Details for gene set V$SRF_Q5

Table: GSEA Results Summary

Dataset	Set_03_truncNotch_versus_wtNotch.phenotype_truncNotch_versus_wtNotch.cls #truncNotch_versus_wtNotch
Phenotype	phenotype_truncNotch_versus_wtNotch.cls#truncNotch_versus_wtNotch
Upregulated in class	truncNotch
GeneSet	V$SRF_Q5_01
Enrichment Score (ES)	0.45727745
Normalized Enrichment Score (NES)	1.327297
Nominal p-value	0.02097902
FDR q-value	1.0
FWER p-Value	1.0

Table: GSEA details [plain text format]
	PROBE	DESCRIPTION (from dataset)	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	MAPKAPK2	2850500	26	3.846	0.0403	Yes
2	FLNA	5390193	62	3.307	0.0742	Yes
3	PADI2	2940092 6420136	117	2.975	0.1036	Yes
4	ARPC4	2900056	199	2.722	0.1287	Yes
5	ASB2	4760168	220	2.652	0.1563	Yes
6	ARF6	3520026	355	2.362	0.1747	Yes
7	DUSP10	2850673 3360064	366	2.336	0.1994	Yes
8	MYL6	60563 6100152	538	2.094	0.2129	Yes
9	PDLIM7	4780136	624	1.999	0.2299	Yes
10	MUS81	6660184	652	1.968	0.2498	Yes
11	BLOC1S1	130341 3940717	665	1.953	0.2703	Yes
12	EGR1	4610347	670	1.942	0.2912	Yes
13	CNN2	2230433 5270446	706	1.904	0.3099	Yes
14	CSRP1	2810403	725	1.880	0.3293	Yes
15	GRK6	1500053	899	1.715	0.3385	Yes
16	CDC25B	6940102	1097	1.538	0.3445	Yes
17	UBE2H	1980142 2970079	1161	1.491	0.3572	Yes
18	SERTAD4	130593	1192	1.476	0.3716	Yes
19	EEF1B2	4850400 6130161	1198	1.472	0.3873	Yes
20	CKM	1450524	1381	1.346	0.3920	Yes
21	H2AFX	3520082	1412	1.332	0.4048	Yes
22	VASP	7050500	1695	1.147	0.4020	Yes
23	PFN1	6130132	1701	1.144	0.4141	Yes
24	MRPS21	2650008	1880	1.036	0.4157	Yes
25	TAZ	7100193	2030	0.983	0.4183	Yes
26	EMILIN2	70253	2295	0.857	0.4132	Yes
27	RUNDC1	2450037	2369	0.824	0.4182	Yes
28	RHOJ	6660176	2452	0.781	0.4222	Yes
29	TLE3	580040 4730121	2456	0.780	0.4305	Yes
30	ANXA6	2190014	2479	0.771	0.4377	Yes
31	FGFRL1	6370047	2547	0.745	0.4421	Yes
32	SGK	1400131 2480056	2647	0.698	0.4443	Yes
33	MYADM	4230132	2920	0.592	0.4360	Yes
34	CFL2	380239 6200368	3035	0.551	0.4358	Yes
35	SLC4A3	360603 4730239 6380347	3078	0.535	0.4393	Yes
36	JUNB	4230048	3164	0.504	0.4402	Yes
37	TPM2	520735 3870390	3306	0.461	0.4375	Yes
38	EGR3	6940128	3418	0.434	0.4362	Yes
39	ACTB	1660736 2030204 2060215 5050047	3426	0.433	0.4405	Yes
40	TAF5L	5690152	3438	0.430	0.4446	Yes
41	COL1A1	730020	3476	0.422	0.4472	Yes
42	NR2F1	4120528 360402	3643	0.386	0.4423	Yes
43	FOS	1850315	3645	0.386	0.4465	Yes
44	NPPA	6550328	3668	0.382	0.4494	Yes
45	ELAVL4	50735 3360086 5220167	3674	0.381	0.4533	Yes
46	DVL3	360156 5390075	3677	0.380	0.4573	Yes
47	FGF8	6350504	3853	0.346	0.4515	No
48	MAP1A	4920576	3945	0.329	0.4502	No
49	NRAS	6900577	4037	0.314	0.4486	No
50	MRGPRF	4780746	4364	0.264	0.4338	No
51	GGN	1410528 4210082 5290170	4466	0.249	0.4311	No
