Details for gene set V$USF

Table: GSEA Results Summary

Dataset	Set_03_absentNotch_versus_wtNotch.phenotype_absentNotch_versus_wtNotch.cls #wtNotch_versus_absentNotch
Phenotype	phenotype_absentNotch_versus_wtNotch.cls#wtNotch_versus_absentNotch
Upregulated in class	absentNotch
GeneSet	V$USF_02
Enrichment Score (ES)	-0.5416256
Normalized Enrichment Score (NES)	-1.6395575
Nominal p-value	0.0
FDR q-value	0.13393341
FWER p-Value	0.267

Table: GSEA details [plain text format]
	PROBE	DESCRIPTION (from dataset)	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	CHD4	5420059 6130338 6380717	406	1.424	-0.0022	No
2	PTGES2	4210097	408	1.422	0.0175	No
3	SESN3	110687	582	1.234	0.0252	No
4	ZFYVE26	6860152	810	1.060	0.0276	No
5	OPRS1	6130128 6290717	845	1.032	0.0401	No
6	VPS16	430064 3390041 6860301	1113	0.893	0.0380	No
7	CCAR1	3190092	1344	0.777	0.0363	No
8	ATF4	730441 1740195	1813	0.593	0.0192	No
9	COQ4	1660551	1833	0.585	0.0263	No
10	PRPS1	6350129	2061	0.513	0.0211	No
11	NDUFA7	5900722	2220	0.467	0.0190	No
12	HIVEP1	3850632	2376	0.420	0.0164	No
13	GTF2H1	2570746 2650148	2403	0.412	0.0207	No
14	MRPL27	2060131	2609	0.363	0.0147	No
15	ARPP-19	5700025	2671	0.350	0.0162	No
16	BRDT	3940102	2703	0.342	0.0193	No
17	DHX35	1230440	2811	0.322	0.0180	No
18	UROD	2470494	2844	0.315	0.0206	No
19	STC2	4920601	2899	0.306	0.0219	No
20	DDIT3	780373	2986	0.290	0.0213	No
21	MAP4K1	4060692	3032	0.284	0.0228	No
22	GTF2A1	4120138 4920524 5390110 1230397	3090	0.274	0.0235	No
23	ISGF3G	3190131 7100142	3293	0.240	0.0159	No
24	ATP6V1A	6590242	3325	0.234	0.0175	No
25	DUSP7	2940309	3538	0.207	0.0088	No
26	HNRPA1	4670398 5050687	3753	0.184	-0.0002	No
27	ARMET	5130670	3816	0.178	-0.0011	No
28	NFX1	450504	3877	0.172	-0.0020	No
29	DUSP8	6650039	3886	0.171	-0.0000	No
30	FEN1	1770541	4018	0.160	-0.0049	No
31	RPS2	1340647	4019	0.160	-0.0027	No
32	EGLN2	540086	4060	0.156	-0.0027	No
33	SLC39A5	2900100 4610440	4134	0.149	-0.0046	No
34	TESK2	6520524	4155	0.147	-0.0036	No
35	TAF6L	1850056	4178	0.145	-0.0028	No
36	NEUROD1	3060619	4179	0.145	-0.0008	No
37	RFC1	1190673	4254	0.140	-0.0029	No
38	SOX10	6200538	4333	0.134	-0.0052	No
39	MDM1	510528 1780280 2680152 2690181 3060025 3120487 4210601 4540037 4610142 5290110 6400433 6480743	4445	0.127	-0.0095	No
40	RPS28	3830221	4490	0.124	-0.0102	No
41	HOXB7	4540706 4610358	4493	0.123	-0.0086	No
42	COPZ1	6940100	4494	0.123	-0.0068	No
43	SEMA3A	1780064	4591	0.117	-0.0104	No
44	NRIP3	1340372	4783	0.106	-0.0193	No
45	SUPV3L1	1170072	4861	0.102	-0.0221	No
46	STK16	1740154	5044	0.093	-0.0306	No
47	FGF14	2630390 3520075 6770048	5366	0.079	-0.0469	No
48	RNF128	1230300 5670273	5449	0.077	-0.0503	No
49	DVL2	6110162	5617	0.070	-0.0584	No
50	TAC1	7000195 380706	5645	0.069	-0.0589	No
51	CTNS	4480048	5670	0.068	-0.0593	No
52	HNRPH2	2630040 5720671	5769	0.065	-0.0637	No
53	SEC23IP	4540484 6200047	5779	0.064	-0.0633	No
