Details for gene set TTGCACT,MIR-130A,MIR-301,MIR-130B[GSEA]

Table: GSEA Results Summary

Dataset	Set_03_wtNotch_versus_normalThy.phenotype_wtNotch_versus_normalThy.cls #wtNotch_versus_normalThy.phenotype_wtNotch_versus_normalThy.cls #wtNotch_versus_normalThy_repos
Phenotype	phenotype_wtNotch_versus_normalThy.cls#wtNotch_versus_normalThy_repos
Upregulated in class	normalThy
GeneSet	TTGCACT,MIR-130A,MIR-301,MIR-130B
Enrichment Score (ES)	-0.5742347
Normalized Enrichment Score (NES)	-1.6015694
Nominal p-value	0.0
FDR q-value	0.080106795
FWER p-Value	0.322

Table: GSEA details [plain text format]
	PROBE	DESCRIPTION (from dataset)	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	SKP1A	2450102	293	3.640	0.0023	No
2	MID1IP1	2570739	651	2.612	-0.0041	No
3	RAB34	770411	669	2.582	0.0079	No
4	CHST1	50601	892	2.194	0.0068	No
5	ABCB7	4150324	906	2.165	0.0169	No
6	YTHDF2	4060332 4610279	1062	1.955	0.0183	No
7	CUL3	1850520	1147	1.860	0.0230	No
8	ARHGAP21	2100168	1276	1.734	0.0248	No
9	INHBB	2680092	1342	1.677	0.0296	No
10	SFMBT1	2360450 2370070	1372	1.654	0.0363	No
11	HABP4	840487	1855	1.231	0.0162	No
12	SMOC2	1170170	1909	1.178	0.0192	No
13	TGFBR2	1780711 1980537 6550398	2076	1.050	0.0155	No
14	CNOT7	2450338 5720397	2182	0.999	0.0147	No
15	DPYSL2	2100427 3130112 5700324	2183	0.999	0.0197	No
16	SUV39H1	630112	2261	0.973	0.0204	No
17	MIB1	3800537	2547	0.789	0.0088	No
18	BLCAP	3990253	2618	0.749	0.0088	No
19	CYLD	6590079	2761	0.674	0.0044	No
20	MBNL1	2640762 7100048	2866	0.634	0.0019	No
21	TPP1	3990446	2906	0.614	0.0029	No
22	SNX2	2470068 3360364 6510064	2955	0.591	0.0032	No
23	RUNX3	3800546	2976	0.583	0.0051	No
24	TRPS1	870100	2983	0.579	0.0076	No
25	ACSL1	2900520	3071	0.548	0.0056	No
26	TIMP2	4780609	3195	0.500	0.0014	No
27	RASSF1	2760364 4850725	3223	0.491	0.0024	No
28	NME7	60170 1230551 2850333 4200102 4560411 5090647	3330	0.449	-0.0011	No
29	EDA	6420441	3368	0.441	-0.0009	No
30	SPG20	3360202	3402	0.428	-0.0005	No
31	SNPH	2680484	3408	0.426	0.0013	No
32	ERBB2IP	580253 1090672	3449	0.410	0.0012	No
33	SPATA2	1230215 5910541	3478	0.401	0.0017	No
34	TSC1	1850672	3593	0.359	-0.0027	No
35	RUNX2	1400193 4230215	3628	0.345	-0.0029	No
36	BRWD1	3130048 3140168 6400601	3631	0.344	-0.0012	No
37	PRKD3	5220520 5890519	3648	0.337	-0.0004	No
38	STC1	360161	3684	0.328	-0.0007	No
39	EPC2	2470095	3689	0.326	0.0007	No
40	TARDBP	870390 2350093	3982	0.257	-0.0139	No
41	ARRDC3	4610390	4025	0.249	-0.0149	No
42	FASTK	2690053 4280288 4610551 6370292	4077	0.239	-0.0165	No
