Details for gene set V$E2F

Table: GSEA Results Summary

Dataset	Set_03_absentNotch_versus_truncNotch.phenotype_absentNotch_versus_truncNotch.cls #truncNotch_versus_absentNotch
Phenotype	phenotype_absentNotch_versus_truncNotch.cls#truncNotch_versus_absentNotch
Upregulated in class	absentNotch
GeneSet	V$E2F_Q4
Enrichment Score (ES)	-0.6003529
Normalized Enrichment Score (NES)	-1.7972273
Nominal p-value	0.0
FDR q-value	0.0031416572
FWER p-Value	0.021

Table: GSEA details [plain text format]
	PROBE	DESCRIPTION (from dataset)	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	HIST1H2BK	6130433	400	2.931	-0.0030	No
2	MXD3	6220014	879	2.166	-0.0151	No
3	UNG	3130110 6100364	931	2.088	-0.0046	No
4	MAZ	3360121 6940750	973	2.048	0.0062	No
5	POLD1	4830026	1142	1.881	0.0090	No
6	ACBD6	4200446	1685	1.462	-0.0110	No
7	SYNGR4	6520450	1888	1.286	-0.0138	No
8	SFRS2	50707 380593	1955	1.237	-0.0095	No
9	TYRO3	3130193	2073	1.158	-0.0085	No
10	ATF5	5670685	2075	1.156	-0.0012	No
11	RRM2	6350059 6940162	2198	1.075	-0.0009	No
12	USP52	3710215 6380133	2231	1.057	0.0041	No
13	SFRS10	6130528 6400438 7040112	2363	0.992	0.0033	No
14	MRPL40	2370215	2424	0.951	0.0061	No
15	AP4M1	70609 3440128	2460	0.936	0.0101	No
16	HIRA	4480609 5270167	3125	0.601	-0.0220	No
17	PHF13	450435	3129	0.599	-0.0184	No
18	PAQR4	730736	3238	0.559	-0.0206	No
19	POLR2A	5220647	3275	0.546	-0.0191	No
20	NUP62	1240128	3277	0.545	-0.0157	No
21	EPC1	1570050 5290095 6900193	3372	0.514	-0.0175	No
22	DDB2	3520341 4610168 4850184 4920717	3484	0.473	-0.0205	No
23	ATAD2	870242 2260687	3521	0.464	-0.0195	No
24	NELL2	2340725 4280301 5420008	3775	0.399	-0.0307	No
25	PVRL1	2570167 5220519 5890500 3190309	3838	0.388	-0.0316	No
26	ING3	110438 2060390	3864	0.380	-0.0305	No
27	CCNT1	2450563 5390184	4042	0.345	-0.0379	No
28	HMGN2	3140091	4113	0.332	-0.0396	No
29	ZBTB4	6450441	4175	0.322	-0.0408	No
30	HCN3	3940438 6840750	4223	0.314	-0.0414	No
31	IL4I1	3190161	4360	0.291	-0.0469	No
32	YBX2	3520441	4453	0.275	-0.0501	No
33	RANBP1	430215 1090180	4516	0.266	-0.0518	No
34	SEMA5A	6200110 6520435	4608	0.252	-0.0551	No
35	KCND2	1170128 2100112	4632	0.250	-0.0548	No
36	RPS6KA5	2120563 7040546	4718	0.239	-0.0579	No
37	HOXC10	5360170	5028	0.204	-0.0733	No
38	PIM1	630047	5122	0.191	-0.0771	No
39	WNT3	2360685	5326	0.173	-0.0870	No
40	HNRPR	2320440 2900601 4610008	5478	0.161	-0.0942	No
41	HNRPUL1	2120008 4920408 5570180 6370609 6770403	5720	0.143	-0.1063	No
42	ARID4A	520156 1050707	5866	0.134	-0.1133	No
43	CASP8AP2	5910593	6044	0.121	-0.1222	No
