Details for gene set V$E2F1DP2

Table: GSEA Results Summary

Dataset	Set_03_absentNotch_versus_wtNotch.phenotype_absentNotch_versus_wtNotch.cls #wtNotch_versus_absentNotch
Phenotype	phenotype_absentNotch_versus_wtNotch.cls#wtNotch_versus_absentNotch
Upregulated in class	absentNotch
GeneSet	V$E2F1DP2_01
Enrichment Score (ES)	-0.492247
Normalized Enrichment Score (NES)	-1.4920157
Nominal p-value	0.001754386
FDR q-value	0.16329655
FWER p-Value	0.918

Table: GSEA details [plain text format]
	PROBE	DESCRIPTION (from dataset)	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	MSH5	1340019 4730333	193	1.810	0.0120	No
2	HMGA1	6580408	293	1.609	0.0267	No
3	SUV39H1	630112	305	1.583	0.0457	No
4	RRM2	6350059 6940162	318	1.562	0.0645	No
5	PRPS2	3140707	387	1.459	0.0789	No
6	USP52	3710215 6380133	392	1.453	0.0967	No
7	TLE3	580040 4730121	549	1.268	0.1040	No
8	ATF5	5670685	587	1.226	0.1172	No
9	SFRS10	6130528 6400438 7040112	827	1.047	0.1173	No
10	DNMT1	2260097	1304	0.791	0.1013	No
11	FANCC	2060022	1373	0.766	0.1072	No
12	SYNGR4	6520450	1416	0.749	0.1142	No
13	POLD1	4830026	1667	0.641	0.1086	No
14	PHF5A	2690519	1760	0.607	0.1112	No
15	RANBP1	430215 1090180	2036	0.519	0.1027	No
16	PRPS1	6350129	2061	0.513	0.1078	No
17	RPS6KA5	2120563 7040546	2150	0.485	0.1091	No
18	HIST1H2BK	6130433	2192	0.474	0.1127	No
19	SFRS7	2760408	2235	0.461	0.1162	No
20	MAZ	3360121 6940750	2365	0.423	0.1144	No
21	HIST1H4A	1940600	2389	0.416	0.1184	No
22	POLR2A	5220647	2468	0.395	0.1190	No
23	SUMO1	1990364 2760338 6380195	2474	0.393	0.1237	No
24	RPS20	1740092	2527	0.381	0.1256	No
25	HCN3	3940438 6840750	2541	0.377	0.1295	No
26	FKBP5	2190048	2581	0.368	0.1320	No
27	TBX6	4730139 6840647	2683	0.346	0.1308	No
28	TRIM39	6550441	2951	0.297	0.1200	No
29	H2AFV	2030577 5220129	3051	0.280	0.1182	No
30	ARID4A	520156 1050707	3092	0.274	0.1194	No
31	SEMA6A	2690138 3060021	3366	0.230	0.1075	No
32	FHOD1	2680279	3605	0.199	0.0970	No
33	NCL	2360463 4540279	3682	0.191	0.0953	No
34	MXD3	6220014	3859	0.174	0.0879	No
35	GPRC5B	2760114	3924	0.168	0.0865	No
36	CORT	360008 2340092	4478	0.124	0.0581	No
37	ING3	110438 2060390	4523	0.121	0.0573	No
38	CDC6	4570296 5360600	4536	0.120	0.0581	No
39	CCNT1	2450563 5390184	4547	0.120	0.0591	No
40	HNRPR	2320440 2900601 4610008	5017	0.094	0.0348	No
41	HS6ST3	5910138	5144	0.089	0.0291	No
42	FBXO5	2630551	5159	0.088	0.0294	No
43	GMNN	2630148	5396	0.078	0.0176	No
44	PHF15	6550066 6860673	5863	0.062	-0.0068	No
45	TOPBP1	6020333	6541	0.044	-0.0430	No