43	LDLR	5670386	4210	0.217	-0.0226	No
44	ACSL4	510020 1240041 3190050 4540500 5570463	4352	0.198	-0.0293	No
45	CD69	380167 4730088	4356	0.198	-0.0285	No
46	NPAT	3800594 4670026	4488	0.181	-0.0347	No
47	SOCS5	3830398 7100093	4608	0.167	-0.0404	No
48	EIF2C1	6900551	4650	0.163	-0.0418	No
49	UBE2D2	4590671 6510446	4681	0.160	-0.0426	No
50	ATRX	2340039 3610132 4210373	4830	0.146	-0.0499	No
51	SOX21	1050110 4670041 6660338	4840	0.146	-0.0497	No
52	ARID4B	730754 6660026	4844	0.145	-0.0491	No
53	RASD1	2450463	4877	0.142	-0.0502	No
54	NRBF2	6110672	4963	0.134	-0.0541	No
55	PDGFRA	2940332	5000	0.131	-0.0554	No
56	QKI	5220093 6130044	5026	0.130	-0.0561	No
57	UCP3	4200128 4210148	5189	0.119	-0.0644	No
58	NEUROD1	3060619	5284	0.114	-0.0689	No
59	RAP2C	1690132	5324	0.111	-0.0705	No
60	TESK2	6520524	5325	0.111	-0.0699	No
61	TRIM3	5570156	5367	0.109	-0.0716	No
62	HOXA3	3610632 6020358	5397	0.107	-0.0727	No
63	ESR1	4060372 5860193	5420	0.106	-0.0733	No
64	EIF2C4	2940577 5900563	5442	0.105	-0.0740	No
65	HOXB3	520292	5445	0.105	-0.0735	No
66	PLCB1	2570050 7100102	5457	0.104	-0.0736	No
67	FSTL5	770280	5487	0.102	-0.0747	No
68	ITPK1	3360056	5493	0.102	-0.0744	No
69	ROBO2	450136	5565	0.099	-0.0778	No
70	WNT1	4780148	5578	0.098	-0.0780	No
71	RXRA	3800471	5712	0.091	-0.0848	No
72	CLTC	6590458	5748	0.089	-0.0862	No
73	PTPRG	2650524 1340022	5813	0.086	-0.0893	No
74	LRCH2	2900162	5855	0.084	-0.0911	No
75	CLOCK	1410070 2940292 3390075	5914	0.082	-0.0938	No
76	SULF1	430575	5924	0.082	-0.0939	No
77	NRP2	4070400 5860041 6650446	5980	0.079	-0.0965	No
78	USP33	780047	6027	0.077	-0.0986	No
79	HIVEP2	6520538	6129	0.074	-0.1038	No
80	PTPRM	6370136	6230	0.070	-0.1089	No
81	MAMDC1	3710129 4480075	6361	0.066	-0.1156	No
82	MLLT6	3870168	6377	0.065	-0.1161	No
83	BMPR2	5340066 6960328	6413	0.064	-0.1177	No
84	PTGFRN	4120524	6582	0.058	-0.1266	No
85	PRKAA1	510156	6589	0.058	-0.1266	No
86	ST8SIA3	6940427	6805	0.052	-0.1380	No
87	SCRT1	6760736	6815	0.052	-0.1383	No
88	DOCK3	3290273 3360497 2850068	6834	0.051	-0.1390	No
89	MAP3K9	3290707	6885	0.050	-0.1415	No
90	GDA	3290435	6896	0.050	-0.1418	No
91	ZNF3	1770193 2320047 2570273	6905	0.050	-0.1420	No
92	NHLH2	6200021	6928	0.049	-0.1429	No
93	EXOC5	7000711	7034	0.047	-0.1484	No
94	ZBTB4	6450441	7042	0.046	-0.1485	No
95	MAPRE3	7050504	7047	0.046	-0.1485	No
96	ASXL2	130670	7193	0.043	-0.1562	No
97	WDFY3	3610041 4560333 4570273	7220	0.042	-0.1574	No
98	RTN1	4150452 4850176	7324	0.040	-0.1628	No
99	AP1G1	2360671	7399	0.039	-0.1667	No
