Details for gene set V$USF

Table: GSEA Results Summary

Dataset	Set_03_absentNotch_versus_truncNotch.phenotype_absentNotch_versus_truncNotch.cls #truncNotch_versus_absentNotch
Phenotype	phenotype_absentNotch_versus_truncNotch.cls#truncNotch_versus_absentNotch
Upregulated in class	absentNotch
GeneSet	V$USF_01
Enrichment Score (ES)	-0.57777905
Normalized Enrichment Score (NES)	-1.7306774
Nominal p-value	0.0
FDR q-value	0.0057553705
FWER p-Value	0.058

Table: GSEA details [plain text format]
	PROBE	DESCRIPTION (from dataset)	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	PLCG2	5720008	736	2.352	-0.0247	No
2	MRPL27	2060131	766	2.304	-0.0114	No
3	CHD4	5420059 6130338 6380717	827	2.234	-0.0002	No
4	SCYL1	5050717	1112	1.906	-0.0033	No
5	HTATIP	5360739	1143	1.881	0.0073	No
6	GNAS	630441 1850373 4050152	1257	1.771	0.0126	No
7	MYST3	5270500	1396	1.648	0.0158	No
8	BAX	3830008	1523	1.555	0.0190	No
9	EEF1B2	4850400 6130161	1533	1.547	0.0285	No
10	TEF	1050050 3120397 4060487	1555	1.531	0.0372	No
11	ISGF3G	3190131 7100142	1681	1.463	0.0399	No
12	DHX35	1230440	1774	1.388	0.0439	No
13	OPRS1	6130128 6290717	2359	0.994	0.0187	No
14	ALG1	2570112	2396	0.973	0.0230	No
15	GNB2	2350053	2517	0.898	0.0223	No
16	TAF6L	1850056	2521	0.895	0.0279	No
17	RAB24	520601 4540739	2614	0.846	0.0284	No
18	RBBP4	6650528	2771	0.764	0.0249	No
19	CLN3	780368	2833	0.729	0.0263	No
20	VPS33A	780113	2917	0.683	0.0262	No
21	ZNF318	5890091 6130021	3031	0.636	0.0242	No
22	AKAP10	2630504 5910577	3117	0.603	0.0235	No
23	EPC1	1570050 5290095 6900193	3372	0.514	0.0130	No
24	EIF3S10	1190079 3840176	3518	0.465	0.0082	No
25	TSC1	1850672	3536	0.461	0.0103	No
26	SLC12A6	610278 1980035 5340671	3563	0.454	0.0118	No
27	COPZ1	6940100	3620	0.436	0.0116	No
28	NFX1	450504	3647	0.430	0.0129	No
29	HOXB7	4540706 4610358	3662	0.426	0.0149	No
30	SGOL1	1980075 5220092 6020711	3729	0.410	0.0140	No
31	TESK2	6520524	4046	0.344	-0.0009	No
32	GABARAP	1450286	4052	0.343	0.0010	No
33	HMGN2	3140091	4113	0.332	-0.0001	No
34	POLR3C	6940546	4162	0.324	-0.0006	No
35	NEUROD1	3060619	4212	0.316	-0.0012	No
36	RANBP1	430215 1090180	4516	0.266	-0.0159	No
37	OPRD1	4280138	4577	0.256	-0.0175	No
38	NRIP3	1340372	4705	0.240	-0.0228	No
39	MCOLN1	4480563	4889	0.220	-0.0313	No
40	ESR2	6220138	5254	0.179	-0.0499	No
41	DNMT3A	4050068 4810717	5504	0.159	-0.0624	No
42	RAB3IL1	380685 5420176	5644	0.149	-0.0690	No
43	GGN	1410528 4210082 5290170	5736	0.142	-0.0730	No
44	PHC3	4920332	5790	0.138	-0.0750	No
45	RNF146	1660735	6007	0.123	-0.0859	No
46	GTF2A1	4120138 4920524 5390110 1230397	6098	0.118	-0.0900	No
47	HOXB5	2900538	6179	0.114	-0.0936	No
48	MCM2	5050139	6622	0.092	-0.1170	No
49	ELAVL3	2850014	6720	0.088	-0.1217	No
50	RAD9A	110300 1940632 3990390 6040014	6817	0.084	-0.1263	No
51	TOM1L2	4810465	6830	0.084	-0.1264	No