46	NRK	4590609	6834	0.038	-0.0583	No
47	STK35	2360121	6835	0.038	-0.0578	No
48	GRIA4	2640131	6933	0.037	-0.0626	No
49	SLC9A7	5360301	7472	0.026	-0.0914	No
50	TYRO3	3130193	7525	0.026	-0.0939	No
51	HNRPD	4120021	7947	0.019	-0.1165	No
52	NELL2	2340725 4280301 5420008	8279	0.014	-0.1343	No
53	EPHB1	4610056	8294	0.014	-0.1348	No
54	KCNS2	2510093 6450672	8501	0.010	-0.1459	No
55	POLE2	6110041	8612	0.009	-0.1517	No
56	NR6A1	4010347	8616	0.009	-0.1518	No
57	ILF3	940722 3190647 6520110	8663	0.008	-0.1542	No
58	IPO7	2190746	8681	0.008	-0.1550	No
59	PLAGL1	3190082 6200193	8727	0.007	-0.1573	No
60	ZBTB4	6450441	9073	0.002	-0.1760	No
61	PEG3	3710020	9099	0.002	-0.1773	No
62	CASP8AP2	5910593	9128	0.002	-0.1788	No
63	MCM7	3290292 5220056	9312	-0.001	-0.1887	No
64	DNAJC9	6130019	9348	-0.001	-0.1906	No
65	ARHGAP6	2060121	9812	-0.008	-0.2156	No
66	MYH10	2640673	9871	-0.008	-0.2186	No
67	PODN	3710068	9972	-0.010	-0.2239	No
68	GABRB3	4150164	10569	-0.019	-0.2560	No
69	PAX6	1190025	10695	-0.021	-0.2625	No
70	ACBD6	4200446	10930	-0.024	-0.2748	No
71	MCM8	6130743	11125	-0.027	-0.2850	No
72	HOXC10	5360170	11438	-0.033	-0.3015	No
73	HNRPA2B1	1240619 6200161 6200494 6980408	11467	-0.033	-0.3026	No
74	YBX2	3520441	11472	-0.033	-0.3024	No
75	GLRA3	2570500	11491	-0.034	-0.3030	No
76	SLITRK4	5910022	11841	-0.041	-0.3214	No
77	POU4F1	2260315	11989	-0.043	-0.3288	No
78	RET	3850746	12013	-0.044	-0.3295	No
79	E2F7	4200056	12149	-0.047	-0.3362	No
80	ASXL2	130670	12176	-0.048	-0.3370	No
81	SP3	3840338	12229	-0.049	-0.3393	No
82	CLSPN	2190239 2630687 5550632	12305	-0.051	-0.3427	No
83	PRPF4B	940181 2570300	12694	-0.061	-0.3629	No
84	FMO4	360735	12707	-0.061	-0.3628	No
85	DMD	1740041 3990332	12741	-0.062	-0.3638	No
86	SMAD6	870504	13179	-0.076	-0.3866	No
87	PAQR4	730736	13188	-0.076	-0.3861	No
88	STAG1	1190300 1400722 4590100	13358	-0.083	-0.3942	No
89	PCSK1	2350148	13404	-0.085	-0.3956	No
90	MAP3K7	6040068	13743	-0.099	-0.4126	No
91	MAPT	360706 1230706	13772	-0.100	-0.4129	No
92	HNRPUL1	2120008 4920408 5570180 6370609 6770403	14128	-0.121	-0.4306	No
93	RQCD1	1850139	14282	-0.131	-0.4373	No
94	SNRPD1	4480162	14410	-0.140	-0.4424	No
95	FANCG	4010471	14462	-0.144	-0.4434	No
96	PRKDC	1400072 4230541	14641	-0.161	-0.4511	No
97	AP1S1	2030471 4570520 6900603	14727	-0.167	-0.4536	No
98	ADAMTS2	2650025 6370133 6840670	14747	-0.169	-0.4525	No
99	KCNA6	450291 1400086 1660291 2470576	14806	-0.174	-0.4535	No
100	SYNCRIP	1690195 3140113 4670279	14861	-0.182	-0.4541	No
