Details for gene set V$SRF

Table: GSEA Results Summary

Dataset	Set_03_truncNotch_versus_wtNotch.phenotype_truncNotch_versus_wtNotch.cls #truncNotch_versus_wtNotch
Phenotype	phenotype_truncNotch_versus_wtNotch.cls#truncNotch_versus_wtNotch
Upregulated in class	truncNotch
GeneSet	V$SRF_Q4
Enrichment Score (ES)	0.41942316
Normalized Enrichment Score (NES)	1.2298592
Nominal p-value	0.062228654
FDR q-value	1.0
FWER p-Value	1.0

Table: GSEA details [plain text format]
	PROBE	DESCRIPTION (from dataset)	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	MAPKAPK2	2850500	26	3.846	0.0425	Yes
2	FLNA	5390193	62	3.307	0.0783	Yes
3	PADI2	2940092 6420136	117	2.975	0.1093	Yes
4	ARPC4	2900056	199	2.722	0.1359	Yes
5	AGRP	1990082	438	2.207	0.1482	Yes
6	MYL6	60563 6100152	538	2.094	0.1667	Yes
7	MUS81	6660184	652	1.968	0.1830	Yes
8	BLOC1S1	130341 3940717	665	1.953	0.2047	Yes
9	EGR1	4610347	670	1.942	0.2266	Yes
10	CSRP1	2810403	725	1.880	0.2451	Yes
11	NPM3	3610300	865	1.742	0.2575	Yes
12	TPM1	130673	883	1.728	0.2762	Yes
13	GRK6	1500053	899	1.715	0.2950	Yes
14	SERTAD4	130593	1192	1.476	0.2960	Yes
15	EEF1B2	4850400 6130161	1198	1.472	0.3125	Yes
16	CKM	1450524	1381	1.346	0.3180	Yes
17	H2AFX	3520082	1412	1.332	0.3316	Yes
18	ESRRA	6550242	1522	1.257	0.3400	Yes
19	SLC35A2	6770156	1687	1.153	0.3442	Yes
20	VASP	7050500	1695	1.147	0.3569	Yes
21	PFN1	6130132	1701	1.144	0.3697	Yes
22	TAZ	7100193	2030	0.983	0.3631	Yes
23	EMILIN2	70253	2295	0.857	0.3586	Yes
24	RUNDC1	2450037	2369	0.824	0.3640	Yes
25	RHOJ	6660176	2452	0.781	0.3685	Yes
26	TLE3	580040 4730121	2456	0.780	0.3772	Yes
27	ANXA6	2190014	2479	0.771	0.3848	Yes
28	FGFRL1	6370047	2547	0.745	0.3897	Yes
29	SERPINH1	6130014	2555	0.742	0.3978	Yes
30	SGK	1400131 2480056	2647	0.698	0.4008	Yes
31	IHPK1	1340053	2727	0.661	0.4041	Yes
32	CFL2	380239 6200368	3035	0.551	0.3937	Yes
33	POU3F4	870274	3076	0.535	0.3977	Yes
34	SLC4A3	360603 4730239 6380347	3078	0.535	0.4037	Yes
35	JUNB	4230048	3164	0.504	0.4049	Yes
36	TPM2	520735 3870390	3306	0.461	0.4025	Yes
37	EGR3	6940128	3418	0.434	0.4014	Yes
38	ACTB	1660736 2030204 2060215 5050047	3426	0.433	0.4060	Yes
39	TAF5L	5690152	3438	0.430	0.4103	Yes
40	NR2F1	4120528 360402	3643	0.386	0.4036	Yes
41	FOS	1850315	3645	0.386	0.4080	Yes
42	NPPA	6550328	3668	0.382	0.4111	Yes
43	ELAVL4	50735 3360086 5220167	3674	0.381	0.4152	Yes
44	DVL3	360156 5390075	3677	0.380	0.4194	Yes
45	FGF8	6350504	3853	0.346	0.4139	No
46	MAP1A	4920576	3945	0.329	0.4127	No
47	DUSP6	5910286 7100070	3988	0.323	0.4141	No
48	CX3CL1	3990707	4299	0.272	0.4004	No
49	MRGPRF	4780746	4364	0.264	0.3999	No
50	LRRTM4	5910100	4504	0.243	0.3952	No
51	SRF	70139 2320039	4578	0.235	0.3939	No