54	BDNF	2940128 3520368	5794	0.064	-0.0632	No
55	SLC12A6	610278 1980035 5340671	5911	0.060	-0.0686	No
56	GLA	4610364	6348	0.049	-0.0916	No
57	IRS4	430341 1190450	6513	0.045	-0.0998	No
58	GZMK	1410148	6570	0.044	-0.1023	No
59	SLC1A7	1990181	6578	0.043	-0.1021	No
60	MAX	5220021	6589	0.043	-0.1020	No
61	OMG	6760066	6609	0.043	-0.1024	No
62	ELAVL3	2850014	6851	0.038	-0.1150	No
63	NCOA6	1780333 6450110	7120	0.033	-0.1290	No
64	PLS3	3290082	7121	0.033	-0.1286	No
65	VNN1	3940400	7565	0.025	-0.1523	No
66	CREB5	2320368	7776	0.021	-0.1634	No
67	C4A	360286 3830100 5220750 6420132	7795	0.021	-0.1640	No
68	HNRPD	4120021	7947	0.019	-0.1720	No
69	LAMA3	1190131 5290239	7956	0.019	-0.1721	No
70	UBE2B	4780497	8000	0.018	-0.1742	No
71	CALR	510446	8057	0.017	-0.1770	No
72	BTBD14B	3520601 4280162	8213	0.015	-0.1852	No
73	RHOQ	520161	8431	0.012	-0.1968	No
74	MAT2A	4070026 4730079 6020280	8500	0.010	-0.2004	No
75	PIK3R1	4730671	8630	0.008	-0.2073	No
76	ILF3	940722 3190647 6520110	8663	0.008	-0.2089	No
77	BMP6	2100128	8904	0.005	-0.2218	No
78	EIF3S10	1190079 3840176	8954	0.004	-0.2244	No
79	CARKL	6020068	9047	0.003	-0.2294	No
80	HOXD10	6100039	9137	0.002	-0.2342	No
81	HOXB5	2900538	9344	-0.001	-0.2454	No
82	AP1S2	780279 4280707	9455	-0.003	-0.2513	No
83	LRP5	2100397 3170484	9458	-0.003	-0.2513	No
84	PFKFB1	2370128	9496	-0.004	-0.2533	No
85	XPO1	540707	9544	-0.004	-0.2558	No
86	FZD6	360288	9549	-0.004	-0.2560	No
87	CAPN6	1740168	9594	-0.005	-0.2583	No
88	LIN28	6590672	9613	-0.005	-0.2592	No
89	DNMT3A	4050068 4810717	9722	-0.006	-0.2650	No
90	HOXC5	1580017	9850	-0.008	-0.2717	No
91	UBXD2	4280092	9944	-0.010	-0.2766	No
92	CBX5	3830072 6290167	10003	-0.010	-0.2796	No
93	SLC17A2	870593 2810035	10014	-0.011	-0.2800	No
94	PPARGC1A	4670040	10233	-0.014	-0.2917	No
95	MTHFD1	5900398 6520427	10432	-0.017	-0.3022	No
96	TOM1L2	4810465	10496	-0.018	-0.3053	No
97	CLCN5	4200390	10831	-0.023	-0.3231	No
98	HOXA11	6980133	10835	-0.023	-0.3230	No
99	FMR1	5050075	11131	-0.028	-0.3386	No
100	PICALM	1940280	11250	-0.030	-0.3446	No
101	CPT1A	6350093	11365	-0.031	-0.3503	No
102	POGK	5290315	11670	-0.037	-0.3663	No
103	LHFP	3440368	11702	-0.038	-0.3675	No
104	PIP5K1A	4560672	11935	-0.042	-0.3795	No
105	UMPS	2340541 4730438	12104	-0.046	-0.3879	No
106	NPM1	4730427	12115	-0.046	-0.3878	No
107	CRLF1	3520092	12216	-0.049	-0.3926	No
108	SUMF1	730050	12365	-0.053	-0.3999	No
109	FOXD3	6550156	12382	-0.053	-0.4000	No
110	TYR	5690139	12395	-0.053	-0.3999	No
111	VLDLR	870722 3060047 5340452 6550131	12484	-0.055	-0.4039	No
112	APLN	6620632	12565	-0.057	-0.4075	No
113	ZIC3	380020	12924	-0.068	-0.4260	No
114	ETV1	70735 2940603 5080463	13625	-0.094	-0.4626	No
115	TGFB2	4920292	13877	-0.105	-0.4748	No
116	NPTX1	3710736	13962	-0.111	-0.4778	No
117	GGN	1410528 4210082 5290170	14011	-0.113	-0.4788	No
118	SMCR8	730653	14117	-0.120	-0.4829	No