101	E2F3	50162 460180	15049	-0.203	-0.4618	No
102	EED	2320373	15059	-0.204	-0.4597	No
103	GATA1	6400068	15089	-0.208	-0.4587	No
104	USP37	2470433	15128	-0.212	-0.4581	No
105	EFNA5	460707 2190519	15207	-0.225	-0.4596	No
106	MYC	380541 4670170	15358	-0.246	-0.4646	No
107	HIRA	4480609 5270167	15399	-0.252	-0.4637	No
108	EZH2	6130605 6380524	15457	-0.264	-0.4635	No
109	HIST1H2AH	3710333	15665	-0.303	-0.4709	No
110	ATAD2	870242 2260687	15795	-0.334	-0.4738	No
111	BRMS1L	6110609	15850	-0.345	-0.4724	No
112	MCM2	5050139	16009	-0.385	-0.4762	No
113	MCM6	60092 540181 6510110	16029	-0.390	-0.4724	No
114	NOLC1	2350195	16397	-0.494	-0.4861	Yes
115	MRPL40	2370215	16472	-0.515	-0.4837	Yes
116	AK2	4590458 4760195 6110097	16550	-0.545	-0.4811	Yes
117	MCM4	2760673 5420711	16712	-0.605	-0.4823	Yes
118	PIM1	630047	16761	-0.621	-0.4772	Yes
119	SLCO3A1	1050408 2370156 6110072	16768	-0.624	-0.4698	Yes
120	UNG	3130110 6100364	16876	-0.670	-0.4673	Yes
121	MCM3	5570068	16965	-0.703	-0.4633	Yes
122	ACO2	4230600	17123	-0.778	-0.4622	Yes
123	MSH2	6180273	17144	-0.787	-0.4535	Yes
124	CDCA7	3060097	17155	-0.793	-0.4442	Yes
125	PCNA	940754	17203	-0.821	-0.4365	Yes
126	H2AFZ	1470168	17329	-0.879	-0.4324	Yes
127	POLE4	6860097	17428	-0.944	-0.4259	Yes
128	FANCD2	1850280 6840348	17580	-1.003	-0.4217	Yes
129	NUP62	1240128	17593	-1.009	-0.4098	Yes
130	CDC5L	3130446 3390025 6400204	17635	-1.028	-0.3992	Yes
131	BRPF1	3170139	17641	-1.030	-0.3867	Yes
132	PTMA	5570148	17683	-1.061	-0.3757	Yes
133	POLD3	6400278	17691	-1.066	-0.3629	Yes
134	RBL1	3130372	17703	-1.074	-0.3501	Yes
135	CDC25A	3800184	17772	-1.122	-0.3399	Yes
136	PHC1	520195	17845	-1.184	-0.3291	Yes
137	HTF9C	3190048 4120132	17852	-1.188	-0.3147	Yes
138	IL4I1	3190161	17853	-1.188	-0.2999	Yes
139	NASP	2260139 2940369 5130707	17862	-1.193	-0.2855	Yes
140	ALDH6A1	1770746	17943	-1.249	-0.2743	Yes
141	SFRS1	2360440	18010	-1.309	-0.2617	Yes
142	STMN1	1990717	18068	-1.364	-0.2478	Yes
143	ZCCHC8	2260332 2350487	18085	-1.377	-0.2316	Yes
144	EIF4A1	1990341 2810300	18104	-1.391	-0.2153	Yes
145	E2F1	5360093	18222	-1.543	-0.2025	Yes
146	CBX3	1780592 3940008	18249	-1.572	-0.1843	Yes
147	AP4M1	70609 3440128	18291	-1.638	-0.1662	Yes
148	GSPT1	5420050	18376	-1.825	-0.1481	Yes
149	UGCGL1	4230072	18385	-1.856	-0.1255	Yes
150	DCK	6900411	18435	-1.963	-0.1038	Yes
151	PPM1D	1690193	18460	-2.052	-0.0796	Yes
152	MAPK6	6760520	18478	-2.130	-0.0540	Yes
153	SOAT1	1190019	18490	-2.177	-0.0276	Yes
154	TMPO	4050494	18577	-2.767	0.0021	Yes