Details for gene set V$E2F

Table: GSEA Results Summary

Dataset	Set_03_absentNotch_versus_truncNotch.phenotype_absentNotch_versus_truncNotch.cls #truncNotch_versus_absentNotch
Phenotype	phenotype_absentNotch_versus_truncNotch.cls#truncNotch_versus_absentNotch
Upregulated in class	absentNotch
GeneSet	V$E2F_Q6
Enrichment Score (ES)	-0.5904007
Normalized Enrichment Score (NES)	-1.7527208
Nominal p-value	0.0
FDR q-value	0.005390829
FWER p-Value	0.045

Table: GSEA details [plain text format]
	PROBE	DESCRIPTION (from dataset)	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	HIST1H2BK	6130433	400	2.931	-0.0032	No
2	HIST1H4A	1940600	850	2.198	-0.0136	No
3	MXD3	6220014	879	2.166	-0.0015	No
4	UNG	3130110 6100364	931	2.088	0.0089	No
5	MAZ	3360121 6940750	973	2.048	0.0196	No
6	POLD1	4830026	1142	1.881	0.0224	No
7	ACBD6	4200446	1685	1.462	0.0023	No
8	SYNGR4	6520450	1888	1.286	-0.0005	No
9	SFRS2	50707 380593	1955	1.237	0.0037	No
10	TYRO3	3130193	2073	1.158	0.0047	No
11	ATF5	5670685	2075	1.156	0.0119	No
12	RRM2	6350059 6940162	2198	1.075	0.0121	No
13	USP52	3710215 6380133	2231	1.057	0.0170	No
14	SFRS10	6130528 6400438 7040112	2363	0.992	0.0162	No
15	MRPL40	2370215	2424	0.951	0.0189	No
16	AP4M1	70609 3440128	2460	0.936	0.0229	No
17	HIRA	4480609 5270167	3125	0.601	-0.0092	No
18	PHF13	450435	3129	0.599	-0.0056	No
19	PAQR4	730736	3238	0.559	-0.0079	No
20	POLR2A	5220647	3275	0.546	-0.0064	No
21	NUP62	1240128	3277	0.545	-0.0031	No
22	DDB2	3520341 4610168 4850184 4920717	3484	0.473	-0.0112	No
23	ATAD2	870242 2260687	3521	0.464	-0.0102	No
24	NELL2	2340725 4280301 5420008	3775	0.399	-0.0214	No
25	PVRL1	2570167 5220519 5890500 3190309	3838	0.388	-0.0223	No
26	ING3	110438 2060390	3864	0.380	-0.0213	No
27	SEMA6A	2690138 3060021	3958	0.359	-0.0241	No
28	CCNT1	2450563 5390184	4042	0.345	-0.0264	No
29	HMGN2	3140091	4113	0.332	-0.0281	No
30	ZBTB4	6450441	4175	0.322	-0.0294	No
31	HCN3	3940438 6840750	4223	0.314	-0.0299	No
32	IL4I1	3190161	4360	0.291	-0.0354	No
33	YBX2	3520441	4453	0.275	-0.0387	No
34	RANBP1	430215 1090180	4516	0.266	-0.0404	No
35	SEMA5A	6200110 6520435	4608	0.252	-0.0437	No
36	KCND2	1170128 2100112	4632	0.250	-0.0434	No
37	RPS6KA5	2120563 7040546	4718	0.239	-0.0465	No
38	HOXC10	5360170	5028	0.204	-0.0619	No
39	PIM1	630047	5122	0.191	-0.0658	No
40	HNRPR	2320440 2900601 4610008	5478	0.161	-0.0840	No
41	HNRPUL1	2120008 4920408 5570180 6370609 6770403	5720	0.143	-0.0961	No
42	ARID4A	520156 1050707	5866	0.134	-0.1031	No