100	SLMAP	3120093 4760128 5390528	7724	0.032	-0.1842	No
101	EFNB2	5340136	7812	0.031	-0.1887	No
102	ARHGEF12	3990195	7937	0.029	-0.1953	No
103	ATRN	870735 3360390	7994	0.028	-0.1983	No
104	PLAA	60706 6370369	8017	0.027	-0.1993	No
105	EMX2	1660092	8031	0.027	-0.1999	No
106	ARHGAP12	1050181	8221	0.023	-0.2101	No
107	WDR20	1240373	8360	0.021	-0.2175	No
108	STARD13	540722	8392	0.021	-0.2191	No
109	CSF1	3120400	8401	0.020	-0.2194	No
110	ATP2B2	3780397	8440	0.020	-0.2214	No
111	PTP4A1	130692	8497	0.019	-0.2243	No
112	NEUROG1	380341	8575	0.017	-0.2284	No
113	ST18	5720537	8661	0.016	-0.2330	No
114	MYT1	6770524	8683	0.016	-0.2341	No
115	SHANK2	1500452	8684	0.016	-0.2340	No
116	BHLHB3	3450438	8696	0.015	-0.2345	No
117	PPARG	1990168 2680603 6130632	8789	0.014	-0.2394	No
118	NR3C2	2480324 6400093	8911	0.012	-0.2460	No
119	ZFPM2	460072	9001	0.010	-0.2508	No
120	TAF4	1450170	9002	0.010	-0.2507	No
121	AKAP1	110148 1740735 2260019 7000563	9166	0.008	-0.2596	No
122	GAP43	3130504	9390	0.005	-0.2717	No
123	MEOX2	6400288	9396	0.005	-0.2719	No
124	ADAMTS18	5690008	9408	0.004	-0.2725	No
125	SNX5	1570021 6860609	9426	0.004	-0.2734	No
126	BTBD3	1980041 2510577 3190053 4200746	9535	0.002	-0.2793	No
127	ACVR1	6840671	9671	0.000	-0.2867	No
128	SLC9A2	4920022 5910133	9773	-0.001	-0.2922	No
129	LRP8	3610746 5360035	9894	-0.003	-0.2987	No
130	TRIM2	430546 1170286	10028	-0.005	-0.3059	No
131	RAI2	6770333	10056	-0.005	-0.3073	No
132	RAPGEF4	6100563	10117	-0.006	-0.3106	No
133	ATP11A	1240717 5570603	10216	-0.008	-0.3159	No
134	CANX	4760402	10218	-0.008	-0.3159	No
135	DCBLD2	5890333	10232	-0.008	-0.3166	No
136	BIRC6	70148	10241	-0.008	-0.3170	No
137	BTBD7	730288	10256	-0.008	-0.3177	No
138	WNK3	4060053	10427	-0.011	-0.3269	No
139	UBE2D1	1850400	10642	-0.014	-0.3385	No
140	COL19A1	6220441	10649	-0.014	-0.3387	No
141	EDG1	4200619	10694	-0.015	-0.3411	No
142	PAFAH1B1	4230333 6420121 6450066	10756	-0.016	-0.3443	No
143	ABCA1	6290156	10877	-0.018	-0.3508	No
144	MAP3K12	2470373 6420162	10936	-0.019	-0.3538	No
145	ABHD3	2370091	10947	-0.019	-0.3543	No
146	EREG	50519 4920129	10971	-0.019	-0.3554	No
147	MAFB	1230471	11005	-0.020	-0.3571	No
148	TNRC6A	1240537 6130037 6200010	11401	-0.027	-0.3785	No
149	CLCN5	4200390	11448	-0.027	-0.3809	No
150	FMR1	5050075	11491	-0.028	-0.3830	No
151	CREB5	2320368	11678	-0.032	-0.3930	No
152	ZCCHC14	5900288	11806	-0.034	-0.3997	No
153	AKAP7	4610044	12155	-0.042	-0.4185	No
154	M6PR	2480458 3290593 3840324	12249	-0.044	-0.4233	No
