Details for gene set V$USF

Table: GSEA Results Summary

Dataset	Set_03_truncNotch_versus_normalThy.phenotype_truncNotch_versus_normalThy.cls #truncNotch_versus_normalThy.phenotype_truncNotch_versus_normalThy.cls #truncNotch_versus_normalThy_repos
Phenotype	phenotype_truncNotch_versus_normalThy.cls#truncNotch_versus_normalThy_repos
Upregulated in class	truncNotch
GeneSet	V$USF_C
Enrichment Score (ES)	0.46562725
Normalized Enrichment Score (NES)	1.2634202
Nominal p-value	0.03628447
FDR q-value	1.0
FWER p-Value	1.0

Table: GSEA details [plain text format]
	PROBE	DESCRIPTION (from dataset)	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	G6PC3	1580487 5390253	24	9.367	0.0350	Yes
2	ABCB6	6350138	55	8.001	0.0644	Yes
3	FBL	5130020	63	7.719	0.0940	Yes
4	RPS19	5860066	151	6.362	0.1140	Yes
5	PFDN2	4230156	196	5.888	0.1344	Yes
6	IPO4	5050619	199	5.881	0.1571	Yes
7	EXOSC5	3370671	258	5.520	0.1754	Yes
8	PA2G4	2030463	277	5.334	0.1951	Yes
9	EXOSC2	6900471	345	4.933	0.2106	Yes
10	NUDC	4780025	376	4.782	0.2275	Yes
11	ENO3	5270136	448	4.550	0.2413	Yes
12	HMOX1	1740687	484	4.425	0.2566	Yes
13	PSEN2	130382	575	4.117	0.2677	Yes
14	PPAT	1980019	630	3.927	0.2800	Yes
15	HSPE1	3170438	670	3.793	0.2926	Yes
16	TIMM10	610070 1450019	680	3.769	0.3067	Yes
17	SDC1	3440471 6350408	768	3.555	0.3158	Yes
18	ANXA6	2190014	882	3.265	0.3223	Yes
19	OPRS1	6130128 6290717	884	3.260	0.3349	Yes
20	HERPUD1	7100440	918	3.196	0.3455	Yes
21	EIF4B	5390563 5270577	1080	2.905	0.3481	Yes
22	HYAL2	1500152	1219	2.671	0.3509	Yes
23	PSMB3	4280594	1223	2.661	0.3611	Yes
24	RHEBL1	2810576	1310	2.521	0.3662	Yes
25	SLC39A7	5570131	1336	2.489	0.3745	Yes
26	SH3KBP1	670102 2850458 7000309	1392	2.405	0.3808	Yes
27	PER1	3290315	1425	2.364	0.3883	Yes
28	POLR2H	5890242	1455	2.332	0.3958	Yes
29	GPD1	2480095	1502	2.277	0.4021	Yes
30	LYAR	7000402	1568	2.177	0.4070	Yes
31	BCKDHA	50189	1670	2.054	0.4095	Yes
32	MYST3	5270500	1680	2.048	0.4170	Yes
33	HMGN2	3140091	1787	1.946	0.4187	Yes
34	PABPC4	1990170 6760270 5390138	1804	1.930	0.4254	Yes
35	EIF2C2	770451	1822	1.913	0.4319	Yes
36	ALDH3B1	4210010 6940403	1830	1.904	0.4389	Yes
37	FKBP11	3170575	1950	1.765	0.4393	Yes
38	RPL22	4070070	1952	1.764	0.4461	Yes
39	BHLHB2	7040603	1959	1.760	0.4526	Yes
40	POLR3E	380152	2025	1.692	0.4556	Yes
41	AKAP12	1450739	2060	1.646	0.4601	Yes
42	PABPC1	2650180 2690253 6020632 1990270	2199	1.494	0.4584	Yes
43	IPO13	3870088	2301	1.411	0.4584	Yes
44	SRP72	3990427	2307	1.408	0.4636	Yes
45	PAICS	610142	2378	1.343	0.4650	Yes
46	FARP1	5290102 7100341	2513	1.192	0.4624	Yes
47	AMPD2	630093 1170070	2538	1.171	0.4656	Yes
48	FHOD1	2680279	2670	1.072	0.4627	No
49	RUSC1	6450093 6980575	2778	1.008	0.4608	No
50	BCL9L	6940053	2991	0.892	0.4527	No
51	GRK6	1500053	2999	0.884	0.4558	No
52	TNFRSF21	6380100	3000	0.883	0.4592	No
53	ARF6	3520026	3174	0.768	0.4528	No
54	CACNA1D	1740315 4730731	3181	0.766	0.4555	No