43	CASP8AP2	5910593	6044	0.121	-0.1119	No
44	MCM8	6130743	6068	0.120	-0.1124	No
45	EPHB1	4610056	6212	0.113	-0.1195	No
46	DNAJC9	6130019	6495	0.098	-0.1341	No
47	RAD51	6110450 6980280	6595	0.093	-0.1389	No
48	MCM2	5050139	6622	0.092	-0.1397	No
49	PODN	3710068	6754	0.087	-0.1463	No
50	NRP2	4070400 5860041 6650446	7011	0.077	-0.1596	No
51	STK35	2360121	7089	0.075	-0.1633	No
52	IPO7	2190746	7698	0.057	-0.1959	No
53	GPRC5B	2760114	7700	0.057	-0.1956	No
54	DMD	1740041 3990332	8227	0.045	-0.2238	No
55	EFNA5	460707 2190519	8310	0.043	-0.2280	No
56	POLE2	6110041	8692	0.035	-0.2484	No
57	PAX6	1190025	8766	0.033	-0.2521	No
58	INSM1	3450671	8918	0.030	-0.2601	No
59	TREX2	4920707	9123	0.027	-0.2710	No
60	PRKDC	1400072 4230541	9149	0.026	-0.2722	No
61	GABRB3	4150164	9725	0.016	-0.3032	No
62	CBX5	3830072 6290167	9780	0.015	-0.3061	No
63	ARHGAP6	2060121	9984	0.011	-0.3170	No
64	FBXO5	2630551	10381	0.005	-0.3384	No
65	NUP153	7000452	10430	0.004	-0.3410	No
66	STAG1	1190300 1400722 4590100	10654	0.000	-0.3530	No
67	RQCD1	1850139	11417	-0.013	-0.3942	No
68	SMAD6	870504	11766	-0.019	-0.4130	No
69	SLC6A4	2230372	11889	-0.022	-0.4194	No
70	RHD	4050168	11944	-0.023	-0.4222	No
71	FMO4	360735	12306	-0.031	-0.4416	No
72	GRIA4	2640131	12364	-0.033	-0.4444	No
73	JPH1	610739	12535	-0.037	-0.4534	No
74	UXT	110019 5080066	12655	-0.041	-0.4596	No
75	PRPF4B	940181 2570300	12711	-0.042	-0.4623	No
76	PCSK1	2350148	13045	-0.053	-0.4800	No
77	KCNA6	450291 1400086 1660291 2470576	13058	-0.053	-0.4803	No
78	SP3	3840338	13400	-0.066	-0.4984	No
79	TOPBP1	6020333	14021	-0.105	-0.5313	No
80	FHOD1	2680279	14061	-0.108	-0.5327	No
81	E2F7	4200056	14092	-0.111	-0.5336	No
82	HNRPD	4120021	14130	-0.114	-0.5349	No
83	HS6ST3	5910138	14177	-0.119	-0.5367	No
84	POLA2	940519	14472	-0.155	-0.5516	No
85	ERBB2IP	580253 1090672	14707	-0.196	-0.5630	No
86	PPP1R8	6290292	14831	-0.219	-0.5683	No
87	STAG2	4540132	14978	-0.254	-0.5746	No
88	ADAMTS2	2650025 6370133 6840670	15018	-0.265	-0.5751	No
89	CORT	360008 2340092	15075	-0.283	-0.5763	No
90	ASXL2	130670	15110	-0.294	-0.5763	No
91	CDC45L	70537 3130114	15150	-0.305	-0.5765	No
92	WEE1	3390070	15186	-0.317	-0.5764	No
93	HIST1H2AH	3710333	15285	-0.348	-0.5795	No
94	E2F3	50162 460180	15296	-0.350	-0.5778	No
95	SLCO3A1	1050408 2370156 6110072	15329	-0.360	-0.5773	No
96	SLC38A1	520465	15529	-0.429	-0.5854	No
97	TBX6	4730139 6840647	15614	-0.462	-0.5870	No
98	CLSPN	2190239 2630687 5550632	15678	-0.483	-0.5874	Yes