155	HOXA5	6840026	12273	-0.045	-0.4244	No
156	B4GALT5	1230692	12297	-0.045	-0.4254	No
157	CSMD1	1780672	12363	-0.047	-0.4287	No
158	POU3F2	6620484	12365	-0.047	-0.4285	No
159	PHACTR2	1580154	12464	-0.049	-0.4336	No
160	FOXF2	1240091	12638	-0.054	-0.4428	No
161	ROBO1	3710398	12871	-0.062	-0.4551	No
162	POU4F1	2260315	12887	-0.062	-0.4556	No
163	PGM2L1	2350035	12985	-0.066	-0.4606	No
164	WEE1	3390070	13037	-0.067	-0.4630	No
165	ADCY2	4610100	13044	-0.067	-0.4630	No
166	SNAP25	360520	13163	-0.072	-0.4691	No
167	ZFYVE9	6980288 7100017	13178	-0.073	-0.4694	No
168	RAB5A	6520324	13190	-0.074	-0.4697	No
169	TBC1D8	2340253	13325	-0.080	-0.4766	No
170	NPTX1	3710736	13357	-0.081	-0.4779	No
171	ERBB4	4610400 4810017	13448	-0.085	-0.4823	No
172	DLL1	1770377	13614	-0.093	-0.4909	No
173	SLC24A3	5080707	13619	-0.094	-0.4906	No
174	R3HDM1	940685 3290161	13761	-0.104	-0.4978	No
175	GRM7	4230110	13782	-0.105	-0.4983	No
176	CSNK1G1	840082 1230575 3940647	13886	-0.112	-0.5034	No
177	SASH1	4070270	13899	-0.113	-0.5035	No
178	LRP4	1740253	13967	-0.118	-0.5065	No
179	ARFIP1	3130601	14131	-0.132	-0.5147	No
180	MAT2B	1690139 2510706	14187	-0.137	-0.5171	No
181	CNOT4	2320242 6760706	14209	-0.140	-0.5175	No
182	SOX5	2370576 2900167 3190128 5050528	14330	-0.152	-0.5233	No
183	MLLT10	1410288 3290142	14539	-0.172	-0.5337	No
184	LNPEP	1170092 1940093 3120025	14609	-0.182	-0.5366	No
185	SH3D19	6020520	14621	-0.184	-0.5363	No
186	ABCC5	2100600 5050692	14706	-0.197	-0.5399	No
187	SOCS6	1170347 7100280	14732	-0.201	-0.5402	No
188	DNM2	50176 3170279	14772	-0.208	-0.5413	No
189	NIPA1	380600	14775	-0.209	-0.5404	No
190	SMAD5	5700497	15143	-0.288	-0.5589	No
191	WNT2B	3130088 5960575	15170	-0.297	-0.5588	No
192	IRF1	2340152 3450592 6290121 6980577	15180	-0.299	-0.5578	No
193	ARHGAP1	2810010 5270064	15228	-0.319	-0.5588	No
194	ADAM12	3390132 4070347	15240	-0.322	-0.5578	No
195	CHD9	430037 2570129 5420398	15277	-0.333	-0.5581	No
196	SNF1LK	6110403	15440	-0.381	-0.5650	No
197	PIGA	1940435 5290692	15487	-0.403	-0.5655	No
198	OGT	2360131 4610333	15489	-0.403	-0.5635	No
199	PAPD4	1580673 730605 5270112	15531	-0.425	-0.5636	No
200	NPNT	130301	15551	-0.434	-0.5625	No
201	RHOT1	6760692	15710	-0.501	-0.5686	No
202	TMEM32	1170452	15815	-0.547	-0.5715	Yes
203	RKHD1	6860577	15837	-0.560	-0.5698	Yes
204	E2F7	4200056	15843	-0.563	-0.5673	Yes
205	RNF38	1940746 3140133 3840601	15882	-0.588	-0.5664	Yes
206	ACBD5	3440397 6020600	15885	-0.591	-0.5636	Yes
207	DDX6	2630025 6770408	15993	-0.647	-0.5661	Yes