119	TOP3A	7000435	14254	-0.129	-0.4884	No
120	GNB2	2350053	14436	-0.142	-0.4963	No
121	SLC23A2	6660722	14683	-0.164	-0.5074	No
122	SSR1	5890100	14850	-0.180	-0.5139	No
123	RUNX1	3840711	14869	-0.183	-0.5123	No
124	LAMC2	450692 2680041 4200059 4670148	15015	-0.199	-0.5174	No
125	KCNE4	2470102	15170	-0.220	-0.5227	No
126	BLNK	70288 6590092	15184	-0.222	-0.5203	No
127	DNAJB5	2900215	15210	-0.226	-0.5185	No
128	SYNPO2L	5390719	15232	-0.228	-0.5165	No
129	SIRT1	1190731	15314	-0.239	-0.5176	No
130	CDKN2C	5050750 5130148	15580	-0.286	-0.5280	No
131	RAB3IL1	380685 5420176	15752	-0.323	-0.5328	No
132	GABARAP	1450286	15916	-0.360	-0.5366	Yes
133	EPC1	1570050 5290095 6900193	15993	-0.380	-0.5355	Yes
134	TNRC15	6760746	16000	-0.382	-0.5305	Yes
135	SLC31A2	1450577	16008	-0.384	-0.5255	Yes
136	UBE2L6	60048 1170687	16022	-0.388	-0.5208	Yes
137	SQSTM1	6550056	16068	-0.399	-0.5177	Yes
138	PPM1A	1170301 5900273	16115	-0.410	-0.5145	Yes
139	RAI14	770288 1660075	16156	-0.421	-0.5109	Yes
140	TOPORS	4060592	16243	-0.443	-0.5094	Yes
141	TCERG1	2350551 4540397 5220746	16250	-0.445	-0.5035	Yes
142	COMMD8	5890358	16277	-0.455	-0.4986	Yes
143	CYR61	1240408 5290026 4120452 6550008	16340	-0.480	-0.4953	Yes
144	TCF12	3610324 7000156	16359	-0.484	-0.4896	Yes
145	AATF	5220575	16436	-0.505	-0.4867	Yes
146	ASNA1	3830041	16495	-0.524	-0.4825	Yes
147	GPR65	3120551	16498	-0.525	-0.4754	Yes
148	EIF4E	1580403 70133 6380215	16676	-0.587	-0.4768	Yes
149	BAX	3830008	16778	-0.628	-0.4735	Yes
150	UBXD3	5050193	16804	-0.638	-0.4660	Yes
151	ATF7IP	2690176 6770021	16813	-0.642	-0.4576	Yes
152	CLN3	780368	16896	-0.678	-0.4526	Yes
153	DCTN4	3390010 5550170	16989	-0.716	-0.4476	Yes
154	RAB9A	1690279 3710671	17259	-0.845	-0.4505	Yes
155	ATP6V1C1	2690324 5220528	17305	-0.865	-0.4409	Yes
156	H2AFY	4730750	17353	-0.896	-0.4310	Yes
157	MCAM	5130270 6620577	17393	-0.917	-0.4204	Yes
158	CD164	3830594	17441	-0.949	-0.4098	Yes
159	TIMM8A	110279	17443	-0.952	-0.3966	Yes
160	NIT1	1230338 3940671	17552	-0.999	-0.3886	Yes
161	PTMA	5570148	17683	-1.061	-0.3809	Yes
162	DDX3X	2190020	17759	-1.115	-0.3695	Yes
163	COMMD3	2510259	17788	-1.142	-0.3552	Yes
164	PABPC1	2650180 2690253 6020632 1990270	17797	-1.149	-0.3397	Yes
165	ALDH6A1	1770746	17943	-1.249	-0.3302	Yes
166	AKAP12	1450739	18094	-1.383	-0.3191	Yes
167	UBE4B	780008 3610154	18163	-1.473	-0.3023	Yes
168	MTCH2	3780603 6620215	18248	-1.571	-0.2851	Yes
169	RHEBL1	2810576	18266	-1.591	-0.2639	Yes
170	UTP14A	6590048	18323	-1.694	-0.2434	Yes
171	GPX1	4150093	18354	-1.759	-0.2206	Yes
172	GRN	4050239	18380	-1.839	-0.1964	Yes
173	NUDC	4780025	18392	-1.882	-0.1709	Yes
174	SNX8	3450315	18445	-2.000	-0.1459	Yes
175	EIF4B	5390563 5270577	18473	-2.090	-0.1184	Yes
176	KBTBD2	2320014	18488	-2.165	-0.0891	Yes
177	DUSP1	6860121	18491	-2.179	-0.0589	Yes
178	PFDN2	4230156	18537	-2.348	-0.0287	Yes
179	PER1	3290315	18540	-2.373	0.0041	Yes