44	MCM8	6130743	6068	0.120	-0.1226	No
45	EPHB1	4610056	6212	0.113	-0.1297	No
46	DNAJC9	6130019	6495	0.098	-0.1443	No
47	RAD51	6110450 6980280	6595	0.093	-0.1491	No
48	MCM2	5050139	6622	0.092	-0.1499	No
49	PODN	3710068	6754	0.087	-0.1564	No
50	NRP2	4070400 5860041 6650446	7011	0.077	-0.1698	No
51	STK35	2360121	7089	0.075	-0.1735	No
52	IPO7	2190746	7698	0.057	-0.2061	No
53	GPRC5B	2760114	7700	0.057	-0.2058	No
54	DMD	1740041 3990332	8227	0.045	-0.2340	No
55	EFNA5	460707 2190519	8310	0.043	-0.2381	No
56	POLE2	6110041	8692	0.035	-0.2586	No
57	PAX6	1190025	8766	0.033	-0.2623	No
58	INSM1	3450671	8918	0.030	-0.2703	No
59	TREX2	4920707	9123	0.027	-0.2812	No
60	PRKDC	1400072 4230541	9149	0.026	-0.2824	No
61	GABRB3	4150164	9725	0.016	-0.3134	No
62	CBX5	3830072 6290167	9780	0.015	-0.3162	No
63	ARHGAP6	2060121	9984	0.011	-0.3271	No
64	FBXO5	2630551	10381	0.005	-0.3486	No
65	NUP153	7000452	10430	0.004	-0.3511	No
66	STAG1	1190300 1400722 4590100	10654	0.000	-0.3632	No
67	CRK	1230162 4780128	10922	-0.004	-0.3777	No
68	RQCD1	1850139	11417	-0.013	-0.4043	No
69	SMAD6	870504	11766	-0.019	-0.4231	No
70	SLC6A4	2230372	11889	-0.022	-0.4295	No
71	RHD	4050168	11944	-0.023	-0.4323	No
72	ABI2	940368 4200092	12143	-0.028	-0.4428	No
73	FMO4	360735	12306	-0.031	-0.4514	No
74	GRIA4	2640131	12364	-0.033	-0.4543	No
75	JPH1	610739	12535	-0.037	-0.4633	No
76	UXT	110019 5080066	12655	-0.041	-0.4695	No
77	PCSK1	2350148	13045	-0.053	-0.4902	No
78	KCNA6	450291 1400086 1660291 2470576	13058	-0.053	-0.4905	No
79	SP3	3840338	13400	-0.066	-0.5086	No
80	TOPBP1	6020333	14021	-0.105	-0.5415	No
81	FHOD1	2680279	14061	-0.108	-0.5429	No
82	E2F7	4200056	14092	-0.111	-0.5438	No
83	HNRPD	4120021	14130	-0.114	-0.5451	No
84	HS6ST3	5910138	14177	-0.119	-0.5468	No
85	POLA2	940519	14472	-0.155	-0.5618	No
86	ERBB2IP	580253 1090672	14707	-0.196	-0.5732	No
87	PPP1R8	6290292	14831	-0.219	-0.5785	No
88	STAG2	4540132	14978	-0.254	-0.5847	No
89	ADAMTS2	2650025 6370133 6840670	15018	-0.265	-0.5852	No
90	CORT	360008 2340092	15075	-0.283	-0.5864	No
91	ASXL2	130670	15110	-0.294	-0.5864	No
92	CDC45L	70537 3130114	15150	-0.305	-0.5865	No
93	WEE1	3390070	15186	-0.317	-0.5864	No
94	HIST1H2AH	3710333	15285	-0.348	-0.5895	No
95	E2F3	50162 460180	15296	-0.350	-0.5878	No
96	SLCO3A1	1050408 2370156 6110072	15329	-0.360	-0.5873	No
97	SLC38A1	520465	15529	-0.429	-0.5953	No
98	TBX6	4730139 6840647	15614	-0.462	-0.5969	No
99	CLSPN	2190239 2630687 5550632	15678	-0.483	-0.5973	Yes
100	MSH2	6180273	15689	-0.488	-0.5947	Yes