208	DICER1	540286	16132	-0.731	-0.5700	Yes
209	CALM2	6620463	16171	-0.751	-0.5683	Yes
210	MTF1	520427 2340364	16221	-0.781	-0.5671	Yes
211	PFKFB3	630706	16270	-0.815	-0.5656	Yes
212	RAB5B	130397 1980273 6900731	16275	-0.819	-0.5617	Yes
213	KIT	7040095	16331	-0.857	-0.5604	Yes
214	CCRN4L	50438 5130372	16346	-0.865	-0.5568	Yes
215	TMEPAI	1340253	16447	-0.925	-0.5577	Yes
216	SPHK2	2030487 4120670 4850114	16532	-0.987	-0.5573	Yes
217	FBXO28	1340358 4730100	16564	-1.000	-0.5540	Yes
218	HBP1	2510102 3130010 4210619	16575	-1.003	-0.5495	Yes
219	ULK2	50041 5050176	16651	-1.045	-0.5483	Yes
220	MYB	1660494 5860451 6130706	16734	-1.112	-0.5472	Yes
221	MECP2	1940450	16762	-1.137	-0.5430	Yes
222	TTYH3	2100082	16791	-1.163	-0.5387	Yes
223	ATXN1	5550156	16822	-1.187	-0.5344	Yes
224	RALBP1	4780632	16852	-1.205	-0.5299	Yes
225	USP48	2480010	17013	-1.358	-0.5319	Yes
226	SOX4	2260091	17066	-1.434	-0.5275	Yes
227	VPS24	3120687	17099	-1.469	-0.5219	Yes
228	SMARCD2	3830619	17158	-1.544	-0.5173	Yes
229	MAP3K14	5890435	17267	-1.682	-0.5148	Yes
230	CNIH	2190484 5080609	17304	-1.726	-0.5081	Yes
231	ELK3	460377 1400762 3710497	17322	-1.738	-0.5003	Yes
232	BAZ2A	730184	17477	-1.996	-0.4987	Yes
233	MTMR12	7000181	17502	-2.035	-0.4898	Yes
234	EPS15	4200215	17516	-2.059	-0.4802	Yes
235	SNIP1	5360092	17536	-2.095	-0.4707	Yes
236	ITPR1	3450519	17548	-2.119	-0.4607	Yes
237	PITPNM2	1580044	17562	-2.144	-0.4507	Yes
238	BZRAP1	5290487	17569	-2.155	-0.4402	Yes
239	HRB	1660397 6110398	17588	-2.184	-0.4303	Yes
240	ENPP5	1780338	17598	-2.205	-0.4197	Yes
241	PELI1	3870215 6900040	17622	-2.263	-0.4096	Yes
242	HECA	3310612	17645	-2.320	-0.3992	Yes
243	VGLL4	6860463	17663	-2.355	-0.3883	Yes
244	NCOA1	3610438	17669	-2.367	-0.3767	Yes
245	STX6	4850750 6770278	17794	-2.615	-0.3704	Yes
246	ATG16L1	5390292	17931	-2.941	-0.3631	Yes
247	PHF12	870400 3130687	18023	-3.139	-0.3523	Yes
248	GJA1	5220731	18083	-3.378	-0.3386	Yes
249	ATP6V1B2	4060528	18138	-3.594	-0.3235	Yes
250	BACH2	6760131	18172	-3.712	-0.3067	Yes
251	ZFYVE26	6860152	18236	-4.044	-0.2899	Yes
252	SPEN	2060041	18262	-4.181	-0.2703	Yes
253	KLF13	4670563	18309	-4.420	-0.2507	Yes
254	PSAP	2810338	18317	-4.455	-0.2288	Yes
255	GADD45A	2900717	18319	-4.477	-0.2064	Yes
256	NDEL1	2370465	18364	-4.753	-0.1850	Yes
257	MAML1	2760008	18494	-5.971	-0.1621	Yes
258	WDR1	1090129 3990121	18543	-6.863	-0.1303	Yes
259	LRIG1	1050136	18597	-8.598	-0.0901	Yes
260	SMOC1	840039	18602	-8.820	-0.0462	Yes
261	BTG1	4200735 6040131 6200133	18614	-9.359	0.0001	Yes