Details for gene set V$E2F

Table: GSEA Results Summary

Dataset	Set_03_wtNotch_versus_normalThy.phenotype_wtNotch_versus_normalThy.cls #wtNotch_versus_normalThy.phenotype_wtNotch_versus_normalThy.cls #wtNotch_versus_normalThy_repos
Phenotype	phenotype_wtNotch_versus_normalThy.cls#wtNotch_versus_normalThy_repos
Upregulated in class	wtNotch
GeneSet	V$E2F_Q3
Enrichment Score (ES)	0.44010663
Normalized Enrichment Score (NES)	1.2317401
Nominal p-value	0.061068702
FDR q-value	1.0
FWER p-Value	1.0

Table: GSEA details [plain text format]
	PROBE	DESCRIPTION (from dataset)	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	TCP1	2450100 5130524	76	5.073	0.0356	Yes
2	RBBP7	430113 450450 2370309	218	3.950	0.0589	Yes
3	SLC25A3	670112	262	3.748	0.0859	Yes
4	IMPDH2	5220138	284	3.680	0.1136	Yes
5	UNG	3130110 6100364	463	3.028	0.1277	Yes
6	HNRPA1	4670398 5050687	481	2.980	0.1501	Yes
7	NCL	2360463 4540279	534	2.844	0.1695	Yes
8	GCH1	670364 6550358	591	2.707	0.1877	Yes
9	SHMT1	5900132	692	2.540	0.2022	Yes
10	APRIN	2810050	717	2.508	0.2205	Yes
11	HMGN2	3140091	779	2.385	0.2359	Yes
12	RFC1	1190673	840	2.283	0.2505	Yes
13	OLFML3	7100463	1086	1.930	0.2524	Yes
14	LIG1	1980438 4540112 5570609	1120	1.886	0.2654	Yes
15	ABCF2	630040 3140035 6450601	1207	1.804	0.2748	Yes
16	DNAJC11	360465 3390215	1356	1.667	0.2799	Yes
17	BAT3	1990594	1418	1.608	0.2892	Yes
18	HIST1H2BK	6130433	1481	1.551	0.2980	Yes
19	PPP1R8	6290292	1489	1.542	0.3097	Yes
20	TFRC	4050551	1557	1.475	0.3176	Yes
21	E2F1	5360093	1632	1.410	0.3246	Yes
22	MCM6	60092 540181 6510110	1636	1.407	0.3355	Yes
23	SLC38A1	520465	1683	1.365	0.3437	Yes
24	SFRS2	50707 380593	1695	1.356	0.3537	Yes
25	PRPS1	6350129	1706	1.347	0.3637	Yes
26	MCM3	5570068	1745	1.310	0.3719	Yes
27	NASP	2260139 2940369 5130707	1798	1.270	0.3790	Yes
28	MCM4	2760673 5420711	1842	1.237	0.3864	Yes
29	TBX6	4730139 6840647	1939	1.156	0.3902	Yes
30	POLA2	940519	2009	1.100	0.3951	Yes
31	PIAS1	5340301	2027	1.084	0.4027	Yes
32	CDC6	4570296 5360600	2164	1.001	0.4032	Yes
33	DPYSL2	2100427 3130112 5700324	2183	0.999	0.4100	Yes
34	DLST	2320722	2365	0.903	0.4073	Yes
35	RBBP4	6650528	2385	0.891	0.4132	Yes
36	MCM7	3290292 5220056	2495	0.823	0.4138	Yes
37	GMNN	2630148	2566	0.779	0.4161	Yes
38	EPHB2	1090288 1410377 2100541	2583	0.768	0.4212	Yes
39	ZCCHC8	2260332 2350487	2697	0.712	0.4207	Yes
40	STMN1	1990717	2698	0.711	0.4263	Yes
41	CLTA	450010	2763	0.673	0.4281	Yes
42	KCNA1	2030594	2804	0.658	0.4311	Yes
43	PHF15	6550066 6860673	2816	0.652	0.4356	Yes
44	CPNE5	6380673	2827	0.648	0.4401	Yes
45	MCM2	5050139	3072	0.548	0.4312	No
46	KPNB1	1690138	3306	0.455	0.4221	No
47	DNMT1	2260097	3343	0.447	0.4237	No
48	SNPH	2680484	3408	0.426	0.4236	No
49	ERBB2IP	580253 1090672	3449	0.410	0.4246	No
50	PAPOLG	2470400	3474	0.402	0.4265	No
51	STAG2	4540132	3490	0.397	0.4288	No
52	CDC25A	3800184	3565	0.371	0.4277	No
53	ADAMTS2	2650025 6370133 6840670	3686	0.328	0.4237	No
54	SSBP3	870717 1050377 7040551	3805	0.298	0.4197	No
55	NDUFA11	3780333	3821	0.293	0.4212	No
56	CNOT3	130519 4480292 1990609	3924	0.271	0.4178	No
57	CDCA7	3060097	4118	0.232	0.4091	No
58	RAD51	6110450 6980280	4124	0.231	0.4107	No
59	KCND2	1170128 2100112	4236	0.212	0.4063	No
60	KLF4	1850022 3830239 5570750	4329	0.202	0.4029	No
61	LASP1	1690528 2190341 6420341	4333	0.201	0.4043	No
62	AP4M1	70609 3440128	4448	0.185	0.3996	No
63	RHD	4050168	4603	0.168	0.3926	No
64	PRKDC	1400072 4230541	4798	0.149	0.3832	No
65	HS6ST3	5910138	4815	0.148	0.3835	No
66	ATRX	2340039 3610132 4210373	4830	0.146	0.3839	No
67	PAQR4	730736	4879	0.142	0.3824	No
