Details for gene set V$PAX

Table: GSEA Results Summary

Dataset	Set_03_absentNotch_versus_truncNotch.phenotype_absentNotch_versus_truncNotch.cls #truncNotch_versus_absentNotch
Phenotype	phenotype_absentNotch_versus_truncNotch.cls#truncNotch_versus_absentNotch
Upregulated in class	truncNotch
GeneSet	V$PAX_Q6
Enrichment Score (ES)	0.44144616
Normalized Enrichment Score (NES)	1.2845558
Nominal p-value	0.02782071
FDR q-value	0.9657697
FWER p-Value	1.0

Table: GSEA details [plain text format]
	PROBE	DESCRIPTION (from dataset)	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	FLOT1	1660575 1690040	2	6.562	0.0514	Yes
2	EDG5	2640300	150	3.760	0.0729	Yes
3	AKT1S1	1660048	200	3.525	0.0980	Yes
4	BCL9L	6940053	298	3.207	0.1179	Yes
5	PTPN6	4230128	340	3.085	0.1399	Yes
6	PRKCH	5720079	360	3.044	0.1627	Yes
7	EGLN2	540086	543	2.645	0.1736	Yes
8	ICAM1	6980138	577	2.609	0.1923	Yes
9	ETV5	110017	582	2.603	0.2125	Yes
10	PPP1R9B	3130619	599	2.558	0.2317	Yes
11	TLE3	580040 4730121	609	2.546	0.2512	Yes
12	WBP1	6100066	649	2.495	0.2687	Yes
13	FBXO36	1410086	740	2.343	0.2822	Yes
14	MRPL27	2060131	766	2.304	0.2989	Yes
15	TBC1D17	1780450	813	2.248	0.3141	Yes
16	THAP7	6660673	1001	2.020	0.3198	Yes
17	FEZ2	5910181	1118	1.902	0.3284	Yes
18	UBE2C	6130017	1159	1.873	0.3410	Yes
19	MRPS6	870164	1254	1.772	0.3498	Yes
20	TBCC	4810021	1316	1.723	0.3600	Yes
21	ETV6	610524	1466	1.594	0.3644	Yes
22	BATF	6760390	1501	1.569	0.3749	Yes
23	TIGD3	3850576	1587	1.511	0.3821	Yes
24	CACNA2D3	4010184	1642	1.486	0.3909	Yes
25	NFATC1	510400 2320348 4050600 6180161 6290136 6620086	1737	1.420	0.3969	Yes
26	IER3	5860021	1773	1.389	0.4059	Yes
27	SERPING1	5550440	1821	1.332	0.4138	Yes
28	LENG9	3060072	1877	1.294	0.4210	Yes
29	SLC1A4	5290064	1923	1.264	0.4285	Yes
30	ARL3	5690725	1988	1.217	0.4346	Yes
31	RGS3	60670 540736 1340180 1500369 3390735 4010131 4610402 6380114	2154	1.101	0.4343	Yes
32	TWIST1	5130619	2330	1.005	0.4327	Yes
33	MRPL40	2370215	2424	0.951	0.4351	Yes
34	LMAN2	430154	2552	0.876	0.4351	Yes
35	GATA1	6400068	2702	0.799	0.4332	Yes
36	TPM3	670600 3170296 5670167 6650471	2876	0.702	0.4294	Yes
37	CHN2	870528	2952	0.671	0.4306	Yes
38	HIRA	4480609 5270167	3125	0.601	0.4260	Yes
39	TNFSF10	3170300	3144	0.594	0.4296	Yes
40	WWOX	510008 870524 1090114	3162	0.588	0.4333	Yes
41	EGR3	6940128	3176	0.582	0.4372	Yes
42	PRG4	5860156 6650086	3183	0.581	0.4414	Yes
43	GRAP2	7100441 1410647	3499	0.469	0.4280	No
44	ACTN3	3140541 6480598	3698	0.418	0.4206	No
45	BLVRB	7040707	3730	0.410	0.4221	No
46	PTK7	380315	3756	0.404	0.4239	No
47	JMJD2B	6350372 6400471	3840	0.387	0.4225	No
48	SFXN2	2650563 3140095 3830762 3870398	4089	0.335	0.4116	No
49	ATP2C1	2630446 6520253	4121	0.331	0.4126	No
50	HOXB2	6450592	4220	0.314	0.4097	No
51	OFCC1	2060392	4239	0.311	0.4112	No
52	SYNPO2L	5390719	4256	0.308	0.4127	No
53	PHACTR3	3850435 5900445	4336	0.294	0.4108	No