101	EZH2	6130605 6380524	15735	-0.506	-0.5939	Yes
102	CDT1	3780682	15749	-0.514	-0.5914	Yes
103	PHF15	6550066 6860673	15765	-0.521	-0.5889	Yes
104	CDC6	4570296 5360600	15903	-0.578	-0.5926	Yes
105	USP37	2470433	15910	-0.580	-0.5893	Yes
106	MCM7	3290292 5220056	15954	-0.607	-0.5877	Yes
107	CHD2	4070039	15963	-0.611	-0.5843	Yes
108	RAB11B	3990609	15972	-0.614	-0.5808	Yes
109	MCM3	5570068	16006	-0.627	-0.5786	Yes
110	MYH10	2640673	16190	-0.718	-0.5839	Yes
111	DNAJC11	360465 3390215	16193	-0.723	-0.5794	Yes
112	PHF5A	2690519	16239	-0.753	-0.5771	Yes
113	SNRPD1	4480162	16420	-0.847	-0.5815	Yes
114	GMNN	2630148	16617	-0.965	-0.5859	Yes
115	NOLC1	2350195	16652	-0.983	-0.5815	Yes
116	PPP1CC	6380300 2510647	16673	-0.993	-0.5763	Yes
117	AK2	4590458 4760195 6110097	16738	-1.028	-0.5732	Yes
118	SFRS7	2760408	16758	-1.040	-0.5676	Yes
119	UFD1L	870020	16843	-1.092	-0.5652	Yes
120	FANCD2	1850280 6840348	16917	-1.150	-0.5619	Yes
121	E2F1	5360093	17060	-1.284	-0.5614	Yes
122	MCM6	60092 540181 6510110	17090	-1.312	-0.5546	Yes
123	SUMO1	1990364 2760338 6380195	17158	-1.382	-0.5495	Yes
124	HNRPA1	4670398 5050687	17220	-1.449	-0.5435	Yes
125	ILF3	940722 3190647 6520110	17224	-1.453	-0.5345	Yes
126	NCL	2360463 4540279	17306	-1.541	-0.5291	Yes
127	CDC25A	3800184	17420	-1.670	-0.5246	Yes
128	STMN1	1990717	17470	-1.733	-0.5162	Yes
129	POLE4	6860097	17513	-1.773	-0.5072	Yes
130	ACO2	4230600	17559	-1.827	-0.4980	Yes
131	PRPS1	6350129	17567	-1.834	-0.4867	Yes
132	ALDH6A1	1770746	17581	-1.852	-0.4756	Yes
133	H2AFZ	1470168	17943	-2.360	-0.4802	Yes
134	HTF9C	3190048 4120132	18033	-2.513	-0.4690	Yes
135	POLD3	6400278	18117	-2.715	-0.4562	Yes
136	DNMT1	2260097	18211	-2.929	-0.4427	Yes
137	PCNA	940754	18279	-3.090	-0.4266	Yes
138	NASP	2260139 2940369 5130707	18304	-3.185	-0.4077	Yes
139	SOAT1	1190019	18328	-3.267	-0.3881	Yes
140	DCK	6900411	18333	-3.283	-0.3675	Yes
141	MCM4	2760673 5420711	18391	-3.505	-0.3483	Yes
142	PHC1	520195	18445	-3.750	-0.3273	Yes
143	BRMS1L	6110609	18462	-3.813	-0.3039	Yes
144	KPNB1	1690138	18464	-3.826	-0.2796	Yes
145	RBL1	3130372	18465	-3.829	-0.2553	Yes
146	CDCA7	3060097	18498	-4.044	-0.2313	Yes
147	EED	2320373	18506	-4.095	-0.2056	Yes
148	ZCCHC8	2260332 2350487	18511	-4.140	-0.1795	Yes
149	TMPO	4050494	18542	-4.448	-0.1528	Yes
150	UGCGL1	4230072	18553	-4.528	-0.1246	Yes
151	CTCF	5340017	18555	-4.586	-0.0955	Yes
152	SFRS1	2360440	18577	-4.846	-0.0658	Yes
153	PPM1D	1690193	18592	-5.188	-0.0335	Yes
154	GSPT1	5420050	18598	-5.469	0.0010	Yes