Details for gene set V$NERF

Table: GSEA Results Summary

Dataset	Set_03_absentNotch_versus_wtNotch.phenotype_absentNotch_versus_wtNotch.cls #wtNotch_versus_absentNotch
Phenotype	phenotype_absentNotch_versus_wtNotch.cls#wtNotch_versus_absentNotch
Upregulated in class	wtNotch
GeneSet	V$NERF_Q2
Enrichment Score (ES)	0.41497055
Normalized Enrichment Score (NES)	1.2872821
Nominal p-value	0.03217822
FDR q-value	1.0
FWER p-Value	1.0

Table: GSEA details [plain text format]
	PROBE	DESCRIPTION (from dataset)	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	RASAL1	3710112	57	2.379	0.0246	Yes
2	SH2D2A	2970594	126	2.034	0.0446	Yes
3	ZFPM1	6760093	137	2.005	0.0674	Yes
4	FBXO36	1410086	156	1.921	0.0888	Yes
5	UBE2L3	1690707 5900242	222	1.745	0.1056	Yes
6	FGR	3780047	265	1.662	0.1227	Yes
7	HMGA1	6580408	293	1.609	0.1400	Yes
8	DEF6	840593	324	1.555	0.1565	Yes
9	CREB3	5220408	428	1.396	0.1672	Yes
10	FBS1	2570520	547	1.269	0.1756	Yes
11	PPP1R9B	3130619	585	1.227	0.1878	Yes
12	TPP2	3850093	631	1.190	0.1993	Yes
13	HMGN2	3140091	762	1.096	0.2050	Yes
14	JUNB	4230048	795	1.073	0.2158	Yes
15	POLD4	2320082	850	1.024	0.2248	Yes
16	BAZ2A	730184	852	1.024	0.2366	Yes
17	RASA1	1240315	869	1.018	0.2476	Yes
18	HIC1	2650142	981	0.963	0.2528	Yes
19	HCLS1	7100309	1017	0.939	0.2619	Yes
20	RPS6KA4	2190524	1028	0.934	0.2722	Yes
21	SRPR	6590647 6370114	1074	0.917	0.2804	Yes
22	STAT5A	2680458	1078	0.913	0.2909	Yes
23	LANCL1	1770079 6420670	1108	0.896	0.2998	Yes
24	PTPN6	4230128	1132	0.885	0.3088	Yes
25	CORO1A	3140609 3190020 3190037	1148	0.875	0.3182	Yes
26	ITPR3	4010632	1153	0.873	0.3282	Yes
27	MAPK3	580161 4780035	1279	0.803	0.3307	Yes
28	TMEM4	6220091	1301	0.793	0.3388	Yes
29	ZHX2	2900452	1580	0.680	0.3317	Yes
30	CAMK1D	1660100 2350309	1609	0.667	0.3380	Yes
31	MCTS1	6130133	1614	0.666	0.3455	Yes
32	TGIF2	3840364 4050520	1638	0.655	0.3519	Yes
33	TRAPPC3	2030176 6020609 6590373 6760019	1687	0.633	0.3566	Yes
34	ATP1A1	5670451	1711	0.623	0.3626	Yes
35	TFRC	4050551	1727	0.618	0.3690	Yes
36	USP5	4850017	1734	0.616	0.3759	Yes
37	SLC4A2	2690114	1773	0.604	0.3809	Yes
38	RGS3	60670 540736 1340180 1500369 3390735 4010131 4610402 6380114	1782	0.602	0.3874	Yes
39	PIK3CG	5890110	1823	0.589	0.3921	Yes
40	AGPAT1	610056	1942	0.551	0.3922	Yes
41	LAT	3170025	1959	0.545	0.3976	Yes
42	IKBKB	6840072	1993	0.532	0.4020	Yes
43	RANBP1	430215 1090180	2036	0.519	0.4058	Yes
44	TLN1	6590411	2043	0.517	0.4115	Yes
45	EBAG9	5090739 7330181	2181	0.477	0.4096	Yes
46	LYL1	2900242	2186	0.476	0.4150	Yes
47	GGTL3	1770288	2478	0.392	0.4038	No
48	ROM1	3130685	2513	0.383	0.4064	No