68	SEMA5A	6200110 6520435	4931	0.138	0.3807	No
69	E2F3	50162 460180	5063	0.127	0.3746	No
70	ARID4A	520156 1050707	5087	0.126	0.3744	No
71	RANBP1	430215 1090180	5116	0.124	0.3738	No
72	GRIK2	4610164	5316	0.112	0.3639	No
73	SALL1	5420020 7050195	5616	0.096	0.3485	No
74	NRP2	4070400 5860041 6650446	5980	0.079	0.3295	No
75	FBXO5	2630551	6573	0.059	0.2979	No
76	STK35	2360121	6675	0.056	0.2929	No
77	MRPL18	6560341	6894	0.050	0.2814	No
78	CTDSP1	6650215 6940731	6971	0.048	0.2777	No
79	HNRPD	4120021	7148	0.044	0.2685	No
80	ARHGAP6	2060121	7444	0.038	0.2528	No
81	TOPBP1	6020333	7505	0.037	0.2499	No
82	UFD1L	870020	7530	0.036	0.2489	No
83	CDC45L	70537 3130114	7624	0.034	0.2441	No
84	HIST1H1D	3440446	7964	0.028	0.2260	No
85	POLE2	6110041	8208	0.023	0.2130	No
86	NPR3	1580239	8413	0.020	0.2021	No
87	PODN	3710068	8504	0.018	0.1974	No
88	NUP153	7000452	9033	0.010	0.1689	No
89	ONECUT1	6450136	9339	0.005	0.1524	No
90	AP1S2	780279 4280707	9353	0.005	0.1517	No
91	TREX2	4920707	9473	0.003	0.1453	No
92	TBX3	2570672	10330	-0.009	0.0990	No
93	SEZ6	3450722	10347	-0.009	0.0983	No
94	PCSK1	2350148	10605	-0.013	0.0844	No
95	IPO7	2190746	10682	-0.015	0.0804	No
96	CACNA1G	3060161 4810706 5550722	10723	-0.015	0.0784	No
97	EPHB1	4610056	10903	-0.018	0.0688	No
98	BARHL1	4210113	11111	-0.022	0.0578	No
99	ORC1L	2370328 6110390	11192	-0.023	0.0537	No
100	FMO4	360735	11253	-0.024	0.0506	No
101	ASCL1	6650100	11383	-0.026	0.0438	No
102	PEG3	3710020	11492	-0.028	0.0382	No
103	SMAD6	870504	12022	-0.039	0.0099	No
104	CASP8AP2	5910593	12236	-0.044	-0.0013	No
105	WEE1	3390070	13037	-0.067	-0.0441	No
106	LHX5	2350097	13205	-0.074	-0.0526	No
107	ADCY8	6760519	13229	-0.075	-0.0532	No
108	DMD	1740041 3990332	13292	-0.078	-0.0560	No
109	CBX5	3830072 6290167	13506	-0.088	-0.0668	No
110	MEIS1	1400575	13618	-0.094	-0.0721	No
111	SLC6A4	2230372	13678	-0.098	-0.0745	No
112	DDB2	3520341 4610168 4850184 4920717	13864	-0.111	-0.0837	No
113	NOL4	5050446 5360519	13870	-0.111	-0.0831	No
114	EZH2	6130605 6380524	14010	-0.121	-0.0897	No
115	TRIM47	5080717	14142	-0.133	-0.0957	No
116	UXT	110019 5080066	14307	-0.149	-0.1034	No
117	JPH1	610739	14363	-0.155	-0.1052	No
118	MCM8	6130743	14383	-0.157	-0.1050	No
119	INSM1	3450671	14998	-0.258	-0.1362	No
120	MDGA1	1170139	15106	-0.280	-0.1398	No
121	ATAD2	870242 2260687	15260	-0.328	-0.1455	No
122	PVRL1	2570167 5220519 5890500 3190309	15385	-0.364	-0.1494	No
123	H2AFZ	1470168	15403	-0.369	-0.1474	No
124	HIST1H2AH	3710333	15806	-0.544	-0.1649	No
125	E2F7	4200056	15843	-0.563	-0.1625	No
126	SFRS1	2360440	15931	-0.616	-0.1623	No
127	ATE1	290491 6940722	15949	-0.628	-0.1584	No
128	CTCF	5340017	15969	-0.635	-0.1544	No
129	ING3	110438 2060390	16095	-0.708	-0.1556	No
130	KLF5	3840348	16139	-0.734	-0.1522	No
131	PLK4	430162 5720110	16214	-0.777	-0.1501	No
132	MAT2A	4070026 4730079 6020280	16267	-0.813	-0.1466	No
133	PCSK4	130687 670711 3170075 6400411	16535	-0.989	-0.1533	No
134	FLI1	3990142	16561	-0.999	-0.1468	No
135	USP1	2760541 5690438 6220673	16595	-1.011	-0.1407	No
136	MAZ	3360121 6940750	16660	-1.052	-0.1359	No
137	HTF9C	3190048 4120132	16779	-1.153	-0.1333	No
138	PCNA	940754	17042	-1.404	-0.1365	No
139	PPP1CC	6380300 2510647	17432	-1.914	-0.1425	No
140	SLC25A14	4760180	17541	-2.107	-0.1319	No
141	PHF13	450435	17574	-2.159	-0.1167	No
142	PIM1	630047	17788	-2.608	-0.1078	No
143	MXD3	6220014	17810	-2.641	-0.0883	No
144	PHF12	870400 3130687	18023	-3.139	-0.0752	No
145	RAB11B	3990609	18149	-3.633	-0.0535	No
146	SYT11	630433	18333	-4.582	-0.0275	No
147	DCK	6900411	18439	-5.467	0.0096	No