99	MSH2	6180273	15689	-0.488	-0.5848	Yes
100	EZH2	6130605 6380524	15735	-0.506	-0.5841	Yes
101	CDT1	3780682	15749	-0.514	-0.5815	Yes
102	PHF15	6550066 6860673	15765	-0.521	-0.5790	Yes
103	CDC6	4570296 5360600	15903	-0.578	-0.5828	Yes
104	USP37	2470433	15910	-0.580	-0.5795	Yes
105	MCM7	3290292 5220056	15954	-0.607	-0.5780	Yes
106	RAB11B	3990609	15972	-0.614	-0.5750	Yes
107	MCM3	5570068	16006	-0.627	-0.5729	Yes
108	MYH10	2640673	16190	-0.718	-0.5782	Yes
109	DNAJC11	360465 3390215	16193	-0.723	-0.5738	Yes
110	PHF5A	2690519	16239	-0.753	-0.5715	Yes
111	SNRPD1	4480162	16420	-0.847	-0.5759	Yes
112	GMNN	2630148	16617	-0.965	-0.5804	Yes
113	NOLC1	2350195	16652	-0.983	-0.5760	Yes
114	PPP1CC	6380300 2510647	16673	-0.993	-0.5709	Yes
115	AK2	4590458 4760195 6110097	16738	-1.028	-0.5678	Yes
116	SFRS7	2760408	16758	-1.040	-0.5623	Yes
117	UFD1L	870020	16843	-1.092	-0.5600	Yes
118	FANCD2	1850280 6840348	16917	-1.150	-0.5567	Yes
119	E2F1	5360093	17060	-1.284	-0.5562	Yes
120	MCM6	60092 540181 6510110	17090	-1.312	-0.5495	Yes
121	SUMO1	1990364 2760338 6380195	17158	-1.382	-0.5444	Yes
122	HNRPA1	4670398 5050687	17220	-1.449	-0.5386	Yes
123	ILF3	940722 3190647 6520110	17224	-1.453	-0.5296	Yes
124	NCL	2360463 4540279	17306	-1.541	-0.5243	Yes
125	CDC25A	3800184	17420	-1.670	-0.5198	Yes
126	STMN1	1990717	17470	-1.733	-0.5116	Yes
127	POLE4	6860097	17513	-1.773	-0.5027	Yes
128	ACO2	4230600	17559	-1.827	-0.4936	Yes
129	PRPS1	6350129	17567	-1.834	-0.4824	Yes
130	ALDH6A1	1770746	17581	-1.852	-0.4714	Yes
131	H2AFZ	1470168	17943	-2.360	-0.4761	Yes
132	HTF9C	3190048 4120132	18033	-2.513	-0.4650	Yes
133	POLD3	6400278	18117	-2.715	-0.4524	Yes
134	DNMT1	2260097	18211	-2.929	-0.4389	Yes
135	PCNA	940754	18279	-3.090	-0.4231	Yes
136	NASP	2260139 2940369 5130707	18304	-3.185	-0.4043	Yes
137	SOAT1	1190019	18328	-3.267	-0.3849	Yes
138	DCK	6900411	18333	-3.283	-0.3644	Yes
139	MCM4	2760673 5420711	18391	-3.505	-0.3454	Yes
140	PHC1	520195	18445	-3.750	-0.3246	Yes
141	BRMS1L	6110609	18462	-3.813	-0.3014	Yes
142	KPNB1	1690138	18464	-3.826	-0.2773	Yes
143	RBL1	3130372	18465	-3.829	-0.2532	Yes
144	CDCA7	3060097	18498	-4.044	-0.2294	Yes
145	EED	2320373	18506	-4.095	-0.2039	Yes
146	ZCCHC8	2260332 2350487	18511	-4.140	-0.1780	Yes
147	TMPO	4050494	18542	-4.448	-0.1516	Yes
148	UGCGL1	4230072	18553	-4.528	-0.1236	Yes
149	CTCF	5340017	18555	-4.586	-0.0947	Yes
150	SFRS1	2360440	18577	-4.846	-0.0652	Yes
151	PPM1D	1690193	18592	-5.188	-0.0333	Yes
152	GSPT1	5420050	18598	-5.469	0.0010	Yes