DatasetSet_03_wtNotch_versus_normalThy.phenotype_wtNotch_versus_normalThy.cls
#wtNotch_versus_normalThy.phenotype_wtNotch_versus_normalThy.cls
#wtNotch_versus_normalThy_repos
Phenotypephenotype_wtNotch_versus_normalThy.cls#wtNotch_versus_normalThy_repos
Upregulated in classnormalThy
GeneSetTTTGCAC,MIR-19A,MIR-19B
Enrichment Score (ES)-0.54944825
Normalized Enrichment Score (NES)-1.5751364
Nominal p-value0.0
FDR q-value0.075656466
FWER p-Value0.476
Table: GSEA Results Summary



Fig 1: Enrichment plot: TTTGCAC,MIR-19A,MIR-19B   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

PROBEDESCRIPTION
(from dataset)
GENE SYMBOLGENE_TITLERANK IN GENE LISTRANK METRIC SCORERUNNING ESCORE ENRICHMENT
1PIK3R317703332683.727-0.0028No
2NCALD7301763173.5410.0059No
3SFRS6602243913.2640.0123No
4SDC13440471 63504085222.8760.0144No
5MID1IP125707396512.6120.0157No
6RAB347704116692.5820.0230No
7DDX3X21900206812.5640.0306No
8ASNA138300418452.2680.0289No
9CHST1506018922.1940.0334No
10ABCB741503249062.1650.0396No
11YTHDF24060332 461027910621.9550.0374No
12PRC1870092 589020410841.9330.0424No
13MBNL2345070710871.9290.0484No
14TNPO2384016411081.8990.0534No
15TNFRSF12A481025312461.7630.0515No
16ARHGAP21210016812761.7340.0555No
17INHBB268009213421.6770.0573No
18SFMBT12360450 237007013721.6540.0609No
19RHOB150030914121.6150.0640No
20ARPP-19570002514541.5810.0668No
21BCL3399044014551.5800.0718No
22PHLDA351039815621.4700.0707No
23EDARADD840180 2360435 456001417341.3200.0655No
24DAG1460053 61034118641.2220.0624No
25SMOC2117017019091.1780.0637No
26TGFBR21780711 1980537 655039820761.0500.0580No
27CS508060021141.0260.0592No
28CNOT72450338 572039721820.9990.0588No
29SOCS3555056322820.9570.0564No
30IVNS1ABP4760601 652011323430.9150.0560No
31CBX15080408 198023923810.8930.0569No
32ARFGEF1676049424490.8500.0559No
33SLC6A8394034125370.7970.0537No
34MIB1380053725470.7890.0557No
35PHTF2659005325590.7820.0576No
36BLCAP399025326180.7490.0568No
37KIF3A5050348 665007927580.6760.0514No
38CYLD659007927610.6740.0534No
39DTNA1340600 1780731 2340278 285013227720.6700.0550No
40GRSF1210018428430.6410.0532No
41MBNL12640762 710004828660.6340.0540No
42CACNA1C1660128 3780300 3870092 6290403 690030129300.6010.0525No
43RUNX3380054629760.5830.0519No
44TRPS187010029830.5790.0534No
45HNRPU652073630090.5690.0539No
46FBXO8460600 361013331960.4990.0453No
47RASSF12760364 485072532230.4910.0454No
48BACE1265043832420.4840.0460No
49PCDHA7185001932510.4790.0471No
50NME760170 1230551 2850333 4200102 4560411 509064733300.4490.0442No
51TRIM33580619 2230280 3990433 620074733480.4460.0447No
52SPG20336020234020.4280.0432No
53SNPH268048434080.4260.0443No
54EPN21340451 6550239 6860020 686040334470.4100.0435No
55SPATA21230215 591054134780.4010.0431No
56KPNA3704008835720.3690.0392No
57TSC1185067235930.3590.0393No
58ZDHHC18620005936070.3540.0397No
59RUNX21400193 423021536280.3450.0397No
60BRWD13130048 3140168 640060136310.3440.0407No
61RNF113990068 508045836360.3420.0416No
62EPC2247009536890.3260.0397No