52	LRRTM4	5910100	4504	0.243	0.4317	No
53	SRF	70139 2320039	4578	0.235	0.4303	No
54	FOXE3	6900102	4598	0.234	0.4318	No
55	PLCB3	4670402	4661	0.227	0.4309	No
56	ACTG2	4780180	4745	0.217	0.4287	No
57	CITED2	5670114 5130088	4784	0.213	0.4290	No
58	PELI2	1940364	5239	0.170	0.4062	No
59	TGFB1I1	2060288 6550450	5331	0.163	0.4030	No
60	PCDH7	450398 4150040	5391	0.158	0.4015	No
61	PPAP2B	3190397 4730280	5410	0.156	0.4023	No
62	FOXP2	3520561 4150372 4760524	5437	0.155	0.4025	No
63	WNT3	2360685	5468	0.153	0.4026	No
64	STAT5B	6200026	5493	0.151	0.4029	No
65	ITGB1BP2	6200129	5536	0.148	0.4022	No
66	MYLK	4010600 7000364	5581	0.144	0.4014	No
67	SRD5A2	6840433	5634	0.141	0.4001	No
68	RSU1	4850372	5684	0.138	0.3989	No
69	COL23A1	2030358	5697	0.137	0.3998	No
70	DLL1	1770377	5744	0.134	0.3987	No
71	RIMS1	5670022	6239	0.107	0.3731	No
72	HOXB5	2900538	6359	0.101	0.3678	No
73	TADA3L	4210070 5720088 6660333	6380	0.100	0.3678	No
74	PPARG	1990168 2680603 6130632	6395	0.100	0.3681	No
75	ATF3	1940546	6450	0.097	0.3662	No
76	CA3	870687 5890390	6457	0.097	0.3669	No
77	CHST8	1940050	6596	0.091	0.3604	No
78	CASQ1	6290035 7000707	6627	0.090	0.3598	No
79	FLNC	2360048 5050270	6651	0.089	0.3595	No
80	PODN	3710068	6717	0.087	0.3569	No
81	CACNA1B	1740010 5360593	6726	0.086	0.3574	No
82	LRRFIP1	870259 1050204 2760377	6803	0.083	0.3542	No
83	RASSF2	2480079 5720546	6822	0.083	0.3541	No
84	PLN	3940132	6832	0.083	0.3545	No
85	MLLT7	4480707	7021	0.076	0.3452	No
86	RAI2	6770333	7132	0.072	0.3400	No
87	CALD1	1770129 1940397	7213	0.070	0.3364	No
88	ABR	610079 1170609 3610195 5670050	7285	0.068	0.3333	No
89	TANK	1090020 2060458 2370400	7540	0.061	0.3202	No
90	DSTN	3140592	7545	0.061	0.3206	No
91	IER2	2030008	7641	0.058	0.3161	No
92	HOXC5	1580017	7717	0.056	0.3126	No
93	BNC2	4810603	7719	0.056	0.3132	No
94	NPAS2	770670	7791	0.054	0.3099	No
95	CNN1	510707	7875	0.052	0.3060	No
96	CALN1	3610722	7896	0.052	0.3055	No
97	KCNA1	2030594	7898	0.052	0.3060	No
98	NKX2-2	4150731	7960	0.050	0.3032	No
99	CXCL5	6370333	7983	0.050	0.3026	No
100	LPP	1660541	8155	0.046	0.2938	No
101	NRXN3	1400546 3360471	8373	0.041	0.2825	No
102	HOXC4	1940193	8546	0.038	0.2735	No
103	ABCA1	6290156	8659	0.035	0.2678	No
104	ASPA	3290400	9038	0.028	0.2477	No
105	TRDN	1580411	9195	0.025	0.2395	No
106	ACTA1	840538	9331	0.023	0.2324	No
107	NFATC4	2470735	9458	0.021	0.2258	No
108	MYO1E	3140504	9494	0.020	0.2241	No
109	DIXDC1	6980435	10047	0.011	0.1943	No
110	TAGLN	6660280	10085	0.010	0.1924	No
111	MYL9	4210750 7050138	10173	0.009	0.1878	No
112	HOXD10	6100039	10374	0.006	0.1770	No
113	MYH11	7100273	10648	0.001	0.1622	No
114	KCNK3	2690372	11147	-0.007	0.1353	No
115	IL17B	6940711	11182	-0.008	0.1335	No
