DatasetSet_03_truncNotch_versus_wtNotch.phenotype_truncNotch_versus_wtNotch.cls
#truncNotch_versus_wtNotch
Phenotypephenotype_truncNotch_versus_wtNotch.cls#truncNotch_versus_wtNotch
Upregulated in classtruncNotch
GeneSetV$SRF_C
Enrichment Score (ES)0.43086147
Normalized Enrichment Score (NES)1.26069
Nominal p-value0.05124451
FDR q-value1.0
FWER p-Value1.0
Table: GSEA Results Summary



Fig 1: Enrichment plot: V$SRF_C   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

PROBEDESCRIPTION
(from dataset)
GENE SYMBOLGENE_TITLERANK IN GENE LISTRANK METRIC SCORERUNNING ESCORE ENRICHMENT
1FLNA5390193623.3070.0361Yes
2PADI22940092 64201361172.9750.0688Yes
3ARPC429000561992.7220.0969Yes
4ASB247601682202.6520.1275Yes
5PNKP4610685 57206053632.3460.1478Yes
6DUSP102850673 33600643662.3360.1756Yes
7MYL660563 61001525382.0940.1914Yes
8PDLIM747801366241.9990.2107Yes
9MUS8166601846521.9680.2327Yes
10EGR146103476701.9420.2550Yes
11CNN22230433 52704467061.9040.2758Yes
12GRK615000538991.7150.2859Yes
13KCTD15281073511161.5260.2925Yes
14CKM145052413811.3460.2942Yes
15DAPK3459012113861.3440.3101Yes
16FHL2140000816631.1650.3090Yes
17PFN1613013217011.1440.3207Yes
18CAP1265027817151.1360.3336Yes
19TUFT1540047 237001018601.0460.3383Yes
20RGS360670 540736 1340180 1500369 3390735 4010131 4610402 638011419601.0040.3449Yes
21TAZ710019320300.9830.3529Yes
22TOP1770471 4060632 665032420580.9680.3630Yes
23ARHGAP12810010 527006422420.8840.3637Yes
24EMILIN27025322950.8570.3711Yes
25RUNDC1245003723690.8240.3770Yes
26RHOJ666017624520.7810.3818Yes
27TLE3580040 473012124560.7800.3910Yes
28PDLIM4399035824780.7720.3991Yes
29ANXA6219001424790.7710.4083Yes
30FGFRL1637004725470.7450.4136Yes
31SIPA1522068726720.6870.4151Yes
32CYR611240408 5290026 4120452 655000827500.6500.4187Yes
33MRVI14810338 4850601 590044129740.5730.4134Yes
34CFL2380239 620036830350.5510.4168Yes
35POU3F487027430760.5350.4210Yes
36JUNB423004831640.5040.4223Yes
37MCAM5130270 662057734060.4370.4144Yes
38EGR3694012834180.4340.4190Yes
39ACTB1660736 2030204 2060215 505004734260.4330.4238Yes
40NR2F14120528 36040236430.3860.4167Yes
41FOS185031536450.3860.4213Yes
42ELAVL450735 3360086 522016736740.3810.4243Yes
43DVL3360156 539007536770.3800.4288Yes
44TITF13390554 454029238440.3460.4239Yes
45MATR31940170 534027838460.3460.4280Yes
46MAP1A492057639450.3290.4266Yes
47DUSP65910286 710007039880.3230.4282Yes
48COL1A238036440100.3190.4309Yes
49LRP52100397 317048441380.2950.4275No
50NKX6-22450332 312033343500.2660.4193No
51MRGPRF478074643640.2640.4217No
52GFPT2237012943700.2630.4246No
53LMCD11740484 219009743920.2600.4265No
54GGN1410528 4210082 529017044660.2490.4256No
55SRF70139 232003945780.2350.4224No
56FOXE3690010245980.2340.4241No
57ACVR1684067146520.2280.4240No
58PLCB3467040246610.2270.4263No
59ACTG2478018047450.2170.4243No
60MYO18B710067052660.1680.3982No
61SYNCRIP1690195 3140113 467027952780.1670.3996No
62TGFB1I12060288 655045053310.1630.3987No
63FOXP23520561 4150372 476052454370.1550.3949No
64STAT5B620002654930.1510.3937No
65JPH2940041 586002655080.1500.3947No
66ITGB1BP2620012955360.1480.3950No
67MYLK4010600 700036455810.1440.3944No
68SRD5A2684043356340.1410.3932No
69RSU1485037256840.1380.3922No
70DLL1177037757440.1340.3906No
71HOXA33610632 602035859700.1210.3799No
72DMD1740041 399033262360.1070.3668No
73HOXB5290053863590.1010.3614No
74TADA3L4210070 5720088 666033363800.1000.3615No
