Details for gene set HYPOXIA

Table: GSEA Results Summary

Dataset	Set_03_truncNotch_versus_normalThy.phenotype_truncNotch_versus_normalThy.cls #truncNotch_versus_normalThy.phenotype_truncNotch_versus_normalThy.cls #truncNotch_versus_normalThy_repos
Phenotype	phenotype_truncNotch_versus_normalThy.cls#truncNotch_versus_normalThy_repos
Upregulated in class	truncNotch
GeneSet	HYPOXIA_REVIEW
Enrichment Score (ES)	0.7133746
Normalized Enrichment Score (NES)	1.7496144
Nominal p-value	0.0
FDR q-value	0.0075049577
FWER p-Value	0.063

Table: GSEA details [plain text format]
	PROBE	DESCRIPTION (from dataset)	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	PKM2	6520403 70500	8	11.751	0.1136	Yes
2	ALDOA	6290672	14	10.281	0.2132	Yes
3	MIF	3710332	79	7.280	0.2804	Yes
4	PFKL	6200167	205	5.841	0.3304	Yes
5	LDHA	2190594	263	5.481	0.3805	Yes
6	APEX1	3190519	339	4.957	0.4246	Yes
7	HMOX1	1740687	484	4.425	0.4598	Yes
8	TGM2	5360452	729	3.659	0.4821	Yes
9	HK2	2640722	889	3.249	0.5051	Yes
10	ENO1	5340128	1000	3.040	0.5287	Yes
11	SLC2A3	1990377	1119	2.834	0.5498	Yes
12	CDKN1A	4050088 6400706	1374	2.431	0.5597	Yes
13	TFRC	4050551	1439	2.350	0.5791	Yes
14	COL5A1	2230050	1539	2.226	0.5954	Yes
15	SPP1	2470609	1662	2.060	0.6088	Yes
16	NFKB1	5420358	1663	2.059	0.6288	Yes
17	ADM	4810121	1672	2.052	0.6483	Yes
18	TGFB1	1940162	1704	2.021	0.6662	Yes
19	PGK1	1570494 630300	1768	1.961	0.6818	Yes
20	BHLHB2	7040603	1959	1.760	0.6887	Yes
21	PLAUR	5910280	1994	1.727	0.7036	Yes
22	CDKN1B	3800025 6450044	2238	1.469	0.7048	Yes
23	IGF2	6510020	2329	1.386	0.7134	Yes
24	TGFB3	1070041	2553	1.165	0.7127	No
25	TFF3	1580129	3083	0.829	0.6922	No
26	SLC2A1	2100609	3116	0.805	0.6983	No
27	VIM	20431	3211	0.749	0.7005	No
28	EPAS1	5290156	3587	0.565	0.6857	No
29	PGF	4810593	3740	0.512	0.6825	No
30	FLT1	3830167 4920438	5109	0.224	0.6109	No
31	HK1	4280402	5684	0.164	0.5816	No
32	STC1	360161	5963	0.138	0.5679	No
33	EPO	940180	6395	0.113	0.5458	No
34	GAPDH	110022 430039 6220161	6462	0.110	0.5433	No
35	CCL2	4760019	6477	0.109	0.5436	No
36	FGF3	4230685	6723	0.097	0.5313	No
37	CP	2570484	7137	0.080	0.5099	No
38	FOS	1850315	7375	0.071	0.4978	No
39	TEK	6350541	8598	0.040	0.4323	No
40	TH	2100056	8777	0.037	0.4230	No
41	ENPEP	130373	8844	0.035	0.4198	No
42	ANGPT2	1230458 5720706 6040605	8923	0.033	0.4159	No
43	PTGS2	2510301 3170369	9006	0.032	0.4118	No
44	MMP13	510471 3940097	9174	0.029	0.4031	No
45	EDN2	6760647	9268	0.028	0.3984	No
46	HIF1A	5670605	9785	0.019	0.3707	No
47	TAGLN	6660280	10268	0.011	0.3448	No
48	XRCC5	7100286	10318	0.010	0.3423	No
49	BNIP3	3140270	10326	0.010	0.3420	No
50	IGFBP1	5720435	10500	0.007	0.3328	No
51	IGFBP3	2370500	11032	-0.002	0.3041	No
52	HGF	3360593	11644	-0.013	0.2713	No
53	EDN1	1770047	12189	-0.025	0.2422	No
54	F3	2940180	12659	-0.036	0.2173	No
55	HDAC9	1990010 2260133	13042	-0.049	0.1972	No
56	TGFA	1570332	13197	-0.055	0.1894	No
57	IGFBP2	5220563	13396	-0.065	0.1794	No
58	IL6	380133	13465	-0.069	0.1764	No
59	L1CAM	4850021	13830	-0.093	0.1576	No
60	JUN	840170	13860	-0.095	0.1570	No
61	LRP8	3610746 5360035	14182	-0.127	0.1409	No
62	PRPS1	6350129	14534	-0.186	0.1238	No
63	PFKP	70138 6760040 1170278	15394	-0.474	0.0821	No
64	PDGFB	3060440 6370008	15405	-0.480	0.0862	No
65	P4HA1	2630692	15450	-0.502	0.0887	No
66	BNIP3L	1940347	15806	-0.692	0.0763	No
67	XRCC6	2850450 3870528	16034	-0.844	0.0722	No
68	DDIT3	780373	16858	-1.577	0.0432	No
69	SAT1	4570463	17006	-1.733	0.0521	No
70	CCNG2	3190095	18019	-3.572	0.0322	No