Details for gene set HSC_INTERMEDIATEPROGENITORS

Table: GSEA Results Summary

Dataset	Set_03_truncNotch_versus_normalThy.phenotype_truncNotch_versus_normalThy.cls #truncNotch_versus_normalThy.phenotype_truncNotch_versus_normalThy.cls #truncNotch_versus_normalThy_repos
Phenotype	phenotype_truncNotch_versus_normalThy.cls#truncNotch_versus_normalThy_repos
Upregulated in class	truncNotch
GeneSet	HSC_INTERMEDIATEPROGENITORS_SHARED
Enrichment Score (ES)	0.6592271
Normalized Enrichment Score (NES)	1.6574783
Nominal p-value	0.0
FDR q-value	0.038813833
FWER p-Value	0.532

Table: GSEA details [plain text format]
	PROBE	DESCRIPTION (from dataset)	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	SDC4	6370411	11	10.535	0.0609	Yes
2	ALDOA	6290672	14	10.281	0.1209	Yes
3	C12ORF10	4120324 5270113	92	7.107	0.1582	Yes
4	GTF3A	2340451	121	6.671	0.1957	Yes
5	MRPL12	3120112	149	6.380	0.2315	Yes
6	SDF2L1	4230446	188	5.942	0.2641	Yes
7	TBRG4	3610239 6370594	232	5.682	0.2950	Yes
8	NPC2	2350102	237	5.666	0.3279	Yes
9	PLAC8	2900019	270	5.399	0.3577	Yes
10	GALK1	840162	334	4.994	0.3834	Yes
11	APEX1	3190519	339	4.957	0.4122	Yes
12	CHCHD4	2680075	504	4.351	0.4287	Yes
13	ITGB4BP	1400541	510	4.316	0.4537	Yes
14	MAPRE2	1660435 5860403	724	3.672	0.4636	Yes
15	HES6	540411 6550504	736	3.640	0.4843	Yes
16	KLHDC4	870288 5900092	767	3.557	0.5034	Yes
17	MRPS25	610441 870128 1410368	956	3.121	0.5115	Yes
18	WDR34	6100215	1007	3.032	0.5265	Yes
19	DHX37	1400309	1238	2.639	0.5295	Yes
20	APIP	2480440 2810471	1264	2.597	0.5434	Yes
21	SSR2	5390180	1308	2.522	0.5558	Yes
22	THOC5	4570047	1388	2.412	0.5656	Yes
23	GMPPA	520450 3120497	1417	2.377	0.5780	Yes
24	MRPS35	2370603 4070551	1598	2.141	0.5807	Yes
25	DBI	1090706	1676	2.049	0.5886	Yes
26	EEF1B2	4850400 6130161	1697	2.029	0.5993	Yes
27	BID	4590592 6130008	1783	1.950	0.6061	Yes
28	ERCC8	1240300 6450372 6590180	1901	1.813	0.6104	Yes
29	POLR3E	380152	2025	1.692	0.6136	Yes
30	PTCD2	1230088 1400605 3170576 6200609	2198	1.495	0.6131	Yes
31	CTSZ	1500687 1690364	2218	1.482	0.6207	Yes
32	DDX52	2970411	2254	1.455	0.6273	Yes
33	TCN2	2810139	2376	1.344	0.6286	Yes
34	CPA3	610242 6380102	2408	1.304	0.6346	Yes
35	GPT2	1850463	2423	1.284	0.6413	Yes
36	GFM1	6220711	2493	1.210	0.6447	Yes
37	RSU1	4850372	2556	1.163	0.6481	Yes
38	SURF6	3060451	2591	1.139	0.6529	Yes
39	ATP6V1F	5420082	2605	1.131	0.6588	Yes
40	TEX2	1740504 2480102 3060494	2712	1.046	0.6592	Yes
41	PES1	2470427	2843	0.985	0.6580	No
42	COMMD10	3120451	2937	0.927	0.6584	No
43	LMAN2	430154	3079	0.830	0.6556	No
44	ATP6AP2	4010059 5080315 7100347 6660484	3251	0.722	0.6506	No
45	SIGLEC5	5690398	3253	0.721	0.6547	No
46	POLR3C	6940546	3411	0.640	0.6500	No
47	CEBPZ	2970053 2680068	5118	0.224	0.5592	No
48	CITED2	5670114 5130088	5122	0.223	0.5604	No
49	GPR180	5390711	5217	0.212	0.5565	No
50	AP3S2	2630411 5080053	5444	0.187	0.5454	No
51	CDADC1	3710201 4120064	6092	0.130	0.5113	No
52	MAPKAPK3	630520	6236	0.122	0.5043	No
53	DTX4	4120433	6270	0.120	0.5032	No
54	TNS3	6380242	6408	0.112	0.4964	No
55	NEBL	1850369 2480286	6821	0.093	0.4748	No
56	C5ORF14	3780050	7066	0.083	0.4621	No
57	MAOA	1410039 4610324	7141	0.080	0.4585	No
58	NAT12	1780092 4730370	7359	0.072	0.4473	No
59	GCNT3	6290239	7435	0.069	0.4436	No
60	PLAA	60706 6370369	7454	0.069	0.4430	No
61	RASSF4	510372 1660673 6290040	8432	0.044	0.3906	No
62	GYS1	540154	9912	0.017	0.3108	No
63	BET1	4010725	9932	0.016	0.3099	No
64	AS3MT	1570064 2350113	10438	0.008	0.2827	No
65	ELOVL3	6860050	11133	-0.004	0.2453	No
66	CUL5	450142	12053	-0.021	0.1958	No
67	TXNDC4	450537	12518	-0.033	0.1710	No
68	MDH1	6660358 6760731	12975	-0.046	0.1466	No
69	HDGF	5130114 5420066 6590152	13119	-0.052	0.1392	No
70	AHCY	4230605	13391	-0.065	0.1250	No
71	RPN1	1240113	14061	-0.114	0.0895	No
72	NIPSNAP3B	630672 3710091 4540288 4780576	14567	-0.193	0.0634	No
73	D4ST1	1780671	14725	-0.231	0.0563	No
74	SCARB1	510441 6770047	15225	-0.393	0.0316	No
75	PFKP	70138 6760040 1170278	15394	-0.474	0.0253	No
76	NUP37	2370097 6370435 6380008	15445	-0.499	0.0255	No
77	PCCA	3390400	15690	-0.634	0.0161	No
78	SFXN4	60750 4560059	15768	-0.671	0.0158	No
79	PAPSS2	870113	15898	-0.746	0.0132	No
80	STATIP1	4480022 6940097	16296	-1.003	-0.0023	No
81	DYNLL1	5570113	16499	-1.189	-0.0063	No
82	CFDP1	7000112	16547	-1.231	-0.0016	No
83	DDX20	3290348	16567	-1.249	0.0046	No
84	SNUPN	5050131	16729	-1.410	0.0042	No
85	BLOC1S2	1240215	17173	-1.931	-0.0085	No
86	PYCARD	2100750	17607	-2.625	-0.0165	No
87	SCIN	5420180	18442	-5.806	-0.0276	No
88	CASP7	4210156	18505	-6.324	0.0060	No