63RAB8B510692 1980017 3130136 457073938650.2830.0311No
64ABR610079 1170609 3610195 567005039180.2720.0291No
65NPAS277067039400.2670.0288No
66SEMA4C198031539630.2610.0284No
67ARRDC3461039040250.2490.0259No
68FASTK2690053 4280288 4610551 637029240770.2390.0238No
69OLFM13360161 557006640850.2370.0242No
70DHX4036067241850.2210.0195No
71MACF11340132 2370176 2900750 659036442700.2080.0156No
72ACSL4510020 1240041 3190050 4540500 557046343520.1980.0118No
73KPNA451036943550.1980.0123No
74CD69380167 473008843560.1980.0129No
75SOX62940458 4070601 684071743710.1960.0128No
76WDR44130195 1050609 157068545030.1790.0062No
77SOCS53830398 710009346080.1670.0010No
78SPRYD35040346220.1660.0008No
79DLX3319049746290.1650.0010No
80RALGPS13440129 640074646320.1650.0014No
81L3MBTL33800113 666006846450.1630.0013No
82EIF2C1690055146500.1630.0016No
83UBE2D24590671 651044646810.1600.0005No
84FLNC2360048 505027047510.153-0.0028No
85ATRX2340039 3610132 421037348300.146-0.0066No
86SOX211050110 4670041 666033848400.146-0.0067No
87ARID4B730754 666002648440.145-0.0064No
88IGF11990193 3130377 329028048880.141-0.0083No
89SEPT7276068549060.140-0.0087No
90ADCY76290520 756073949190.139-0.0090No
91NRBF2611067249630.134-0.0109No
92SBF2306031550140.131-0.0132No
93QKI5220093 613004450260.130-0.0134No
94UCP34200128 421014851890.119-0.0219No
95PRICKLE278040852330.117-0.0239No
96NEUROD1306061952840.114-0.0262No
97KCNS22510093 645067252950.113-0.0264No
98RAP2C169013253240.111-0.0276No
99TESK2652052453250.111-0.0273No
100ESR14060372 586019354200.106-0.0321No
101PLCB12570050 710010254570.104-0.0337No
102DPYSL5490033354840.102-0.0348No
103RAB2B620009155170.101-0.0362No
104ROBO245013655650.099-0.0385No
105WNT1478014855780.098-0.0388No
106ELMOD245000856490.094-0.0424No
107RXRA380047157120.091-0.0455No
108CLTC659045857480.089-0.0471No
109PPP2R5E70671 212005657920.087-0.0492No
110RGL11500097 690045058030.086-0.0495No
111FNDC3A2690097 329004458050.086-0.0492No
112PTPRG2650524 134002258130.086-0.0493No
113LRCH2290016258550.084-0.0513No
114CLOCK1410070 2940292 339007559140.082-0.0542No
115SULF143057559240.082-0.0545No
116NRP24070400 5860041 665044659800.079-0.0572No
117KCNJ263001960250.078-0.0594No
118USP3378004760270.077-0.0592No
119CCNL113027360910.075-0.0624No
120CCNT22100390 415056361140.074-0.0634No
121BSN527034761370.073-0.0643No
122PCDHA1940026 54048461430.073-0.0644No
123SPIRE1610286 2230142 312015461720.072-0.0657No
124NRK459060962100.071-0.0675No
125KCNA4232070662890.068-0.0715No
126STK38710011463060.067-0.0722No
127MLLT6387016863770.065-0.0758No
128BMPR25340066 696032864130.064-0.0775No
129GPR137B199060365280.060-0.0836No
130STK35236012166750.056-0.0914No
131CTGF454057766890.055-0.0919No
132ST8SIA3694042768050.052-0.0981No
133VPS4B344033268110.052-0.0982No
134DOCK33290273 3360497 285006868340.051-0.0992No
135GDA329043568960.050-0.1024No
136ZNF31770193 2320047 257027369050.050-0.1027No
137KLF10485005669760.048-0.1064No
138EXOC5700071170340.047-0.1093No
