Details for gene set V$USF

Table: GSEA Results Summary

Dataset	Set_03_absentNotch_versus_wtNotch.phenotype_absentNotch_versus_wtNotch.cls #wtNotch_versus_absentNotch
Phenotype	phenotype_absentNotch_versus_wtNotch.cls#wtNotch_versus_absentNotch
Upregulated in class	absentNotch
GeneSet	V$USF_Q6
Enrichment Score (ES)	-0.51688975
Normalized Enrichment Score (NES)	-1.5367119
Nominal p-value	0.0
FDR q-value	0.18651685
FWER p-Value	0.764

Table: GSEA details [plain text format]
	PROBE	DESCRIPTION (from dataset)	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	NCALD	730176	299	1.592	0.0037	No
2	ANXA6	2190014	376	1.476	0.0181	No
3	CHD4	5420059 6130338 6380717	406	1.424	0.0344	No
4	ARSA	5570717	439	1.377	0.0499	No
5	PPP1R9B	3130619	585	1.227	0.0574	No
6	HMGN2	3140091	762	1.096	0.0616	No
7	RAMP2	6860037	843	1.033	0.0702	No
8	G6PC3	1580487 5390253	997	0.951	0.0738	No
9	CENTB5	5690128	1103	0.898	0.0793	No
10	PIK3R3	1770333	1147	0.876	0.0880	No
11	NCKIPSD	2940156	1623	0.661	0.0705	No
12	AP1GBP1	2510372	1679	0.638	0.0755	No
13	RANBP1	430215 1090180	2036	0.519	0.0627	No
14	PRPS1	6350129	2061	0.513	0.0678	No
15	ZFX	5900400	2095	0.498	0.0723	No
16	VPS33A	780113	2281	0.449	0.0679	No
17	GTF2H1	2570746 2650148	2403	0.412	0.0665	No
18	BRDT	3940102	2703	0.342	0.0546	No
19	SFRS14	2970497	2771	0.330	0.0551	No
20	ZZZ3	780133 2320239 2640452 5080706 6550341	2870	0.311	0.0536	No
21	SNX2	2470068 3360364 6510064	2944	0.298	0.0534	No
22	SGOL1	1980075 5220092 6020711	2993	0.288	0.0544	No
23	NR5A1	70707	3063	0.278	0.0542	No
24	GTF2A1	4120138 4920524 5390110 1230397	3090	0.274	0.0562	No
25	ARL3	5690725	3194	0.254	0.0538	No
26	MAPKAPK3	630520	3267	0.243	0.0529	No
27	SLC35A5	2970670 4480546	3358	0.231	0.0509	No
28	DIRC2	2810494	3362	0.230	0.0537	No
29	SCYL1	5050717	3364	0.230	0.0565	No
30	EEF1B2	4850400 6130161	3476	0.215	0.0532	No
31	DUSP7	2940309	3538	0.207	0.0525	No
32	SUPT16H	1240333	3594	0.200	0.0520	No
33	COPS7A	3940458 7000022	3769	0.182	0.0448	No
34	PANK3	3060687	3776	0.182	0.0468	No
35	NFX1	450504	3877	0.172	0.0435	No
36	GATA5	430465	3902	0.169	0.0443	No
37	EGLN2	540086	4060	0.156	0.0378	No
38	NEUROD1	3060619	4179	0.145	0.0332	No
39	TOM1	940398 2190053	4236	0.141	0.0319	No
40	POLR3C	6940546	4305	0.136	0.0300	No
41	SFXN2	2650563 3140095 3830762 3870398	4355	0.132	0.0290	No
42	HOXB7	4540706 4610358	4493	0.123	0.0231	No
43	JMJD2C	3290341	4560	0.119	0.0210	No
44	DLX2	2320438 4200673	4635	0.115	0.0184	No
45	RBBP6	2320129	4707	0.111	0.0160	No
46	HOXA9	610494 4730040 5130601	4718	0.111	0.0168	No
47	DUSP9	630605	4722	0.111	0.0180	No
48	NRIP3	1340372	4783	0.106	0.0161	No
49	SOCS5	3830398 7100093	4848	0.103	0.0139	No
50	PCTK2	5700673	5204	0.086	-0.0042	No
