Details for gene set V$PAX6

Table: GSEA Results Summary

Dataset	Set_03_absentNotch_versus_wtNotch.phenotype_absentNotch_versus_wtNotch.cls #wtNotch_versus_absentNotch
Phenotype	phenotype_absentNotch_versus_wtNotch.cls#wtNotch_versus_absentNotch
Upregulated in class	wtNotch
GeneSet	V$PAX6_01
Enrichment Score (ES)	0.44260725
Normalized Enrichment Score (NES)	1.1920326
Nominal p-value	0.16222222
FDR q-value	1.0
FWER p-Value	1.0

Table: GSEA details [plain text format]
	PROBE	DESCRIPTION (from dataset)	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	POU2AF1	5690242	1	4.937	0.1807	Yes
2	RTN4RL1	2630368	44	2.549	0.2718	Yes
3	HMGA1	6580408	293	1.609	0.3174	Yes
4	PDCD10	4760500	330	1.549	0.3722	Yes
5	SLC26A6	4810575	573	1.242	0.4046	Yes
6	TAX1BP3	940706 6100687 6220176	662	1.168	0.4426	Yes
7	TRERF1	6370017 6940138	2232	0.462	0.3749	No
8	MAP2K5	2030440	2282	0.448	0.3887	No
9	YARS	70739	2304	0.441	0.4037	No
10	STOML2	1940487	2311	0.439	0.4195	No
11	SUMO1	1990364 2760338 6380195	2474	0.393	0.4252	No
12	UBE2N	520369 2900047	2888	0.307	0.4142	No
13	SNX26	6660215	3422	0.222	0.3935	No
14	TAF5	3450288 5890193 6860435	3640	0.195	0.3890	No
15	JARID2	6290538	3835	0.177	0.3850	No
16	SOSTDC1	6760017	3840	0.176	0.3912	No
17	XKRX	3800192	3875	0.172	0.3957	No
18	ERG	50154 1770739	3951	0.166	0.3977	No
19	JMJD1C	940575 2120025	3954	0.165	0.4037	No
20	GLRA1	610575	4241	0.140	0.3934	No
21	CHRDL1	1580037 6380204	4833	0.104	0.3653	No
22	CNTFR	4480092 6200064	5242	0.085	0.3464	No
23	TITF1	3390554 4540292	5862	0.062	0.3153	No
24	FIP1L1	4590538 6510333	6198	0.053	0.2992	No
25	OTP	2630070	6425	0.047	0.2887	No
26	FLI1	3990142	7143	0.032	0.2513	No
27	FSTL5	770280	7280	0.030	0.2450	No
28	DKK2	3610433	7498	0.026	0.2343	No
29	TCF4	520021	7669	0.023	0.2260	No
30	SLC5A3	4280167	7733	0.022	0.2234	No
31	GPM6A	1660044 2750152	7864	0.020	0.2171	No
32	SP7	1050315	8101	0.017	0.2050	No
33	PHOX2B	5270075	8109	0.016	0.2052	No
34	SERPINI1	2940468	8919	0.004	0.1618	No
35	SDPR	3360292	9867	-0.008	0.1111	No
36	SLC6A5	870121	9930	-0.009	0.1081	No
37	TWIST1	5130619	10033	-0.011	0.1030	No
38	USP9X	130435 2370735 3120338	10040	-0.011	0.1030	No
39	RHOBTB3	4010687	10508	-0.018	0.0785	No
40	BHLHB5	6510520	10616	-0.020	0.0735	No
41	NOX4	6040136	10946	-0.025	0.0566	No
42	TEAD1	2470551	11124	-0.027	0.0481	No
43	PTPN4	1410047	11637	-0.037	0.0218	No
44	CPA4	3610100	12000	-0.044	0.0039	No
45	DMD	1740041 3990332	12741	-0.062	-0.0337	No
46	MBNL1	2640762 7100048	13161	-0.075	-0.0535	No
47	KIF12	4590014	13298	-0.080	-0.0579	No
48	GNAZ	6130296	13586	-0.092	-0.0700	No
49	ETV1	70735 2940603 5080463	13625	-0.094	-0.0686	No
50	DSCAM	1780050 2450731 2810438	13725	-0.098	-0.0704	No
51	SRPK2	6380341	13729	-0.098	-0.0669	No
52	RORB	6400035	13753	-0.099	-0.0645	No
53	RRAGA	6400603	14371	-0.138	-0.0928	No
54	SOX4	2260091	14749	-0.169	-0.1069	No
55	PDGFRA	2940332	14994	-0.197	-0.1128	No
56	JPH1	610739	15320	-0.240	-0.1216	No
57	RRM1	4150433	16003	-0.383	-0.1443	No
58	OVOL1	1690131	16101	-0.406	-0.1346	No
59	KCNN3	6520600 6420138	16792	-0.634	-0.1486	No
60	LMNA	520471 1500075 3190167 4210020	17007	-0.724	-0.1336	No
61	HNRPA0	2680048	17077	-0.758	-0.1096	No
62	H2AFZ	1470168	17329	-0.879	-0.0909	No
63	SH2D1A	4760025	18046	-1.338	-0.0805	No
64	SERTAD4	130593	18075	-1.373	-0.0318	No
65	NFYB	1850053	18303	-1.663	0.0169	No