139ZBTB4645044170420.046-0.1096No
140PDE7B570005671500.044-0.1153No
141ASXL213067071930.043-0.1175No
142WDFY33610041 4560333 457027372200.042-0.1187No
143SLC26A71850398 383037772980.041-0.1228No
144RTN14150452 485017673240.040-0.1241No
145ETV170735 2940603 508046373390.040-0.1247No
146AP1G1236067173990.039-0.1278No
147IGFBP3237050075620.036-0.1366No
148RHEBL1281057677020.033-0.1441No
149SLMAP3120093 4760128 539052877240.032-0.1451No
150EFNB2534013678120.031-0.1498No
151WNT3236068578320.031-0.1507No
152CAB39572047178570.030-0.1520No
153ST8SIA42680605 306021579110.029-0.1548No
154ARHGEF12399019579370.029-0.1560No
155PLAA60706 637036980170.027-0.1603No
156EMX2166009280310.027-0.1609No
157ARHGAP12105018182210.023-0.1712No
158PCDHA3384040282250.023-0.1713No
159BAMBI665046383000.022-0.1753No
160SLC35F1385016483010.022-0.1752No
161WDR20124037383600.021-0.1783No
162LRP21400204 329070683620.021-0.1783No
163ATP2B2378039784400.020-0.1824No
164PTP4A113069284970.019-0.1854No
165GRIN2A655053885470.018-0.1881No
166CGN5890139 6370167 640053785490.018-0.1881No
167NDFIP2407045185840.017-0.1899No
168ITSN1264057786310.016-0.1923No
169ZBTB10420013286590.016-0.1938No
170SHANK2150045286840.016-0.1950No
171EPHB3665034187970.014-0.2011No
172LPP166054188200.013-0.2023No
173CALM138012888470.013-0.2037No
174PCDHA10383072589730.011-0.2105No
175ZFPM246007290010.010-0.2119No
176TAF4145017090020.010-0.2119No
177PLXNC1586031590310.010-0.2134No
178GULP12230725 2350039 557044691560.008-0.2202No
179AKAP1110148 1740735 2260019 700056391660.008-0.2206No
180HNRPF67013891760.008-0.2211No
181CBLN2476013293470.005-0.2304No
182ADAMTS18569000894080.004-0.2337No
183F3294018095530.002-0.2415No
184RFX43710100 534021595700.002-0.2424No
185ZMYND11630181 2570019 4850138 536004095890.002-0.2434No
186TGM384057695940.001-0.2436No
187SLC9A24920022 59101339773-0.001-0.2534No
188RAI2677033310056-0.005-0.2688No
189RAPGEF4610056310117-0.006-0.2721No
190IGSF3645052410165-0.007-0.2746No
191ATP11A1240717 557060310216-0.008-0.2773No
192DCBLD2589033310232-0.008-0.2781No
193BTBD773028810256-0.008-0.2793No
194PCDHA5297034710288-0.009-0.2810No
195PCDHA12281021510590-0.013-0.2975No
196COL19A1622044110649-0.014-0.3006No
197EDG1420061910694-0.015-0.3030No
198ELL2642009110848-0.017-0.3113No
199ABCA1629015610877-0.018-0.3128No
200DDX3Y1580278 420051910904-0.018-0.3141No
201MAP3K122470373 642016210936-0.019-0.3158No
202SLC24A4210048710963-0.019-0.3171No
203EREG50519 492012910971-0.019-0.3174No
204PITX1655054111041-0.020-0.3212No
205TNRC6A1240537 6130037 620001011401-0.027-0.3407No
206RAP1A109002511445-0.027-0.3430No
207FMR1505007511491-0.028-0.3454No
208PPARA206002611623-0.031-0.3525No
209ARMC8520408 940132 4060368 421010212065-0.040-0.3765No
210RBMS3611072212104-0.041-0.3784No
211ANXA7611044612121-0.041-0.3792No
212ARHGAP52510619 336003512137-0.042-0.3799No
213PCDHA11151025312203-0.043-0.3833No
214BNC2481060312219-0.044-0.3840No
215HLF237011312240-0.044-0.3849No
