Details for gene set IDX_TSA_DN

Table: GSEA Results Summary

Dataset	Set_03_absentNotch_versus_wtNotch.phenotype_absentNotch_versus_wtNotch.cls #wtNotch_versus_absentNotch
Phenotype	phenotype_absentNotch_versus_wtNotch.cls#wtNotch_versus_absentNotch
Upregulated in class	absentNotch
GeneSet	IDX_TSA_DN_CLUSTER3
Enrichment Score (ES)	-0.6742536
Normalized Enrichment Score (NES)	-1.8429598
Nominal p-value	0.0
FDR q-value	0.01765573
FWER p-Value	0.041

Table: GSEA details [plain text format]
	PROBE	DESCRIPTION (from dataset)	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	GGTA1	1570292	1154	0.873	-0.0359	No
2	MAGED2	1170142	2398	0.413	-0.0905	No
3	PSCD3	730301	2818	0.321	-0.1034	No
4	CDKN2A	4670215 4760047	2893	0.307	-0.0982	No
5	CCT3	7100403	2901	0.305	-0.0894	No
6	LATS2	4480593 6020494	3885	0.171	-0.1372	No
7	SIRT2	630494	4010	0.161	-0.1391	No
8	CXCL12	580546 4150750 4570068	4549	0.120	-0.1645	No
9	DPP7	4230520	4566	0.119	-0.1618	No
10	MAOA	1410039 4610324	4631	0.115	-0.1618	No
11	TPM1	130673	4665	0.113	-0.1601	No
12	GAS2	1340082	5253	0.084	-0.1892	No
13	GPC4	5910408	6023	0.057	-0.2290	No
14	FZD2	6480154	6464	0.046	-0.2513	No
15	DOK1	1050279 2680112 5220273	7069	0.034	-0.2829	No
16	SFRP2	4850097	7468	0.026	-0.3035	No
17	PLA2G4A	6380364	7770	0.021	-0.3191	No
18	GSTT1	5290520	8075	0.017	-0.3350	No
19	GALK2	2360632	8147	0.016	-0.3383	No
20	ACVR2A	6110647	8573	0.009	-0.3610	No
21	GEM	5290082	8599	0.009	-0.3620	No
22	PTGS2	2510301 3170369	8847	0.005	-0.3752	No
23	SKAP2	6760500	8917	0.004	-0.3788	No
24	NDRG4	6510685	9170	0.001	-0.3923	No
25	DNM1	1660097 5340519	9488	-0.003	-0.4093	No
26	RECK	840079	9881	-0.009	-0.4302	No
27	F3	2940180	9901	-0.009	-0.4310	No
28	SNX6	6200086	10390	-0.016	-0.4568	No
29	PLEKHC1	2650066	10541	-0.018	-0.4643	No
30	RNF13	2370021	11506	-0.034	-0.5153	No
31	BCAR1	1340215	11859	-0.041	-0.5330	No
32	ANXA11	6370128	11917	-0.042	-0.5348	No
33	DDAH2	4480551	12058	-0.045	-0.5410	No
34	ROCK2	1780035 5720025	12459	-0.054	-0.5610	No
35	FADS1	5270537	12633	-0.059	-0.5685	No
36	STXBP3	780706	13148	-0.075	-0.5940	No
37	PRKCD	770592	13430	-0.086	-0.6066	No
38	PLAT	6860128	13534	-0.090	-0.6094	No
39	CNN2	2230433 5270446	14099	-0.119	-0.6362	No
40	KLF4	1850022 3830239 5570750	14723	-0.167	-0.6648	No
41	CSRP1	2810403	14832	-0.177	-0.6653	No
42	DDEF1	1170411 4070465	14957	-0.193	-0.6662	Yes
43	NME4	3140736 5900446	15072	-0.206	-0.6661	Yes
44	TPD52L1	4590711 5570575	15102	-0.210	-0.6614	Yes
45	CEBPD	3360176	15280	-0.234	-0.6638	Yes
46	PLK2	6450152	15429	-0.259	-0.6640	Yes
47	KIFAP3	3800524 4590082 6940075	15556	-0.282	-0.6624	Yes
48	CDKN2B	6020040	15576	-0.285	-0.6548	Yes
49	CSF1	3120400	15843	-0.344	-0.6588	Yes
50	RASA4	110296 4200114	15967	-0.373	-0.6542	Yes
51	CYR61	1240408 5290026 4120452 6550008	16340	-0.480	-0.6598	Yes
52	SLC8A1	3440717	16377	-0.489	-0.6470	Yes
53	CITED2	5670114 5130088	16426	-0.502	-0.6345	Yes
54	SPG20	3360202	16572	-0.553	-0.6257	Yes
55	RASSF5	3450193	17035	-0.739	-0.6283	Yes
56	PHLDA1	2450020	17284	-0.856	-0.6159	Yes
57	NEDD9	1740373 4230053	17372	-0.904	-0.5934	Yes
58	CNN3	6110020	17777	-1.131	-0.5811	Yes
59	THBS2	2850136	17795	-1.148	-0.5475	Yes
60	JUP	2510671	17914	-1.230	-0.5168	Yes
61	EPHX1	1740136	18004	-1.303	-0.4824	Yes
62	ARMCX2	2320167	18056	-1.353	-0.4444	Yes
63	AKAP12	1450739	18094	-1.383	-0.4047	Yes
64	SPP1	2470609	18182	-1.500	-0.3642	Yes
65	CDK4	540075 4540600	18370	-1.803	-0.3200	Yes
66	EXOC4	2470253	18389	-1.866	-0.2648	Yes
67	HEBP1	6100279	18402	-1.897	-0.2083	Yes
68	IFI30	730309 2940500	18457	-2.034	-0.1499	Yes
69	EIF4B	5390563 5270577	18473	-2.090	-0.0878	Yes
70	VCAM1	2900450	18602	-3.170	0.0008	Yes