51	RAD9A	110300 1940632 3990390 6040014	5268	0.084	-0.0066	No
52	HRH3	6180040	5302	0.082	-0.0074	No
53	FGF14	2630390 3520075 6770048	5366	0.079	-0.0098	No
54	HOXC13	4070722	5476	0.076	-0.0147	No
55	SNX16	870446	5571	0.072	-0.0189	No
56	DCTN3	6840131	5622	0.070	-0.0208	No
57	TAC1	7000195 380706	5645	0.069	-0.0211	No
58	HNRPH2	2630040 5720671	5769	0.065	-0.0270	No
59	RARG	6760136	5805	0.064	-0.0281	No
60	SLC12A6	610278 1980035 5340671	5911	0.060	-0.0330	No
61	HOXB2	6450592	5964	0.059	-0.0351	No
62	PURA	3870156	6196	0.053	-0.0469	No
63	GLA	4610364	6348	0.049	-0.0545	No
64	IRS4	430341 1190450	6513	0.045	-0.0628	No
65	MAX	5220021	6589	0.043	-0.0664	No
66	RNF146	1660735	6664	0.042	-0.0698	No
67	ELAVL3	2850014	6851	0.038	-0.0794	No
68	MPV17	1190133 4070427 4570577	7034	0.035	-0.0889	No
69	PHYHIP	1170377	7552	0.025	-0.1166	No
70	HNRPD	4120021	7947	0.019	-0.1377	No
71	UBE2B	4780497	8000	0.018	-0.1403	No
72	SLC4A10	2060670	8480	0.011	-0.1661	No
73	AMPD2	630093 1170070	8545	0.010	-0.1695	No
74	EIF4G1	4070446	8585	0.009	-0.1715	No
75	IPO7	2190746	8681	0.008	-0.1765	No
76	SEPT3	3830022 5290079	8771	0.006	-0.1813	No
77	BMP6	2100128	8904	0.005	-0.1884	No
78	PITX3	3130162	9007	0.003	-0.1939	No
79	TEX12	1090110	9378	-0.002	-0.2139	No
80	AP1S2	780279 4280707	9455	-0.003	-0.2180	No
81	AKAP10	2630504 5910577	9553	-0.004	-0.2232	No
82	SLC38A5	540093	9607	-0.005	-0.2260	No
83	DNMT3A	4050068 4810717	9722	-0.006	-0.2321	No
84	HNRPM	450497 4540451	9761	-0.007	-0.2341	No
85	HOXC5	1580017	9850	-0.008	-0.2388	No
86	ADAM10	3780156	10357	-0.015	-0.2660	No
87	TOM1L2	4810465	10496	-0.018	-0.2733	No
88	NDUFS1	2650253	11020	-0.026	-0.3013	No
89	AKAP1	110148 1740735 2260019 7000563	11225	-0.029	-0.3120	No
90	PICALM	1940280	11250	-0.030	-0.3129	No
91	HOXD4	5900301	11319	-0.031	-0.3162	No
92	CPT1A	6350093	11365	-0.031	-0.3183	No
93	ASPSCR1	610167 3990739	11927	-0.042	-0.3481	No
94	AGRP	1990082	12016	-0.044	-0.3524	No
95	NPM1	4730427	12115	-0.046	-0.3571	No
96	HOXA3	3610632 6020358	12188	-0.048	-0.3604	No
97	FLRT1	4540348	12270	-0.050	-0.3642	No
98	TRIB1	2320435	12272	-0.050	-0.3636	No
99	SUMF1	730050	12365	-0.053	-0.3679	No
100	FOXD3	6550156	12382	-0.053	-0.3681	No
101	PRKCE	5700053	12458	-0.054	-0.3715	No
102	HOXA1	1190524 5420142	12476	-0.055	-0.3717	No
103	TCOF1	2680086	12519	-0.056	-0.3733	No
104	TCEAL1	870577	12651	-0.059	-0.3797	No
105	STMN4	2900091	12977	-0.069	-0.3964	No
106	NGFRAP1	6770195	13031	-0.071	-0.3984	No
107	CTBP2	430309 3710079	13665	-0.095	-0.4315	No
108	SLC16A1	50433	13695	-0.097	-0.4319	No
109	CUL5	450142	13798	-0.101	-0.4362	No
110	WEE1	3390070	13909	-0.107	-0.4408	No
111	NPTX1	3710736	13962	-0.111	-0.4422	No
112	GGN	1410528 4210082 5290170	14011	-0.113	-0.4434	No