216B4GALT5123069212297-0.045-0.3878No
217TGOLN2492043312308-0.046-0.3882No
218CSMD1178067212363-0.047-0.3911No
219POU3F2662048412365-0.047-0.3910No
220PNRC136002512370-0.047-0.3910No
221PCDHA6780333 237028012619-0.054-0.4044No
222FOXF2124009112638-0.054-0.4052No
223SYT184036412644-0.055-0.4053No
224SV2A1450039 557068512880-0.062-0.4180No
225POU4F1226031512887-0.062-0.4182No
226PGM2L1235003512985-0.066-0.4233No
227RAB183120575 459057713032-0.067-0.4256No
228WEE1339007013037-0.067-0.4256No
229DBN1710053713092-0.069-0.4283No
230CNTFR4480092 620006413147-0.072-0.4310No
231PCDH10940014 1190592 319020413172-0.073-0.4321No
232ZFYVE96980288 710001713178-0.073-0.4321No
233MINK1586064713258-0.076-0.4362No
234TBC1D8234025313325-0.080-0.4396No
235ERBB44610400 481001713448-0.085-0.4460No
236TOR1B105039013502-0.088-0.4486No
237SLC24A3508070713619-0.094-0.4547No
238GRM7423011013782-0.105-0.4632No
239FZD8199005313800-0.106-0.4638No
240WDR26109013813808-0.107-0.4638No
241SNX17670341 651007013852-0.110-0.4659No
242CSNK1G1840082 1230575 394064713886-0.112-0.4673No
243DLC11090632 645059413941-0.116-0.4699No
244LIF1410373 2060129 399033813982-0.119-0.4717No
245ARFIP1313060114131-0.132-0.4794No
246RIN2245018414158-0.135-0.4804No
247PDE5A13007214201-0.139-0.4822No
248CNOT42320242 676070614209-0.140-0.4822No
249RAP1B371013814317-0.151-0.4875No
250SOX52370576 2900167 3190128 505052814330-0.152-0.4877No
251RFX154037314395-0.158-0.4907No
252CAST3850082 5420671 620015614419-0.161-0.4915No
253TBK1569033814489-0.168-0.4947No
254SLC9A64570091 710009714494-0.168-0.4944No
255LNPEP1170092 1940093 312002514609-0.182-0.5001No
256SH3D19602052014621-0.184-0.5001No
257ATP2C12630446 652025314694-0.195-0.5034No
258NIPA138060014775-0.209-0.5071No
259STAT5B620002614806-0.214-0.5081No
260RNF2234049714881-0.230-0.5114No
261NR4A26027314939-0.245-0.5137No
262SMAD5570049715143-0.288-0.5239No
263ST3GAL5251044615167-0.296-0.5242No
264MEF2D569057615207-0.312-0.5254No
265ARHGAP12810010 527006415228-0.319-0.5255No
266ADAM123390132 407034715240-0.322-0.5250No
267CAMSAP11580131 2120494 662044615319-0.344-0.5282No
268OGT2360131 461033315489-0.403-0.5362No
269RNF1112970072 3140112 513064715500-0.410-0.5354No
270SLC31A2145057715516-0.417-0.5349No
271PAPD41580673 730605 527011215531-0.425-0.5343No
272MYLIP50717 405067215540-0.428-0.5334No
273ADCY9569016815767-0.529-0.5441No
274RBMS1640001415793-0.538-0.5437No
275TMEM32117045215815-0.547-0.5431No
276CBFB1850551 265003515869-0.581-0.5442No
277TRAK2430736 177002615874-0.585-0.5425No
278RNF381940746 3140133 384060115882-0.588-0.5410No
279ACBD53440397 602060015885-0.591-0.5393No
280DDX62630025 677040815993-0.647-0.5430No
281GRK6150005316014-0.659-0.5420No
282ELOVL5380017016062-0.687-0.5424No
283DICER154028616132-0.731-0.5439No
284DNAJA22630253 686035816235-0.794-0.5469Yes
285PFKFB363070616270-0.815-0.5462Yes
286RAB5B130397 1980273 690073116275-0.819-0.5438Yes
287KIT704009516331-0.857-0.5441Yes
288CCRN4L50438 513037216346-0.865-0.5421Yes