75CA3870687 589039064570.0970.3586No
76MYO1B77037264640.0970.3594No
77CACNA1B1740010 536059367260.0860.3463No
78RASSF22480079 572054668220.0830.3421No
79PLN394013268320.0830.3426No
80TNNC1199057569710.0770.3361No
81ITGA7123073971040.0730.3298No
82CALD11770129 194039772130.0700.3248No
83TANK1090020 2060458 237040075400.0610.3078No
84DSTN314059275450.0610.3084No
85SSH36290110 665049775670.0600.3079No
86IER2203000876410.0580.3047No
87NPAS277067077910.0540.2972No
88NR4A1629016177950.0540.2977No
89CNN151070778750.0520.2941No
90NKX2-2415073179600.0500.2901No
91LPP166054181550.0460.2802No
92MEIS1140057582230.0440.2771No
93FOSL143002189860.0290.2361No
94ASPA329040090380.0280.2337No
95ACTA184053893310.0230.2182No
96EGR4312075094320.0210.2130No
97MYO1E314050494940.0200.2099No
98SLC7A12450193 271024199250.0130.1868No
99DIXDC16980435100470.0110.1804No
100TAGLN6660280100850.0100.1785No
101HOXA56840026101710.0090.1740No
102MYL94210750 7050138101730.0090.1741No
103KCNMB14760139103100.0060.1668No
104RASD23360010103710.0060.1636No
105HOXD106100039103740.0060.1635No
106MYH117100273106480.0010.1488No
107KCNK3269037211147-0.0070.1219No
108IL17B694071111182-0.0080.1201No
109SLC2A454044111569-0.0140.0994No
110COL8A1459005011614-0.0150.0972No
111CRK1230162 478012811967-0.0220.0784No
112MITF38005612042-0.0240.0746No
113PRKAB2698030012629-0.0370.0433No
114ACTR3140049712632-0.0370.0437No
115ITGB62810068 457033212671-0.0380.0421No
116THBS14560494 43028812677-0.0390.0423No
117TCF2870338 505063212683-0.0390.0425No
118POPDC2203005612759-0.0410.0389No
119LIN28659067212802-0.0420.0371No
120STARD1354072212837-0.0430.0358No
121NR2F23170609 331057712988-0.0480.0282No
122FOSB194014213018-0.0490.0272No
123TRIM463520609 459001013084-0.0510.0243No
124GPR20662060113118-0.0520.0232No
125EGR2380040313438-0.0650.0067No
126EFHD1407035813449-0.0650.0069No
127AOC3684012913873-0.086-0.0150No
128ROCK21780035 572002514976-0.199-0.0723No
129MYL7248054115019-0.205-0.0721No
130SPAG7456052415138-0.229-0.0758No
131DUSP2237018415174-0.235-0.0749No
132GADD45G251014215193-0.240-0.0730No
133LTBP1780035 2100746 2760402 3780551 6550184 686019315445-0.293-0.0831No
134PHF12870400 313068715491-0.306-0.0819No
135VCL412048715804-0.405-0.0939No
136LCP1428039716029-0.475-0.1004No
137DNAJB4380195 2760372 394073516042-0.481-0.0953No
138USP523710215 638013316107-0.502-0.0928No
139PPP1R12A4070066 459016216212-0.543-0.0919No
140KRTCAP2522004016244-0.553-0.0870No
141FOXP1651043316376-0.605-0.0868No
142ERBB2IP580253 109067216411-0.621-0.0813No
143SLC25A4236051916458-0.642-0.0761No
144MBNL12640762 710004816585-0.700-0.0746No
145SCOC610048 223005316671-0.761-0.0701No
146ABL11050593 2030050 401011416718-0.789-0.0631No
147YWHAZ123071716788-0.828-0.0570No
148EML4570037316965-0.941-0.0553No
149CFL1234073516966-0.941-0.0440No
150CDC14A405013216977-0.950-0.0332No
151TPM3670600 3170296 5670167 665047117068-0.998-0.0262No
152MAPK14529073117315-1.150-0.0258No
153BCAS3405064717407-1.234-0.0159No
154AKAP12145073917716-1.545-0.0142No
155HOXB454013117850-1.681-0.0013No
156RBBP7430113 450450 237030917868-1.7010.0181No
157RRM1415043318035-1.8720.0315No
Table: GSEA details [plain text format]



Fig 2: V$SRF_C   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet



Fig 3: V$SRF_C: Random ES distribution   
Gene set null distribution of ES for V$SRF_C