116	SLC2A4	540441	11569	-0.014	0.1128	No
117	FGF7	5390484	11593	-0.015	0.1117	No
118	CRH	3710301	11643	-0.016	0.1092	No
119	NPR3	1580239	11950	-0.021	0.0928	No
120	MITF	380056	12042	-0.024	0.0881	No
121	THRAP1	2470121	12182	-0.027	0.0809	No
122	ADAMTSL1	2970092	12428	-0.032	0.0680	No
123	RARB	430139 1410138	12614	-0.037	0.0583	No
124	PRKAB2	6980300	12629	-0.037	0.0580	No
125	ACTR3	1400497	12632	-0.037	0.0583	No
126	ITGB6	2810068 4570332	12671	-0.038	0.0566	No
127	THBS1	4560494 430288	12677	-0.039	0.0568	No
128	STARD13	540722	12837	-0.043	0.0486	No
129	NR2F2	3170609 3310577	12988	-0.048	0.0410	No
130	FOSB	1940142	13018	-0.049	0.0400	No
131	TRIM46	3520609 4590010	13084	-0.051	0.0370	No
132	GPR20	6620601	13118	-0.052	0.0358	No
133	SDPR	3360292	13176	-0.055	0.0333	No
134	TNMD	3060520	13303	-0.060	0.0271	No
135	EGR2	3800403	13438	-0.065	0.0205	No
136	EFHD1	4070358	13449	-0.065	0.0207	No
137	OTX1	2510215	13778	-0.081	0.0038	No
138	FGF17	3130022	14165	-0.106	-0.0160	No
139	RERE	3940279	14292	-0.117	-0.0216	No
140	MID1	4070114 4760458	14377	-0.124	-0.0248	No
141	TRIM3	5570156	14454	-0.130	-0.0275	No
142	CDKN1B	3800025 6450044	14572	-0.142	-0.0323	No
143	MAP2K6	1230056 2940204	14593	-0.145	-0.0318	No
144	ASXL2	130670	15015	-0.204	-0.0524	No
145	MYL7	2480541	15019	-0.205	-0.0504	No
146	PICALM	1940280	15187	-0.238	-0.0568	No
147	GADD45G	2510142	15193	-0.240	-0.0545	No
148	CORO1C	4570397	15368	-0.278	-0.0609	No
149	PHF12	870400 3130687	15491	-0.306	-0.0642	No
150	VCL	4120487	15804	-0.405	-0.0767	No
151	TIMP3	1450504 1980270	15927	-0.443	-0.0786	No
152	LCP1	4280397	16029	-0.475	-0.0789	No
153	CHD2	4070039	16070	-0.490	-0.0757	No
154	SLC16A6	1690156	16145	-0.516	-0.0742	No
155	PPP1R12A	4070066 4590162	16212	-0.543	-0.0719	No
156	KRTCAP2	5220040	16244	-0.553	-0.0675	No
157	SVIL	2450347 4050735 4070576 4120706 5390161 5860142 6520278 7100397	16281	-0.569	-0.0633	No
158	CSDA	2470092 3060053 4780056	16284	-0.572	-0.0572	No
159	FOXP1	6510433	16376	-0.605	-0.0556	No
160	ERBB2IP	580253 1090672	16411	-0.621	-0.0507	No
161	SLC25A4	2360519	16458	-0.642	-0.0463	No
162	DGKG	1770025	16462	-0.643	-0.0395	No
163	MBNL1	2640762 7100048	16585	-0.700	-0.0385	No
164	SCOC	610048 2230053	16671	-0.761	-0.0348	No
165	LDB1	5270601	16834	-0.855	-0.0343	No
166	EML4	5700373	16965	-0.941	-0.0312	No
167	CFL1	2340735	16966	-0.941	-0.0210	No
168	TPM3	670600 3170296 5670167 6650471	17068	-0.998	-0.0157	No
169	MAPK14	5290731	17315	-1.150	-0.0165	No
170	KCNH2	1170451	17472	-1.287	-0.0110	No
171	ATF4	730441 1740195	17764	-1.594	-0.0095	No
172	HOXB4	540131	17850	-1.681	0.0041	No
173	RBBP7	430113 450450 2370309	17868	-1.701	0.0216	No
174	H3F3A	2900086	17914	-1.745	0.0381	No