55	UBE1	4150139 7050463	3393	0.649	0.4465	No
56	MYOHD1	1410520	3556	0.581	0.4400	No
57	CNNM1	2190433	3575	0.570	0.4412	No
58	LTBR	2450341	3582	0.566	0.4431	No
59	MPP3	1400056 4480411 6770168	3842	0.478	0.4309	No
60	NR1D1	2360471 770746 6590204	3902	0.461	0.4295	No
61	SYT3	6380017	4018	0.428	0.4249	No
62	SUCLG2	5340397 5700270	4053	0.419	0.4247	No
63	GTF2H1	2570746 2650148	4099	0.405	0.4238	No
64	UBXD3	5050193	4163	0.390	0.4219	No
65	AVP	2100113	4168	0.388	0.4232	No
66	SOCS5	3830398 7100093	4178	0.386	0.4242	No
67	TIMM9	2450484	4219	0.376	0.4235	No
68	ETV4	2450605	4317	0.349	0.4196	No
69	B4GALT2	780037	4344	0.344	0.4195	No
70	CTSF	6100021	4493	0.318	0.4127	No
71	MNT	4920575	4645	0.292	0.4057	No
72	RUNX2	1400193 4230215	4901	0.250	0.3928	No
73	HOXA3	3610632 6020358	4903	0.250	0.3937	No
74	HPCAL4	2600484	5319	0.201	0.3720	No
75	TBX4	3060008	5372	0.195	0.3699	No
76	TIAL1	4150048 6510605	5411	0.191	0.3686	No
77	SLC26A2	2360278	5452	0.186	0.3671	No
78	DNMT3A	4050068 4810717	5469	0.184	0.3670	No
79	NXPH1	3870546	5494	0.181	0.3664	No
80	BMP2K	60541 5570504	5709	0.162	0.3554	No
81	ETV1	70735 2940603 5080463	6155	0.127	0.3317	No
82	DNAJB9	460114	6522	0.107	0.3123	No
83	RPL13A	2680519 5700142	6606	0.103	0.3082	No
84	GRIN2A	6550538	6647	0.101	0.3064	No
85	SLC6A15	5290176 6040017	6835	0.093	0.2966	No
86	CGN	5890139 6370167 6400537	7054	0.083	0.2851	No
87	NLN	1450576 5870575	7070	0.083	0.2846	No
88	LAP3	2570064	7125	0.081	0.2820	No
89	HS3ST3A1	2230497	7314	0.074	0.2721	No
90	ARRDC3	4610390	7538	0.066	0.2603	No
91	ADAMTS17	6510739	7746	0.061	0.2493	No
92	TLL1	2680315	8094	0.052	0.2306	No
93	STMN1	1990717	8289	0.047	0.2203	No
94	POGK	5290315	8408	0.045	0.2141	No
95	DRD1	430025	8409	0.045	0.2142	No
96	FADS3	3120079	8679	0.039	0.1998	No
97	NKX2-3	1990736 6940088	8780	0.037	0.1945	No
98	COL2A1	460446 3940500	8808	0.036	0.1932	No
99	CHST11	6760546	8998	0.032	0.1831	No
100	SC5DL	6650390	9085	0.031	0.1785	No
101	SLC12A5	1980692	9505	0.024	0.1559	No
102	HPCA	6860010	9522	0.023	0.1551	No
103	MTHFD1	5900398 6520427	9708	0.020	0.1451	No
104	SYT6	2510280 3850128 4540064	9729	0.020	0.1441	No
105	FLT3	2640487	9848	0.018	0.1378	No
106	PAX6	1190025	9897	0.017	0.1352	No
107	GPRC5C	1580372	9901	0.017	0.1352	No
108	BMP4	380113	9938	0.016	0.1333	No
109	KIAA0427	1690435	10029	0.015	0.1284	No
110	ABCA1	6290156	10073	0.014	0.1262	No
111	ARX	6900504	10217	0.012	0.1184	No
112	CHRM1	4280619	10310	0.010	0.1135	No
113	PRKCE	5700053	10501	0.007	0.1032	No
114	HOXC12	5270411	10558	0.006	0.1002	No
115	FGF11	840292	10593	0.006	0.0984	No
116	LIN28	6590672	10871	0.001	0.0834	No
117	SATB2	2470181	10987	-0.001	0.0771	No
118	SGTB	460170	11308	-0.006	0.0598	No
119	EIF3S1	6130368 6770044	11332	-0.007	0.0586	No
120	FGF14	2630390 3520075 6770048	11418	-0.009	0.0540	No
121	HOXC13	4070722	11553	-0.011	0.0468	No
122	NPTX1	3710736	11852	-0.017	0.0307	No
123	NPM1	4730427	12091	-0.022	0.0178	No