52	RGL1	1500097 6900450	6958	0.079	-0.1328	No
53	IRS4	430341 1190450	7411	0.064	-0.1569	No
54	ODC1	5670168	7414	0.064	-0.1566	No
55	FSHR	610041 7040121	7451	0.063	-0.1581	No
56	GATA5	430465	7483	0.062	-0.1594	No
57	SYT3	6380017	7598	0.059	-0.1652	No
58	SEPT3	3830022 5290079	7604	0.059	-0.1651	No
59	HOXC5	1580017	7853	0.054	-0.1782	No
60	GTF2H1	2570746 2650148	8154	0.047	-0.1942	No
61	SLC26A2	2360278	8250	0.044	-0.1990	No
62	BMP4	380113	8268	0.044	-0.1997	No
63	BHLHB3	3450438	8505	0.039	-0.2122	No
64	VPS16	430064 3390041 6860301	8551	0.038	-0.2144	No
65	CPT1A	6350093	8589	0.038	-0.2162	No
66	FMR1	5050075	8594	0.037	-0.2161	No
67	BDNF	2940128 3520368	8647	0.036	-0.2187	No
68	SLC1A7	1990181	8849	0.032	-0.2294	No
69	DUSP7	2940309	8893	0.031	-0.2316	No
70	SLC36A1	5080242	8897	0.031	-0.2315	No
71	CGN	5890139 6370167 6400537	8998	0.029	-0.2368	No
72	DVL2	6110162	9171	0.025	-0.2459	No
73	PCDHA10	3830725	9437	0.021	-0.2602	No
74	HOXD10	6100039	10161	0.009	-0.2993	No
75	HOXA11	6980133	10253	0.007	-0.3042	No
76	UTY	5890441	11032	-0.006	-0.3463	No
77	KIAA1715	1190551	11115	-0.008	-0.3507	No
78	NDUFS1	2650253	11118	-0.008	-0.3508	No
79	XPO1	540707	11124	-0.008	-0.3510	No
80	ADAM10	3780156	11270	-0.010	-0.3588	No
81	USP15	610592 3520504	11380	-0.012	-0.3647	No
82	HOXA9	610494 4730040 5130601	11544	-0.016	-0.3734	No
83	UBE2B	4780497	11559	-0.016	-0.3740	No
84	ARMET	5130670	11642	-0.017	-0.3784	No
85	HOXA1	1190524 5420142	11646	-0.017	-0.3784	No
86	CUL5	450142	11750	-0.019	-0.3839	No
87	PPP1R3C	2640170	11817	-0.021	-0.3873	No
88	AP1S2	780279 4280707	11872	-0.022	-0.3901	No
89	TRIM37	5270091	12097	-0.026	-0.4021	No
90	ETV1	70735 2940603 5080463	12133	-0.027	-0.4038	No
91	SET	6650286	12253	-0.030	-0.4101	No
92	ARPC5	1740411 3450300	12360	-0.033	-0.4156	No
93	NPM1	4730427	12434	-0.034	-0.4194	No
94	POGK	5290315	12462	-0.035	-0.4206	No
95	GLA	4610364	12544	-0.038	-0.4247	No
96	HNRPH2	2630040 5720671	12721	-0.042	-0.4340	No
97	NPTX1	3710736	12876	-0.047	-0.4421	No
98	RARG	6760136	13002	-0.051	-0.4485	No
99	AKAP1	110148 1740735 2260019 7000563	13064	-0.053	-0.4515	No
100	FOXD3	6550156	13862	-0.092	-0.4941	No
101	JMJD2C	3290341	13956	-0.099	-0.4985	No
102	SC5DL	6650390	14031	-0.106	-0.5018	No
103	MTCH2	3780603 6620215	14066	-0.109	-0.5030	No
104	HOXA7	5910152	14119	-0.113	-0.5051	No
105	HNRPD	4120021	14130	-0.114	-0.5049	No
106	APEX1	3190519	14319	-0.136	-0.5142	No
107	DUSP1	6860121	14399	-0.144	-0.5175	No
108	SUMF1	730050	14547	-0.166	-0.5244	No
109	SNX5	1570021 6860609	14550	-0.166	-0.5235	No
110	FEN1	1770541	14554	-0.166	-0.5226	No
111	DIRC2	2810494	14749	-0.205	-0.5317	No
112	BRDT	3940102	14911	-0.238	-0.5389	No
113	SSR1	5890100	14958	-0.251	-0.5398	No
114	EIF4E	1580403 70133 6380215	15012	-0.264	-0.5410	No
115	TOM1	940398 2190053	15023	-0.267	-0.5398	No