113	HTATIP	5360739	14522	-0.149	-0.4692	No
114	PRKACA	2640731 4050048	14523	-0.149	-0.4673	No
115	BLOC1S1	130341 3940717	14668	-0.163	-0.4731	No
116	SLC23A2	6660722	14683	-0.164	-0.4718	No
117	PIAS4	6040113	14906	-0.187	-0.4815	No
118	SIRT1	1190731	15314	-0.239	-0.5005	No
119	CANX	4760402	15396	-0.252	-0.5018	No
120	EGR2	3800403	15676	-0.306	-0.5131	Yes
121	HMGN1	2650026	15712	-0.314	-0.5110	Yes
122	RAB3IL1	380685 5420176	15752	-0.323	-0.5091	Yes
123	POLR3E	380152	15825	-0.341	-0.5087	Yes
124	ARMCX3	3290309	15873	-0.349	-0.5069	Yes
125	GABARAP	1450286	15916	-0.360	-0.5047	Yes
126	EPC1	1570050 5290095 6900193	15993	-0.380	-0.5040	Yes
127	TNRC15	6760746	16000	-0.382	-0.4996	Yes
128	ACY1	2360279 6550161	16028	-0.389	-0.4962	Yes
129	NRAS	6900577	16043	-0.393	-0.4920	Yes
130	RAI14	770288 1660075	16156	-0.421	-0.4928	Yes
131	TCERG1	2350551 4540397 5220746	16250	-0.445	-0.4923	Yes
132	BRD2	1450300 5340484 6100605	16425	-0.502	-0.4954	Yes
133	BAX	3830008	16778	-0.628	-0.5066	Yes
134	MCOLN1	4480563	16835	-0.649	-0.5015	Yes
135	CLN3	780368	16896	-0.678	-0.4963	Yes
136	DCTN4	3390010 5550170	16989	-0.716	-0.4923	Yes
137	IGF2R	1570402	17052	-0.749	-0.4863	Yes
138	PRDX4	3800039	17076	-0.758	-0.4781	Yes
139	SLC20A1	6420014	17103	-0.769	-0.4698	Yes
140	ATP6V1C1	2690324 5220528	17305	-0.865	-0.4699	Yes
141	CD164	3830594	17441	-0.949	-0.4653	Yes
142	UTX	2900017 6770452	17446	-0.954	-0.4536	Yes
143	RORC	1740121	17461	-0.959	-0.4423	Yes
144	CBARA1	360471	17489	-0.973	-0.4316	Yes
145	CSRP2BP	4570717 5550333	17534	-0.996	-0.4215	Yes
146	GNAS	630441 1850373 4050152	17542	-0.997	-0.4094	Yes
147	NIT1	1230338 3940671	17552	-0.999	-0.3974	Yes
148	SLC38A2	1470242 3800026	17587	-1.006	-0.3866	Yes
149	SOCS2	4760692	17628	-1.024	-0.3760	Yes
150	GADD45G	2510142	17680	-1.058	-0.3655	Yes
151	DDX3X	2190020	17759	-1.115	-0.3558	Yes
152	ARF6	3520026	17773	-1.123	-0.3424	Yes
153	COMMD3	2510259	17788	-1.142	-0.3289	Yes
154	HTF9C	3190048 4120132	17852	-1.188	-0.3174	Yes
155	GNA13	4590102	17876	-1.205	-0.3036	Yes
156	ALDH6A1	1770746	17943	-1.249	-0.2915	Yes
157	STMN1	1990717	18068	-1.364	-0.2811	Yes
158	OSGEP	5700239	18158	-1.465	-0.2676	Yes
159	UBE4B	780008 3610154	18163	-1.473	-0.2494	Yes
160	ATIC	4010593 6380463	18292	-1.642	-0.2358	Yes
161	HSPE1	3170438	18307	-1.669	-0.2156	Yes
162	FKBP11	3170575	18313	-1.677	-0.1949	Yes
163	GPX1	4150093	18354	-1.759	-0.1750	Yes
164	HEXA	2630358	18420	-1.931	-0.1544	Yes
165	STX6	4850750 6770278	18434	-1.963	-0.1305	Yes
166	SNX8	3450315	18445	-2.000	-0.1060	Yes
167	DUSP1	6860121	18491	-2.179	-0.0811	Yes
168	NOL5A	5570139	18524	-2.285	-0.0543	Yes
169	PFDN2	4230156	18537	-2.348	-0.0255	Yes
170	PER1	3290315	18540	-2.373	0.0041	Yes