124	LHX9	2350112	12245	-0.026	0.0096	No
125	PLA2G4A	6380364	12255	-0.026	0.0092	No
126	HHIP	6940438	12397	-0.030	0.0017	No
127	PIGW	4810072	12493	-0.032	-0.0033	No
128	SET	6650286	12672	-0.037	-0.0128	No
129	SCFD2	2480504	12701	-0.037	-0.0142	No
130	ELOVL4	5220333	13097	-0.051	-0.0355	No
131	ENPP6	110524 580563	13110	-0.052	-0.0359	No
132	MCM8	6130743	13120	-0.052	-0.0362	No
133	GTF2A1	4120138 4920524 5390110 1230397	13282	-0.059	-0.0447	No
134	SNCAIP	4010551	13549	-0.074	-0.0588	No
135	PPARGC1B	3290114	13778	-0.090	-0.0709	No
136	DAZL	4050082	13812	-0.092	-0.0723	No
137	TDRD1	4230301 6110750	13982	-0.107	-0.0811	No
138	SNX5	1570021 6860609	14144	-0.123	-0.0893	No
139	XRN2	130603 1230113 4230309	14174	-0.125	-0.0904	No
140	LRP8	3610746 5360035	14182	-0.127	-0.0903	No
141	GPX1	4150093	14283	-0.141	-0.0952	No
142	ADCY3	2350347 3440242	14451	-0.169	-0.1036	No
143	CDC14A	4050132	14577	-0.195	-0.1096	No
144	WEE1	3390070	14754	-0.240	-0.1182	No
145	EEF1E1	4540711	14838	-0.265	-0.1217	No
146	HOXA4	940152	15140	-0.359	-0.1366	No
147	IVNS1ABP	4760601 6520113	15287	-0.418	-0.1429	No
148	SEMA7A	2630239 5050593	15335	-0.437	-0.1438	No
149	DAZAP1	5890563	15338	-0.438	-0.1422	No
150	HSPA4	1050170 3450309	15448	-0.501	-0.1462	No
151	CAMK4	1690091	15590	-0.576	-0.1516	No
152	CENTB5	5690128	15600	-0.582	-0.1498	No
153	EIF4E	1580403 70133 6380215	15675	-0.622	-0.1514	No
154	SLC31A2	1450577	15701	-0.641	-0.1503	No
155	CRMP1	4810014	15915	-0.758	-0.1589	No
156	EIF5A	1500059 5290022 6370026	16008	-0.822	-0.1607	No
157	CNOT4	2320242 6760706	16037	-0.844	-0.1589	No
158	RPL19	5550592	16041	-0.846	-0.1558	No
159	TEF	1050050 3120397 4060487	16133	-0.917	-0.1572	No
160	CLCN2	1940021	16136	-0.919	-0.1537	No
161	PFN1	6130132	16156	-0.934	-0.1511	No
162	EIF4G1	4070446	16163	-0.938	-0.1478	No
163	EFNB1	2970433	16266	-0.995	-0.1495	No
164	USP2	1190292 1240253 4850035	16298	-1.004	-0.1473	No
165	SIRT1	1190731	16522	-1.209	-0.1547	No
166	HSPH1	1690017	16694	-1.368	-0.1587	No
167	MORF4L2	6450133	16753	-1.436	-0.1562	No
168	MXD4	4810113	16871	-1.587	-0.1564	No
169	MAX	5220021	16906	-1.643	-0.1519	No
170	PDK2	2690017	16927	-1.663	-0.1465	No
171	RXRB	1780040 5340438	16993	-1.723	-0.1434	No
172	MAT2A	4070026 4730079 6020280	17258	-2.048	-0.1498	No
173	PTMA	5570148	17343	-2.177	-0.1459	No
174	ACVR2B	1660546	17472	-2.377	-0.1436	No
175	GNA13	4590102	17741	-2.915	-0.1468	No
176	FCHSD2	5720092	17769	-2.962	-0.1368	No
177	H3F3A	2900086	17809	-3.042	-0.1271	No
178	SLC20A1	6420014	17874	-3.207	-0.1182	No
179	GABARAP	1450286	17962	-3.439	-0.1095	No
180	DIABLO	2360170	18000	-3.526	-0.0979	No
181	BCAS3	4050647	18111	-3.842	-0.0889	No
182	WBP2	3170128	18364	-5.139	-0.0827	No
183	PPP1R9B	3130619	18386	-5.338	-0.0631	No
184	BCL6	940100	18388	-5.346	-0.0424	No
185	HSPBAP1	4060022	18512	-6.429	-0.0241	No
186	RORC	1740121	18573	-7.664	0.0023	No