116	OSGEP	5700239	15063	-0.279	-0.5401	No
117	SLC38A2	1470242 3800026	15153	-0.306	-0.5430	No
118	PICALM	1940280	15162	-0.310	-0.5414	No
119	NIT1	1230338 3940671	15372	-0.377	-0.5503	No
120	RPL13A	2680519 5700142	15430	-0.397	-0.5508	No
121	PER1	3290315	15546	-0.433	-0.5542	No
122	RAI14	770288 1660075	15953	-0.607	-0.5723	Yes
123	RBBP6	2320129	15969	-0.613	-0.5692	Yes
124	ATIC	4010593 6380463	15980	-0.616	-0.5657	Yes
125	CSRP2BP	4570717 5550333	15991	-0.621	-0.5623	Yes
126	UBXD3	5050193	16018	-0.634	-0.5596	Yes
127	SLC31A2	1450577	16053	-0.648	-0.5572	Yes
128	SMYD4	2640403	16089	-0.661	-0.5549	Yes
129	TNRC15	6760746	16090	-0.662	-0.5506	Yes
130	ZFYVE26	6860152	16114	-0.675	-0.5475	Yes
131	COMMD8	5890358	16162	-0.707	-0.5454	Yes
132	GPX1	4150093	16271	-0.768	-0.5463	Yes
133	HSPBAP1	4060022	16783	-1.057	-0.5672	Yes
134	ATF7IP	2690176 6770021	16979	-1.212	-0.5699	Yes
135	TFRC	4050551	17049	-1.269	-0.5655	Yes
136	HOXB4	540131	17071	-1.296	-0.5582	Yes
137	ATF4	730441 1740195	17104	-1.330	-0.5514	Yes
138	ILF3	940722 3190647 6520110	17224	-1.453	-0.5484	Yes
139	HMOX1	1740687	17236	-1.468	-0.5395	Yes
140	BOK	1170373 5860446	17301	-1.535	-0.5331	Yes
141	PFDN2	4230156	17322	-1.560	-0.5241	Yes
142	STX6	4850750 6770278	17360	-1.604	-0.5157	Yes
143	MAX	5220021	17406	-1.661	-0.5074	Yes
144	SIRT1	1190731	17426	-1.676	-0.4976	Yes
145	NUDC	4780025	17469	-1.732	-0.4887	Yes
146	STMN1	1990717	17470	-1.733	-0.4775	Yes
147	UTX	2900017 6770452	17486	-1.741	-0.4671	Yes
148	ZCCHC7	6510592	17506	-1.769	-0.4567	Yes
149	PRPS1	6350129	17567	-1.834	-0.4480	Yes
150	ALDH6A1	1770746	17581	-1.852	-0.4368	Yes
151	CCAR1	3190092	17750	-2.089	-0.4324	Yes
152	AKAP12	1450739	17771	-2.116	-0.4198	Yes
153	EIF4B	5390563 5270577	17772	-2.116	-0.4061	Yes
154	TIMM8A	110279	17789	-2.135	-0.3932	Yes
155	LAMP1	2470524	17867	-2.240	-0.3829	Yes
156	PPM1A	1170301 5900273	17938	-2.352	-0.3714	Yes
157	ATP6V1A	6590242	17950	-2.364	-0.3568	Yes
158	U2AF2	450600 4670128 5420292	17972	-2.405	-0.3423	Yes
159	COMMD3	2510259	17990	-2.440	-0.3275	Yes
160	HTF9C	3190048 4120132	18033	-2.513	-0.3135	Yes
161	MORF4L2	6450133	18050	-2.548	-0.2979	Yes
162	IGF2R	1570402	18072	-2.593	-0.2823	Yes
163	AATF	5220575	18074	-2.600	-0.2655	Yes
164	GSK3B	5360348	18106	-2.696	-0.2498	Yes
165	EIF4G1	4070446	18120	-2.717	-0.2329	Yes
166	DDX3X	2190020	18122	-2.725	-0.2154	Yes
167	RPA1	360452	18150	-2.775	-0.1989	Yes
168	BRD2	1450300 5340484 6100605	18220	-2.955	-0.1835	Yes
169	HPS3	6650348	18274	-3.080	-0.1665	Yes
170	GNA13	4590102	18371	-3.438	-0.1495	Yes
171	TOPORS	4060592	18389	-3.500	-0.1278	Yes
172	KBTBD2	2320014	18404	-3.580	-0.1054	Yes
173	DCTN4	3390010 5550170	18420	-3.620	-0.0828	Yes
174	PTMA	5570148	18446	-3.752	-0.0599	Yes
175	CD164	3830594	18548	-4.479	-0.0364	Yes
176	UBE4B	780008 3610154	18612	-6.192	0.0002	Yes