Details for gene set V$MYC

Table: GSEA Results Summary

Dataset	Set_03_truncNotch_versus_normalThy.phenotype_truncNotch_versus_normalThy.cls #truncNotch_versus_normalThy.phenotype_truncNotch_versus_normalThy.cls #truncNotch_versus_normalThy_repos
Phenotype	phenotype_truncNotch_versus_normalThy.cls#truncNotch_versus_normalThy_repos
Upregulated in class	truncNotch
GeneSet	V$MYC_Q2
Enrichment Score (ES)	0.46140367
Normalized Enrichment Score (NES)	1.2011337
Nominal p-value	0.11755486
FDR q-value	1.0
FWER p-Value	1.0

Table: GSEA details [plain text format]
	PROBE	DESCRIPTION (from dataset)	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	SHMT2	1850180 6040010	68	7.543	0.0447	Yes
2	TAGLN2	4560121	100	6.921	0.0874	Yes
3	ATAD3A	4050288	138	6.485	0.1270	Yes
4	PFDN2	4230156	196	5.888	0.1617	Yes
5	LDHA	2190594	263	5.481	0.1933	Yes
6	PA2G4	2030463	277	5.334	0.2268	Yes
7	COPS7A	3940458 7000022	299	5.204	0.2590	Yes
8	NUDC	4780025	376	4.782	0.2856	Yes
9	CFL1	2340735	427	4.620	0.3125	Yes
10	PSEN2	130382	575	4.117	0.3309	Yes
11	TIMM10	610070 1450019	680	3.769	0.3495	Yes
12	PPRC1	1740441	1073	2.918	0.3470	Yes
13	EIF4B	5390563 5270577	1080	2.905	0.3653	Yes
14	RHEBL1	2810576	1310	2.521	0.3691	Yes
15	ADK	380338 520180 5270524	1379	2.427	0.3810	Yes
16	GPD1	2480095	1502	2.277	0.3890	Yes
17	HNRPA1	4670398 5050687	1779	1.951	0.3866	Yes
18	HMGN2	3140091	1787	1.946	0.3987	Yes
19	PABPC4	1990170 6760270 5390138	1804	1.930	0.4102	Yes
20	ALDH3B1	4210010 6940403	1830	1.904	0.4211	Yes
21	FKBP11	3170575	1950	1.765	0.4259	Yes
22	RPL22	4070070	1952	1.764	0.4372	Yes
23	TAF6L	1850056	2037	1.678	0.4434	Yes
24	ILK	870601 4480180	2201	1.493	0.4442	Yes
25	IPO13	3870088	2301	1.411	0.4479	Yes
26	AMPD2	630093 1170070	2538	1.171	0.4426	Yes
27	PTPRF	1770528 3190044	2569	1.152	0.4484	Yes
28	KRTCAP2	5220040	2749	1.024	0.4453	Yes
29	RUSC1	6450093 6980575	2778	1.008	0.4502	Yes
30	ATP5F1	7000725	2904	0.946	0.4495	Yes
31	ATP6V0B	2810112	2957	0.914	0.4526	Yes
32	BCL9L	6940053	2991	0.892	0.4565	Yes
33	AK2	4590458 4760195 6110097	3006	0.878	0.4614	Yes
34	FABP3	6860452	3152	0.780	0.4586	No
35	RAB3IL1	380685 5420176	3297	0.702	0.4553	No
36	SCYL1	5050717	3408	0.641	0.4534	No
37	IL15RA	2570270 3190711 6100091 6100270	3558	0.580	0.4491	No
38	CNNM1	2190433	3575	0.570	0.4519	No
39	LTBR	2450341	3582	0.566	0.4552	No
40	EIF3S10	1190079 3840176	3899	0.462	0.4411	No
41	GTF2H1	2570746 2650148	4099	0.405	0.4329	No
42	EBNA1BP2	50369 1400433 6040019	4127	0.398	0.4340	No
43	UBXD3	5050193	4163	0.390	0.4346	No
44	B4GALT2	780037	4344	0.344	0.4271	No
45	NRAS	6900577	4377	0.338	0.4275	No
46	CTSF	6100021	4493	0.318	0.4234	No
47	B3GALT6	50195	4734	0.276	0.4122	No
48	TESK2	6520524	4751	0.273	0.4130	No
49	HPCAL4	2600484	5319	0.201	0.3837	No
50	OPRD1	4280138	5348	0.199	0.3834	No
51	TIAL1	4150048 6510605	5411	0.191	0.3813	No
52	ESRRA	6550242	5482	0.182	0.3787	No
53	RTN4RL2	6450609	6518	0.107	0.3234	No