49	SNCG	3120725	2702	0.343	0.4002	No
50	ARHGDIB	4730433	2922	0.301	0.3918	No
51	DDIT3	780373	2986	0.290	0.3918	No
52	LYPLA2	1500112	3003	0.288	0.3943	No
53	MAP4K1	4060692	3032	0.284	0.3961	No
54	C1QTNF6	2030592	3126	0.267	0.3941	No
55	SPRED2	510138 540195	3150	0.261	0.3959	No
56	DPP3	2680725 3780670	3184	0.255	0.3971	No
57	NTRK3	4050687 4070167 4610026 6100484	3216	0.251	0.3984	No
58	SALL1	5420020 7050195	3563	0.205	0.3820	No
59	FLT1	3830167 4920438	3565	0.205	0.3843	No
60	PEX11B	6510152	3701	0.189	0.3792	No
61	PEX16	4560044	3728	0.186	0.3800	No
62	MID1	4070114 4760458	3739	0.185	0.3816	No
63	LRRFIP2	670575 730152 6590438	3850	0.175	0.3777	No
64	SEMA4C	1980315	3948	0.166	0.3743	No
65	ERG	50154 1770739	3951	0.166	0.3762	No
66	CLIC1	110600	4469	0.125	0.3496	No
67	NPY	3170138	4568	0.119	0.3457	No
68	RBBP7	430113 450450 2370309	4730	0.110	0.3382	No
69	MDFI	6200041	4760	0.108	0.3379	No
70	MPL	2360253	4837	0.103	0.3350	No
71	PIGW	4810072	4917	0.099	0.3318	No
72	CNNM1	2190433	5143	0.089	0.3207	No
73	HOXC4	1940193	5550	0.073	0.2995	No
74	BMP4	380113	5651	0.069	0.2949	No
75	EGR3	6940128	5654	0.069	0.2956	No
76	GMFB	6590035	5746	0.065	0.2914	No
77	ADAMTS4	430435	5816	0.063	0.2884	No
78	ROBO4	6040471 6650717	5902	0.061	0.2845	No
79	PITX2	870537 2690139	6007	0.058	0.2796	No
80	LYN	6040600	6066	0.056	0.2771	No
81	CAPZA1	3140390	6295	0.050	0.2653	No
82	PLCB2	360132	6384	0.048	0.2611	No
83	POU6F2	5270451	6769	0.040	0.2407	No
84	DOK1	1050279 2680112 5220273	7069	0.034	0.2249	No
85	OLFML2A	5890039	7123	0.033	0.2224	No
86	LSAMP	2810056 6550082	7158	0.032	0.2210	No
87	STAT5B	6200026	7297	0.029	0.2138	No
88	UBTF	4210450 6840403	7583	0.025	0.1987	No
89	ST7L	840735 2360576	8066	0.017	0.1727	No
90	FOSL1	430021	8666	0.008	0.1404	No
91	TENC1	1980403 7050575	8799	0.006	0.1333	No
92	RHOV	5860100	9211	0.001	0.1110	No
93	SDCCAG8	1780687	9273	-0.000	0.1077	No
94	NFIA	2760129 5860278	9392	-0.002	0.1013	No
95	GRM3	4540242	9402	-0.002	0.1009	No
96	POU4F3	2690035	9660	-0.005	0.0870	No
97	CPNE8	7040039	9735	-0.007	0.0831	No
98	ACTR3	1400497	9805	-0.007	0.0794	No
99	EFNA1	3840672	9824	-0.008	0.0785	No
100	FCER1G	5550020	10022	-0.011	0.0680	No
101	TWIST1	5130619	10033	-0.011	0.0676	No
102	NRXN3	1400546 3360471	10279	-0.014	0.0545	No
103	GOLGA7	6980121	10492	-0.018	0.0432	No
104	PAX6	1190025	10695	-0.021	0.0325	No
105	NLK	2030010 2450041	10808	-0.022	0.0267	No
106	TRO	1980113	10841	-0.023	0.0252	No
107	JAG1	3440390	10896	-0.024	0.0225	No
108	PTPRN	5900577	11371	-0.031	-0.0028	No
109	CHD2	4070039	11727	-0.038	-0.0216	No
110	CNTNAP1	6650132	11783	-0.040	-0.0241	No