54	CASKIN2	2030113	4368	0.288	0.4113	No
55	ITGB4	1740021 3840482	4518	0.265	0.4053	No
56	GNB4	3390079 4230035	4520	0.265	0.4074	No
57	TAF5	3450288 5890193 6860435	4591	0.254	0.4056	No
58	TNKS1BP1	7040184	4620	0.250	0.4060	No
59	LRRK1	2810609	4626	0.250	0.4077	No
60	TRPM3	2470110 6400731 6550047	4667	0.245	0.4075	No
61	DOCK4	5910102	4811	0.229	0.4015	No
62	CHRNA2	5050315	5026	0.205	0.3915	No
63	FLNC	2360048 5050270	5349	0.171	0.3754	No
64	MYO18B	7100670	5401	0.167	0.3739	No
65	BRUNOL4	4490452 5080451	5441	0.164	0.3731	No
66	BRS3	1740403	5781	0.138	0.3558	No
67	CYR61	1240408 5290026 4120452 6550008	5791	0.138	0.3564	No
68	HOXC4	1940193	5855	0.134	0.3540	No
69	B4GALT5	1230692	5916	0.129	0.3518	No
70	USH1G	2940446	6135	0.116	0.3408	No
71	SLITRK5	6590292	6172	0.115	0.3398	No
72	PPARD	110131	6238	0.111	0.3371	No
73	MUSK	1190113	6411	0.101	0.3286	No
74	OTOP2	610068	6523	0.096	0.3233	No
75	RFX5	5420128	6661	0.091	0.3166	No
76	VWF	4670519	6858	0.083	0.3066	No
77	FGF10	730458 840706	6977	0.079	0.3008	No
78	NRP2	4070400 5860041 6650446	7011	0.077	0.2997	No
79	RFX4	3710100 5340215	7382	0.065	0.2801	No
80	A2M	6620039	7534	0.061	0.2724	No
81	MOBKL2C	2640088 3830017	7577	0.060	0.2706	No
82	TRIB1	2320435	7647	0.058	0.2673	No
83	RCL1	1980408 2680008 3800176	7946	0.051	0.2515	No
84	HOXA5	6840026	8304	0.043	0.2325	No
85	ELP4	1230576	8484	0.040	0.2231	No
86	NRG1	1050332	8525	0.039	0.2212	No
87	SPATS2	2360066	8545	0.039	0.2205	No
88	BDNF	2940128 3520368	8647	0.036	0.2153	No
89	SLC26A7	1850398 3830377	8768	0.033	0.2091	No
90	FOXA1	3710609	8791	0.033	0.2081	No
91	GJB1	1240441	8839	0.032	0.2058	No
92	PRDM1	3170347 3520301	8950	0.030	0.2001	No
93	PRRX1	4120193 4480390	9053	0.028	0.1948	No
94	FGF14	2630390 3520075 6770048	9223	0.024	0.1858	No
95	SRPX	580717 1980162	9303	0.023	0.1817	No
96	TGFBR1	1400148 4280020 6550711	9349	0.022	0.1794	No
97	GRIA1	1340152 3780750 4920440	9369	0.022	0.1786	No
98	LMO4	3800746	9397	0.021	0.1773	No
99	SFTPC	3290133	9407	0.021	0.1769	No
100	CDH16	1450129	9634	0.017	0.1648	No
101	PAX3	50551	9645	0.017	0.1644	No
102	SPTBN4	4150279 5270286	9729	0.016	0.1600	No
103	XPR1	1500093	9745	0.015	0.1593	No
104	JAG1	3440390	9767	0.015	0.1583	No
105	ADRA2C	5130154	9912	0.013	0.1506	No
106	CRLF1	3520092	10036	0.010	0.1440	No
107	PDHA2	2630438	10094	0.010	0.1410	No
108	HNT	6450731	10146	0.009	0.1383	No
109	TMPRSS5	4060068	10151	0.009	0.1381	No
110	NKX2-8	50022	10156	0.009	0.1380	No
111	PLAC1	2350594	10291	0.006	0.1308	No
112	BET1	4010725	10335	0.006	0.1285	No
113	SP7	1050315	10445	0.004	0.1226	No
114	BMP5	4670048	10581	0.001	0.1153	No
115	TAL1	7040239	10620	0.001	0.1132	No
116	CP	2570484	10734	-0.001	0.1071	No
117	CHRDL1	1580037 6380204	10750	-0.001	0.1063	No
118	CHML	6650156	11003	-0.005	0.0927	No
119	P4HA2	1090546	11103	-0.007	0.0874	No
120	GTPBP1	2230541 4560528	11381	-0.012	0.0724	No