289ARIH2281002516354-0.874-0.5397Yes
290ZDHHC7150001416355-0.874-0.5369Yes
291TMEPAI134025316447-0.925-0.5389Yes
292LRRK1281060916481-0.952-0.5377Yes
293ARL6IP2770494 4590176 662042716523-0.981-0.5368Yes
294SPHK22030487 4120670 485011416532-0.987-0.5341Yes
295FBXO281340358 473010016564-1.000-0.5326Yes
296HBP12510102 3130010 421061916575-1.003-0.5299Yes
297SGK1400131 248005616583-1.006-0.5271Yes
298MAPK6676052016592-1.010-0.5243Yes
299UBL3645045816700-1.088-0.5267Yes
300HIPK111019316748-1.122-0.5257Yes
301MECP2194045016762-1.137-0.5228Yes
302TTYH3210008216791-1.163-0.5206Yes
303ATXN1555015616822-1.187-0.5184Yes
304RAB21557007016860-1.212-0.5166Yes
305FEM1C60300 6130717 698016416931-1.273-0.5164Yes
306CRSP7423040817010-1.355-0.5163Yes
307SOX4226009117066-1.434-0.5147Yes
308MAPK14529073117073-1.446-0.5105Yes
309ADIPOR2151003517152-1.536-0.5098Yes
310SMARCD2383061917158-1.544-0.5052Yes
311RAF1177060017237-1.646-0.5042Yes
312SLC9A1265009317245-1.656-0.4993Yes
313MAP3K14589043517267-1.682-0.4951Yes
314PFN1613013217292-1.714-0.4909Yes
315ELK3460377 1400762 371049717322-1.738-0.4870Yes
316ELAVL1473049717355-1.797-0.4830Yes
317FOXP1651043317433-1.914-0.4811Yes
318UBE2A401056317462-1.967-0.4763Yes
319EPS15420021517516-2.059-0.4727Yes
320PKNOX1421045217526-2.079-0.4665Yes
321SNIP1536009217536-2.095-0.4603Yes
322ITPR1345051917548-2.119-0.4542Yes
323PITPNM2158004417562-2.144-0.4480Yes
324BZRAP1529048717569-2.155-0.4415Yes
325PHF1345043517574-2.159-0.4348Yes
326ENPP5178033817598-2.205-0.4290Yes
327IMPDH13190735 705054617606-2.217-0.4223Yes
328VGLL4686046317663-2.355-0.4179Yes
329THRAP2492060017710-2.437-0.4126Yes
330ITGA6383012917737-2.489-0.4061Yes
331ATG16L1539029217931-2.941-0.4073Yes
332IGF2R157040217944-2.966-0.3985Yes
333PHF12870400 313068718023-3.139-0.3927Yes
334GJA1522073118083-3.378-0.3852Yes
335RAB33B385068518136-3.572-0.3766Yes
336ATP6V1B2406052818138-3.594-0.3652Yes
337ZFYVE26686015218236-4.044-0.3576Yes
338ARC461009318259-4.166-0.3455Yes
339SPEN206004118262-4.181-0.3323Yes
340SOCS173013918267-4.197-0.3191Yes
341LBH7009318305-4.390-0.3071Yes
342KLF13467056318309-4.420-0.2932Yes
343PSAP281033818317-4.455-0.2793Yes
344SYT1163043318333-4.582-0.2655Yes
345CBX7394003518363-4.752-0.2519Yes
346DNAJB1109004118371-4.807-0.2370Yes
347WBP2317012818414-5.182-0.2227Yes
348TNIP12510279 5900041 651043518425-5.313-0.2063Yes
349ARRDC4281001918429-5.374-0.1893Yes
350CCM2567046518496-6.023-0.1737Yes
351PTK2B473041118521-6.456-0.1544Yes
352WDR11090129 399012118543-6.863-0.1337Yes
353ATP10A478005018576-7.882-0.1103Yes
354CCND2534016718589-8.378-0.0842Yes
355LRIG1105013618597-8.598-0.0571Yes
356SMOC184003918602-8.820-0.0292Yes
357BTG14200735 6040131 620013318614-9.3590.0001Yes
Table: GSEA details [plain text format]



Fig 2: TTTGCAC,MIR-19A,MIR-19B   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet



Fig 3: TTTGCAC,MIR-19A,MIR-19B: Random ES distribution   
Gene set null distribution of ES for TTTGCAC,MIR-19A,MIR-19B