54	AGMAT	6200154	6546	0.106	0.3227	No
55	SLC6A15	5290176 6040017	6835	0.093	0.3077	No
56	SFXN2	2650563 3140095 3830762 3870398	6882	0.091	0.3058	No
57	CGN	5890139 6370167 6400537	7054	0.083	0.2971	No
58	SLC16A1	50433	7095	0.082	0.2954	No
59	CHD4	5420059 6130338 6380717	7662	0.063	0.2652	No
60	NRIP3	1340372	7682	0.063	0.2646	No
61	CTBP2	430309 3710079	7921	0.056	0.2521	No
62	STMN1	1990717	8289	0.047	0.2326	No
63	SLC1A7	1990181	8339	0.046	0.2302	No
64	POGK	5290315	8408	0.045	0.2268	No
65	FADS3	3120079	8679	0.039	0.2125	No
66	NKX2-3	1990736 6940088	8780	0.037	0.2073	No
67	COL2A1	460446 3940500	8808	0.036	0.2061	No
68	BHLHB3	3450438	9084	0.031	0.1914	No
69	SC5DL	6650390	9085	0.031	0.1916	No
70	IPO7	2190746	9502	0.024	0.1693	No
71	HPCA	6860010	9522	0.023	0.1684	No
72	SYT6	2510280 3850128 4540064	9729	0.020	0.1574	No
73	PAX6	1190025	9897	0.017	0.1485	No
74	PITX3	3130162	10085	0.014	0.1385	No
75	CHRM1	4280619	10310	0.010	0.1264	No
76	RFX5	5420128	10454	0.008	0.1187	No
77	HOXC12	5270411	10558	0.006	0.1132	No
78	HNRPF	670138	10615	0.005	0.1102	No
79	NR0B2	2470692	10637	0.005	0.1091	No
80	ALX4	3870019	10815	0.002	0.0996	No
81	LIN28	6590672	10871	0.001	0.0966	No
82	B3GALT2	430136	11264	-0.006	0.0754	No
83	AP3M1	5340433	11517	-0.010	0.0619	No
84	HOXC13	4070722	11553	-0.011	0.0601	No
85	FOSL1	430021	11832	-0.017	0.0451	No
86	TFB2M	3830161 4670059 4760184	12242	-0.025	0.0232	No
87	LHX9	2350112	12245	-0.026	0.0232	No
88	PLA2G4A	6380364	12255	-0.026	0.0229	No
89	POU3F1	3710022	12376	-0.029	0.0166	No
90	APOA5	6130471	12497	-0.032	0.0103	No
91	TRIM46	3520609 4590010	12650	-0.036	0.0024	No
92	FOXD3	6550156	13166	-0.054	-0.0251	No
93	USP15	610592 3520504	13194	-0.055	-0.0262	No
94	TGFB2	4920292	13407	-0.065	-0.0373	No
95	CBX5	3830072 6290167	13658	-0.081	-0.0503	No
96	TDRD1	4230301 6110750	13982	-0.107	-0.0671	No
97	LMX1A	2810239 5690324	14132	-0.121	-0.0743	No
98	LRP8	3610746 5360035	14182	-0.127	-0.0762	No
99	CDC14A	4050132	14577	-0.195	-0.0962	No
100	WEE1	3390070	14754	-0.240	-0.1042	No
101	ZZZ3	780133 2320239 2640452 5080706 6550341	15034	-0.321	-0.1172	No
102	IVNS1ABP	4760601 6520113	15287	-0.418	-0.1282	No
103	COMMD3	2510259	15319	-0.432	-0.1271	No
104	CENTB5	5690128	15600	-0.582	-0.1385	No
105	ARL3	5690725	15933	-0.768	-0.1515	No
106	FXYD2	1400280 2350719 3520184 7040377	15990	-0.804	-0.1494	No
107	USP2	1190292 1240253 4850035	16298	-1.004	-0.1595	No
108	SIRT1	1190731	16522	-1.209	-0.1638	No
109	RRAGC	5910348	17390	-2.258	-0.1962	No
110	ATF7IP	2690176 6770021	17399	-2.275	-0.1821	No
111	PFKFB3	630706	17720	-2.857	-0.1810	No
112	FCHSD2	5720092	17769	-2.962	-0.1646	No
113	CSDA	2470092 3060053 4780056	17777	-2.973	-0.1459	No
114	H3F3A	2900086	17809	-3.042	-0.1281	No
115	TMEM24	5860039	18435	-5.725	-0.1252	No
116	NIT1	1230338 3940671	18499	-6.238	-0.0886	No
117	FXYD6	3870164	18550	-7.118	-0.0456	No
118	RORC	1740121	18573	-7.664	0.0023	No