Details for gene set SECRETORY

Table: GSEA Results Summary

Dataset	Set_03_truncNotch_versus_normalThy.phenotype_truncNotch_versus_normalThy.cls #truncNotch_versus_normalThy.phenotype_truncNotch_versus_normalThy.cls #truncNotch_versus_normalThy_repos
Phenotype	phenotype_truncNotch_versus_normalThy.cls#truncNotch_versus_normalThy_repos
Upregulated in class	normalThy
GeneSet	SECRETORY_PATHWAY
Enrichment Score (ES)	-0.60101813
Normalized Enrichment Score (NES)	-1.5561374
Nominal p-value	0.009638554
FDR q-value	0.5021423
FWER p-Value	0.991

Table: GSEA details [plain text format]
	PROBE	DESCRIPTION (from dataset)	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	RAB3A	3940288	694	3.735	0.0086	No
2	CCL8	3870010	824	3.396	0.0435	No
3	NAPA	1780537 5720102	1454	2.333	0.0384	No
4	SNAP23	2480722 5390315	2641	1.097	-0.0120	No
5	CCL3	2810092	2789	1.004	-0.0076	No
6	COPZ1	6940100	2849	0.981	0.0013	No
7	SCRN1	6040025 6580019	3193	0.759	-0.0078	No
8	SEPT5	460725	3275	0.710	-0.0034	No
9	COPE	2340088 2640450 6620279	3385	0.653	-0.0013	No
10	ERGIC3	1400075 4780047	3477	0.612	0.0014	No
11	NMUR2	1580717	4002	0.433	-0.0215	No
12	ARFGEF1	6760494	4046	0.420	-0.0187	No
13	AKAP3	5890471	4051	0.420	-0.0137	No
14	KIF1C	2480484	4324	0.347	-0.0241	No
15	VTI1B	3140364 6510497	5188	0.215	-0.0680	No
16	OPTN	3940041	5236	0.210	-0.0679	No
17	RIMS1	5670022	5867	0.147	-0.1001	No
18	AP3B2	4670605	6002	0.136	-0.1056	No
19	GRM4	6960092	6515	0.108	-0.1319	No
20	VAMP3	7100050	7172	0.078	-0.1663	No
21	LIN7A	4540707 5270369	8141	0.050	-0.2178	No
22	CADPS	2320181	9554	0.023	-0.2937	No
23	BET1	4010725	9932	0.016	-0.3138	No
24	COPB1	5390037	10505	0.007	-0.3445	No
25	EXOC5	7000711	10889	0.001	-0.3652	No
26	SEC22A	3800162 3840168 5220164 5290632	10932	-0.000	-0.3674	No
27	PKDREJ	4200088	11519	-0.010	-0.3989	No
28	STX16	70315	12084	-0.022	-0.4290	No
29	SYN3	3290427	12249	-0.026	-0.4376	No
30	NLGN1	5670278	12290	-0.027	-0.4394	No
31	TXNDC4	450537	12518	-0.033	-0.4512	No
32	CPLX1	2510735	12683	-0.037	-0.4596	No
33	SYT1	840364	12704	-0.038	-0.4602	No
34	CPLX2	6980538	12794	-0.040	-0.4645	No
35	NMUR1	1500403	13104	-0.052	-0.4805	No
36	CARTPT	6660687	13504	-0.071	-0.5012	No
37	COG2	5900129	13508	-0.071	-0.5005	No
38	SNCAIP	4010551	13549	-0.074	-0.5017	No
39	SEC22B	3190278	14046	-0.113	-0.5271	No
40	RPH3AL	70110	14504	-0.180	-0.5495	No
41	SYTL4	3060066	14955	-0.299	-0.5701	No
42	HRH3	6180040	15133	-0.356	-0.5752	No
43	LMAN1	3420068	15137	-0.358	-0.5710	No
44	SEC22C	1050600 6760050	15224	-0.392	-0.5708	No
45	RAB26	5910025	15369	-0.459	-0.5729	No
46	GOSR2	1850059 1980687 4590184	15683	-0.626	-0.5820	No
47	COG7	360133	15814	-0.695	-0.5805	No
48	ARFGEF2	5550500	16124	-0.913	-0.5859	No
49	STX18	4760706	16406	-1.094	-0.5875	Yes
50	SCAMP3	2360707	16574	-1.258	-0.5810	Yes
51	TXNDC1	520398	16588	-1.271	-0.5661	Yes
52	COPG2	2370152	16968	-1.700	-0.5656	Yes
53	SCAMP2	430114	17017	-1.744	-0.5466	Yes
54	COPB2	610154	17247	-2.026	-0.5340	Yes
55	KCNMB4	3290347	17272	-2.081	-0.5097	Yes
56	COG3	3840746	17531	-2.485	-0.4929	Yes
57	SNAP29	6380239	17572	-2.547	-0.4637	Yes
58	LMAN2L	50079 6590100 6650338	17664	-2.758	-0.4346	Yes
59	RAB14	6860139	17726	-2.872	-0.4025	Yes
60	GOSR1	730279	17810	-3.043	-0.3695	Yes
61	NRBP1	1740750	17879	-3.217	-0.3335	Yes
62	RAB2A	2450358	17896	-3.248	-0.2943	Yes
63	STX7	5910484	18365	-5.156	-0.2560	Yes
64	SCIN	5420180	18442	-5.806	-0.1885	Yes
65	ZW10	2900735 3520687	18583	-7.896	-0.0987	Yes
66	CCL5	3710397	18590	-8.151	0.0014	Yes