52	FOXE3	6900102	4598	0.234	0.3955	No
53	PLCB3	4670402	4661	0.227	0.3948	No
54	ASPH	360722 1940039 2100066 2340121 2650113 2810064 2970008 3140040 3800750 4210014 4280133 4590035 4760433 6370671 6940338	4680	0.224	0.3963	No
55	ACTG2	4780180	4745	0.217	0.3953	No
56	CITED2	5670114 5130088	4784	0.213	0.3957	No
57	TGFB1I1	2060288 6550450	5331	0.163	0.3680	No
58	PPAP2B	3190397 4730280	5410	0.156	0.3655	No
59	FOXP2	3520561 4150372 4760524	5437	0.155	0.3659	No
60	STAT5B	6200026	5493	0.151	0.3646	No
61	JPH2	940041 5860026	5508	0.150	0.3656	No
62	ITGB1BP2	6200129	5536	0.148	0.3658	No
63	MYLK	4010600 7000364	5581	0.144	0.3651	No
64	SRD5A2	6840433	5634	0.141	0.3638	No
65	RSU1	4850372	5684	0.138	0.3628	No
66	COL23A1	2030358	5697	0.137	0.3637	No
67	CTGF	4540577	5729	0.135	0.3635	No
68	DLL1	1770377	5744	0.134	0.3643	No
69	HOXA3	3610632 6020358	5970	0.121	0.3535	No
70	DMD	1740041 3990332	6236	0.107	0.3403	No
71	RIMS1	5670022	6239	0.107	0.3415	No
72	HOXB5	2900538	6359	0.101	0.3362	No
73	TADA3L	4210070 5720088 6660333	6380	0.100	0.3362	No
74	PPARG	1990168 2680603 6130632	6395	0.100	0.3366	No
75	MYO1B	770372	6464	0.097	0.3340	No
76	TMOD1	3850100	6497	0.095	0.3334	No
77	PODN	3710068	6717	0.087	0.3225	No
78	CACNA1B	1740010 5360593	6726	0.086	0.3230	No
79	RASSF2	2480079 5720546	6822	0.083	0.3188	No
80	TNNC1	1990575	6971	0.077	0.3117	No
81	CALD1	1770129 1940397	7213	0.070	0.2994	No
82	ABR	610079 1170609 3610195 5670050	7285	0.068	0.2963	No
83	TANK	1090020 2060458 2370400	7540	0.061	0.2833	No
84	DSTN	3140592	7545	0.061	0.2837	No
85	IER2	2030008	7641	0.058	0.2793	No
86	HOXC5	1580017	7717	0.056	0.2758	No
87	BNC2	4810603	7719	0.056	0.2764	No
88	NPAS2	770670	7791	0.054	0.2732	No
89	NR4A1	6290161	7795	0.054	0.2736	No
90	CNN1	510707	7875	0.052	0.2700	No
91	CALN1	3610722	7896	0.052	0.2695	No
92	KCNA1	2030594	7898	0.052	0.2700	No
93	NKX2-2	4150731	7960	0.050	0.2673	No
94	LPP	1660541	8155	0.046	0.2573	No
95	ASPA	3290400	9038	0.028	0.2098	No
96	ACTA1	840538	9331	0.023	0.1942	No
97	EGR4	3120750	9432	0.021	0.1890	No
98	MYO1E	3140504	9494	0.020	0.1860	No
99	DIXDC1	6980435	10047	0.011	0.1562	No
100	TAGLN	6660280	10085	0.010	0.1543	No
101	GAB2	1410280 2340520 4280040	10087	0.010	0.1543	No
102	HOXA5	6840026	10171	0.009	0.1499	No
103	MYL9	4210750 7050138	10173	0.009	0.1500	No
104	KCNMB1	4760139	10310	0.006	0.1427	No
105	MSX1	2650309	10361	0.006	0.1400	No
106	RASD2	3360010	10371	0.006	0.1396	No
107	HOXD10	6100039	10374	0.006	0.1396	No
108	MYH11	7100273	10648	0.001	0.1248	No
109	KCNK3	2690372	11147	-0.007	0.0979	No
110	IL17B	6940711	11182	-0.008	0.0961	No
111	NLGN3	2650463	11241	-0.009	0.0931	No
112	FST	1110600	11433	-0.012	0.0829	No