111	ATOH8	4540204	11847	-0.041	-0.0270	No
112	LOXL3	4010168	12097	-0.046	-0.0400	No
113	ELK3	460377 1400762 3710497	12124	-0.046	-0.0409	No
114	SHC3	2690398	12407	-0.053	-0.0555	No
115	HOXB9	2640687	12435	-0.054	-0.0564	No
116	BTBD12	2940072	12661	-0.059	-0.0679	No
117	KLF13	4670563	12746	-0.062	-0.0717	No
118	STARD13	540722	12760	-0.063	-0.0717	No
119	MMRN2	1740047	12826	-0.065	-0.0745	No
120	BCOR	1660452 3940053	12970	-0.069	-0.0814	No
121	PAK3	4210136	13014	-0.071	-0.0829	No
122	TUSC3	1690411	13502	-0.089	-0.1083	No
123	KCND1	6860278	13521	-0.089	-0.1082	No
124	UCHL5	540139 1690053	13797	-0.101	-0.1219	No
125	ZNF23	1090537	13920	-0.108	-0.1273	No
126	CENTD2	60408 2510156 6100494	13988	-0.112	-0.1296	No
127	FXYD5	4060301 6590400	14218	-0.127	-0.1405	No
128	SH3TC1	3120162	14220	-0.127	-0.1391	No
129	CDK5	940348	14297	-0.133	-0.1417	No
130	FGFR2	4670601 5570402 6940377	14526	-0.150	-0.1523	No
131	UQCRH	4210463	14642	-0.161	-0.1567	No
132	PCDH7	450398 4150040	14882	-0.185	-0.1675	No
133	FURIN	4120168	15017	-0.199	-0.1724	No
134	SLITRK6	7320739	15142	-0.215	-0.1766	No
135	CD79A	3450563	15327	-0.242	-0.1838	No
136	RPS3	1570017 2370170	15834	-0.342	-0.2072	No
137	HYAL2	1500152	15921	-0.361	-0.2077	No
138	ATP5H	670438	16050	-0.394	-0.2100	No
139	CAP1	2650278	16144	-0.417	-0.2102	No
140	TOPORS	4060592	16243	-0.443	-0.2104	No
141	ARRB2	2060441	16245	-0.443	-0.2053	No
142	TCF12	3610324 7000156	16359	-0.484	-0.2058	No
143	CD79B	1450066 3390358	16503	-0.528	-0.2074	No
144	ITPKB	2900195 7100039	16516	-0.533	-0.2018	No
145	DPP8	3120136	16548	-0.545	-0.1971	No
146	FKBP10	1340706	16635	-0.572	-0.1951	No
147	MYOHD1	1410520	16882	-0.673	-0.2006	No
148	CDCA3	3940397	16976	-0.709	-0.1974	No
149	GPR132	4150114	17061	-0.752	-0.1932	No
150	MAP2K6	1230056 2940204	17105	-0.770	-0.1866	No
151	SLC30A7	2230463	17267	-0.848	-0.1854	No
152	CALM2	6620463	17272	-0.852	-0.1757	No
153	SECISBP2	6520309	17285	-0.856	-0.1664	No
154	STARD8	1780047	17407	-0.929	-0.1621	No
155	NDUFS2	4850020 6200402	17485	-0.970	-0.1550	No
156	DIABLO	2360170	17820	-1.164	-0.1595	No
157	HTF9C	3190048 4120132	17852	-1.188	-0.1474	No
158	FREQ	3140039 4060600 4560670	17980	-1.275	-0.1394	No
159	NFATC3	5050520	18034	-1.327	-0.1268	No
160	SLCO2B1	3450019	18045	-1.338	-0.1118	No
161	ELOVL5	3800170	18194	-1.511	-0.1022	No
162	EXTL2	5050433	18262	-1.585	-0.0874	No
163	LST1	5420372	18328	-1.714	-0.0709	No
164	VCL	4120487	18343	-1.734	-0.0515	No
165	ARHGAP8	380333 5390487	18372	-1.806	-0.0320	No
166	HN1	3360156	18382	-1.852	-0.0109	No
167	FCGR2B	780750	18452	-2.020	0.0089	No