	0.2519	No
86	NOG	2320609	6622	0.057	0.2507	No
87	PTHR1	2640711 3360647	6774	0.053	0.2428	No
88	GRID2	2680242	6824	0.051	0.2405	No
89	CHRDL1	1580037 6380204	6954	0.049	0.2338	No
90	PURA	3870156	7018	0.047	0.2307	No
91	SLC10A2	110537	7158	0.044	0.2234	No
92	SYNJ2BP	4150672 6770706	7207	0.043	0.2211	No
93	FBXW7	4210338 7050280	7438	0.038	0.2089	No
94	ESRRB	3870082	7466	0.037	0.2076	No
95	DNMT3A	4050068 4810717	7769	0.032	0.1915	No
96	RIMS4	6110500	7771	0.032	0.1916	No
97	WNT3	2360685	7832	0.031	0.1885	No
98	BHLHB5	6510520	7933	0.029	0.1833	No
99	PFTK1	1780181	8011	0.027	0.1793	No
100	PCDH8	2360047 4200452	8530	0.018	0.1513	No
101	CALD1	1770129 1940397	8546	0.018	0.1506	No
102	CLDN12	6350341	8694	0.015	0.1427	No
103	NKX2-2	4150731	8814	0.013	0.1364	No
104	GPR3	2970452	8962	0.011	0.1285	No
105	B3GALT2	430136	9017	0.010	0.1256	No
106	LRRN1	3290154	9225	0.007	0.1144	No
107	GNAI1	4560390	9271	0.006	0.1120	No
108	DCX	130075 5360025 7050673	9304	0.006	0.1103	No
109	TREX2	4920707	9473	0.003	0.1012	No
110	SPOCK2	6650369	9521	0.003	0.0987	No
111	BTBD3	1980041 2510577 3190053 4200746	9535	0.002	0.0980	No
112	S100A5	4120592	9916	-0.003	0.0774	No
113	CDKL5	2450070	10141	-0.006	0.0653	No
114	PDE1A	1050458 2570563	10405	-0.010	0.0511	No
115	TBC1D15	870673	10596	-0.013	0.0409	No
116	PAK1IP1	2230438	10706	-0.015	0.0351	No
117	PGF	4810593	10789	-0.016	0.0307	No
118	GRM8	4780082	10889	-0.018	0.0255	No
119	FIGN	7000601	11187	-0.023	0.0095	No
120	MITF	380056	11505	-0.028	-0.0075	No
121	POU3F3	6400047	11514	-0.029	-0.0077	No
122	PAM	5290528	11515	-0.029	-0.0076	No
123	PPARA	2060026	11623	-0.031	-0.0132	No
124	TLX3	510619	11630	-0.031	-0.0133	No
125	EGFL9	1410091	11663	-0.031	-0.0148	No
126	CREB5	2320368	11678	-0.032	-0.0154	No
127	APEX2	3780044	12106	-0.041	-0.0383	No
128	GNRHR	130438	12150	-0.042	-0.0404	No
129	PRDM1	3170347 3520301	12786	-0.059	-0.0744	No
130	SRPK2	6380341	12963	-0.065	-0.0835	No
131	HIPK2	6350647	12971	-0.065	-0.0835	No
132	ONECUT2	1340008	12979	-0.065	-0.0835	No
133	ATP6V0A4	360100	13193	-0.074	-0.0945	No
134	FSHB	7100592	13233	-0.075	-0.0962	No
135	IL23R	3990014	13235	-0.075	-0.0957	No
136	DDR1	2060044 5220180	13248	-0.076	-0.0959	No
137	ISL1	4810239	13435	-0.085	-0.1055	No
138	ERBB4	4610400 4810017	13448	-0.085	-0.1056	No
139	SHH	5570400	13460	-0.086	-0.1056	No
140	HOXB9	2640687	13581	-0.091	-0.1115	No
141	LRRN3	1450133	13707	-0.100	-0.1177	No
142	LRP5	2100397 3170484	13728	-0.101	-0.1181	No
143	RAB11FIP1	2470333	13876	-0.112	-0.1254	No
144	GABARAPL2	610204 3360047	14008	-0.121	-0.1317	No
145	SCNN1A	4730019	14100	-0.128	-0.1358	No
146	TBR1	5130053	14237	-0.142	-0.1423	No
147	HOXB7	4540706 4610358	14615	-0.184	-0.1615	No
148	SPRED1	6940706	14911	-0.237	-0.1760	No
149	NR4A2	60273	14939	-0.245	-0.1759	No
150	NNT	540253 1170471 5550092 6760397	15402	-0.369	-0.1986	No
151	TCF7	3800736 5390181	15547	-0.431	-0.2037	No
152	SP6	60484 510452 2690333	15576	-0.441	-0.2023	No
153	COPZ2	1780010 2360020 4070373	15688	-0.492	-0.2052	No
154	ZIC4	1500082	15724	-0.510	-0.2038	No
155	CKB	4560632	15756	-0.524	-0.2022	No
156	RBMS1	6400014	15793	-0.538	-0.2007	No
157	SLC4A7	2370056	15867	-0.579	-0.2009	No
158	MNT	4920575	16146	-0.736	-0.2113	No
159	DNAJA2	2630253 6860358	16235	-0.794	-0.2110	No
160	EIF4E	1580403 70133 6380215	16348	-0.866	-0.2115	No
161	NDUFB3	4610687	16540	-0.993	-0.2155	No
162	GNA13	4590102	16772	-1.147	-0.2206	No
163	CAMKK2	5270047	16998	-1.342	-0.2242	No
164	KCNN3	6520600 6420138	17130	-1.518	-0.2216	No
165	FCHSD2	5720092	17198	-1.593	-0.2150	No
166	CHD2	4070039	17205	-1.609	-0.2050	No
167	SLC9A1	2650093	17245	-1.656	-0.1965	No
168	FGF13	630575 1570440 5360121	17286	-1.707	-0.1877	No
169	IMMT	870450 4280438	17315	-1.731	-0.1782	No
170	EIF2AK3	4280161	17796	-2.616	-0.1874	No
171	UHRF2	60050 840280 1340746 5080091	17842	-2.723	-0.1724	No
172	MAP2K6	1230056 2940204	17854	-2.745	-0.1554	No
173	DTNB	2850100	17862	-2.756	-0.1381	No
174	COX7A2L	1500142	18019	-3.119	-0.1266	No
175	PHF12	870400 3130687	18023	-3.139	-0.1066	No
176	CD37	770273	18140	-3.607	-0.0897	No
177	MAP1LC3A	840519 5570605	18161	-3.680	-0.0672	No
178	CIC	6370161	18256	-4.145	-0.0458	No
179	BCL6	940100	18397	-5.006	-0.0212	No
180	SATB1	5670154	18410	-5.157	0.0112	No