113	NCOA6	1780333 6450110	11461	-0.012	0.0815	No
114	CRH	3710301	11643	-0.016	0.0719	No
115	SH3BGR	840400	11832	-0.019	0.0619	No
116	NPR3	1580239	11950	-0.021	0.0558	No
117	EDN1	1770047	12024	-0.023	0.0521	No
118	MYL1	2450707	12085	-0.025	0.0492	No
119	INSM1	3450671	12097	-0.025	0.0488	No
120	THRAP1	2470121	12182	-0.027	0.0446	No
121	ADAMTSL1	2970092	12428	-0.032	0.0317	No
122	RARB	430139 1410138	12614	-0.037	0.0221	No
123	THBS1	4560494 430288	12677	-0.039	0.0192	No
124	ATRX	2340039 3610132 4210373	12753	-0.041	0.0156	No
125	NR2F2	3170609 3310577	12988	-0.048	0.0034	No
126	FOSB	1940142	13018	-0.049	0.0024	No
127	TRIM46	3520609 4590010	13084	-0.051	-0.0005	No
128	GPR20	6620601	13118	-0.052	-0.0017	No
129	SDPR	3360292	13176	-0.055	-0.0042	No
130	TNMD	3060520	13303	-0.060	-0.0103	No
131	EGR2	3800403	13438	-0.065	-0.0169	No
132	EFHD1	4070358	13449	-0.065	-0.0167	No
133	FGF17	3130022	14165	-0.106	-0.0542	No
134	RERE	3940279	14292	-0.117	-0.0597	No
135	MID1	4070114 4760458	14377	-0.124	-0.0628	No
136	CDKN1B	3800025 6450044	14572	-0.142	-0.0717	No
137	MAP2K6	1230056 2940204	14593	-0.145	-0.0712	No
138	ROCK2	1780035 5720025	14976	-0.199	-0.0896	No
139	ARHGEF17	2060008	14984	-0.200	-0.0877	No
140	MYL7	2480541	15019	-0.205	-0.0872	No
141	SRP54	2970605	15127	-0.227	-0.0904	No
142	DUSP2	2370184	15174	-0.235	-0.0903	No
143	GADD45G	2510142	15193	-0.240	-0.0885	No
144	PHF12	870400 3130687	15491	-0.306	-0.1011	No
145	ELF4	4850193	15581	-0.330	-0.1022	No
146	VCL	4120487	15804	-0.405	-0.1096	No
147	STAG2	4540132	16056	-0.485	-0.1177	No
148	CHD2	4070039	16070	-0.490	-0.1128	No
149	PPP1R12A	4070066 4590162	16212	-0.543	-0.1142	No
150	KRTCAP2	5220040	16244	-0.553	-0.1096	No
151	SVIL	2450347 4050735 4070576 4120706 5390161 5860142 6520278 7100397	16281	-0.569	-0.1051	No
152	CSDA	2470092 3060053 4780056	16284	-0.572	-0.0987	No
153	FOXP1	6510433	16376	-0.605	-0.0967	No
154	SORT1	1850242 2320632 3870537	16382	-0.608	-0.0900	No
155	ERBB2IP	580253 1090672	16411	-0.621	-0.0845	No
156	SLC25A4	2360519	16458	-0.642	-0.0796	No
157	DGKG	1770025	16462	-0.643	-0.0725	No
158	MBNL1	2640762 7100048	16585	-0.700	-0.0711	No
159	SCOC	610048 2230053	16671	-0.761	-0.0670	No
160	TBL1X	6400524	16839	-0.858	-0.0663	No
161	EML4	5700373	16965	-0.941	-0.0623	No
162	CFL1	2340735	16966	-0.941	-0.0516	No
163	MMP14	670079	16996	-0.964	-0.0422	No
164	TPM3	670600 3170296 5670167 6650471	17068	-0.998	-0.0347	No
165	MAPK14	5290731	17315	-1.150	-0.0349	No
166	AKAP12	1450739	17716	-1.545	-0.0389	No
167	HOXB4	540131	17850	-1.681	-0.0270	No
168	RBBP7	430113 450450 2370309	17868	-1.701	-0.0085	No
169	MCL1	1660672	18610	-4.296	0.0003	No