121	SPRY2	5860184	11448	-0.014	0.0690	No
122	CRYGB	2340593	11547	-0.016	0.0638	No
123	TEAD1	2470551	11592	-0.016	0.0615	No
124	TGFB3	1070041	11664	-0.017	0.0578	No
125	ACCN1	2060139 2190541	11830	-0.021	0.0490	No
126	UPK2	60176	11837	-0.021	0.0488	No
127	EMX2	1660092	11898	-0.022	0.0458	No
128	MYF6	2690576	11901	-0.022	0.0458	No
129	HNF4G	5720451	12001	-0.025	0.0407	No
130	HOXB9	2640687	12230	-0.029	0.0285	No
131	SKIL	1090364	12261	-0.030	0.0271	No
132	HOXD3	6450154	12268	-0.030	0.0270	No
133	GSC	1580685	12276	-0.030	0.0269	No
134	CHRND	840403 2260670	12359	-0.033	0.0227	No
135	BNC1	5550427	12403	-0.034	0.0206	No
136	IRX3	4200112	12472	-0.036	0.0172	No
137	ARHGAP12	1050181	12556	-0.038	0.0130	No
138	SNCAIP	4010551	12736	-0.043	0.0036	No
139	OIT3	1660152	12775	-0.044	0.0019	No
140	T	6370164	13111	-0.055	-0.0158	No
141	KCNIP2	60088 1780324	13132	-0.055	-0.0165	No
142	SEMA3A	1780064	13262	-0.061	-0.0230	No
143	DHH	2120433	13487	-0.070	-0.0346	No
144	PFTK1	1780181	13767	-0.086	-0.0491	No
145	NTRK1	6400538	13833	-0.091	-0.0519	No
146	PTCH2	2900092	13904	-0.096	-0.0549	No
147	ZIC3	380020	13960	-0.100	-0.0571	No
148	ATF3	1940546	14024	-0.105	-0.0597	No
149	KCNA2	5080403	14027	-0.105	-0.0590	No
150	HAVCR2	6860592	14151	-0.116	-0.0648	No
151	ITGA7	1230739	14183	-0.120	-0.0655	No
152	AMD1	6290128	14673	-0.188	-0.0906	No
153	LUZP1	940075 4280458 6180070	14789	-0.213	-0.0951	No
154	RNF34	3800332 4590717 5670138	14888	-0.232	-0.0986	No
155	EN1	5360168 7050025	15069	-0.281	-0.1062	No
156	BCL2L2	2760692 6770739	15120	-0.296	-0.1066	No
157	SLCO3A1	1050408 2370156 6110072	15329	-0.360	-0.1150	No
158	SP6	60484 510452 2690333	15341	-0.366	-0.1128	No
159	AMOTL1	380279	15349	-0.370	-0.1102	No
160	DNTTIP1	5360537	15452	-0.403	-0.1126	No
161	NEDD4	460736 1190280	15556	-0.438	-0.1147	No
162	GPR85	5130750 5910020	15793	-0.530	-0.1234	No
163	CHD2	4070039	15963	-0.611	-0.1278	No
164	MOSPD1	2030170 5270156 6900142	16002	-0.626	-0.1249	No
165	HHEX	2340575	16159	-0.703	-0.1279	No
166	PPP1R12A	4070066 4590162	16223	-0.748	-0.1254	No
167	PPARGC1B	3290114	16381	-0.828	-0.1274	No
168	MYADM	4230132	16517	-0.905	-0.1276	No
169	GATA3	6130068	16668	-0.991	-0.1280	No
170	UBE2H	1980142 2970079	16734	-1.024	-0.1235	No
171	MAP2K6	1230056 2940204	16855	-1.102	-0.1213	No
172	MBNL1	2640762 7100048	17040	-1.263	-0.1214	No
173	BZW1	460270	17347	-1.584	-0.1256	No
174	LDB1	5270601	17353	-1.597	-0.1133	No
175	MCTS1	6130133	17468	-1.732	-0.1059	No
176	SOCS2	4760692	17492	-1.751	-0.0934	No
177	RUNX1	3840711	17573	-1.837	-0.0833	No
178	SLIT3	7100132	17591	-1.864	-0.0696	No
179	PPID	2680707	17702	-2.022	-0.0597	No
180	BTG1	4200735 6040131 6200133	17833	-2.195	-0.0495	No
181	STIP1	6450390	17842	-2.205	-0.0327	No
182	OSBPL9	2570373	17913	-2.316	-0.0183	No
183	LUC7L	6040156 6110411	18294	-3.137	-0.0143	No
184	METAP1	3520632	18495	-4.035	0.0066	No