Details for gene set V$E12

Table: GSEA Results Summary

Dataset	Set_03_absentNotch_versus_truncNotch.phenotype_absentNotch_versus_truncNotch.cls #truncNotch_versus_absentNotch
Phenotype	phenotype_absentNotch_versus_truncNotch.cls#truncNotch_versus_absentNotch
Upregulated in class	truncNotch
GeneSet	V$E12_Q6
Enrichment Score (ES)	0.44265598
Normalized Enrichment Score (NES)	1.2915655
Nominal p-value	0.026755853
FDR q-value	0.99400496
FWER p-Value	1.0

Table: GSEA details [plain text format]
	PROBE	DESCRIPTION (from dataset)	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	HMGA1	6580408	64	4.491	0.0352	Yes
2	HEYL	5860528	73	4.355	0.0723	Yes
3	AIG1	2450091	90	4.174	0.1074	Yes
4	PTK2B	4730411	216	3.448	0.1304	Yes
5	ENO3	5270136	264	3.305	0.1563	Yes
6	ELOVL1	2450019 4760138 5340685	268	3.294	0.1845	Yes
7	GFRA1	3610152	436	2.845	0.2000	Yes
8	ARID5A	2450133	489	2.734	0.2207	Yes
9	DEF6	840593	554	2.636	0.2400	Yes
10	SLC37A4	6400079	559	2.633	0.2624	Yes
11	PPP1R9B	3130619	599	2.558	0.2824	Yes
12	PPOX	2640678 3850102	660	2.473	0.3004	Yes
13	SELL	1190500	841	2.211	0.3097	Yes
14	SASH1	4070270	893	2.147	0.3255	Yes
15	PSTPIP1	3190156	910	2.121	0.3429	Yes
16	HES6	540411 6550504	950	2.067	0.3586	Yes
17	GNAS	630441 1850373 4050152	1257	1.771	0.3572	Yes
18	SMAD3	6450671	1267	1.764	0.3719	Yes
19	CRELD1	2060253	1321	1.721	0.3839	Yes
20	TTC17	2470440	1526	1.553	0.3862	Yes
21	CKM	1450524	1583	1.513	0.3962	Yes
22	SIPA1	5220687	1613	1.500	0.4076	Yes
23	CENTB1	2120093	1983	1.219	0.3981	Yes
24	RANGAP1	2320593 6650601	2049	1.171	0.4046	Yes
25	TNFAIP1	6940593	2076	1.154	0.4132	Yes
26	CNNM2	2650100	2162	1.096	0.4180	Yes
27	STC2	4920601	2304	1.019	0.4191	Yes
28	ARHGAP24	540278 4540025	2379	0.981	0.4236	Yes
29	LRP10	1580128	2443	0.944	0.4283	Yes
30	IGF2	6510020	2497	0.911	0.4333	Yes
31	POFUT1	1570458	2548	0.877	0.4381	Yes
32	CENTG3	2470079 4610092 5050170	2653	0.825	0.4396	Yes
33	CORO2A	3840605 6620390	2729	0.785	0.4423	Yes
34	TPM3	670600 3170296 5670167 6650471	2876	0.702	0.4404	Yes
35	IGFBP5	2360592	2943	0.674	0.4427	Yes
36	CAMK1D	1660100 2350309	3247	0.557	0.4310	No
37	FGF8	6350504	3474	0.478	0.4229	No
38	PLCB3	4670402	3504	0.469	0.4253	No
39	IGSF8	1580592	3555	0.457	0.4266	No
40	SEMA3F	5420601 6770731	3572	0.452	0.4296	No
41	HOXB7	4540706 4610358	3662	0.426	0.4284	No
42	ACTN3	3140541 6480598	3698	0.418	0.4302	No
43	GJB2	5900609 6200487	3788	0.397	0.4288	No
44	SYT4	5080193	3989	0.355	0.4210	No
45	LRP5	2100397 3170484	4102	0.333	0.4178	No
46	HMGN2	3140091	4113	0.332	0.4201	No
47	EYA3	1580195 6510632	4253	0.309	0.4152	No
48	INVS	4200632 6620528	4311	0.298	0.4147	No
49	PHACTR3	3850435 5900445	4336	0.294	0.4159	No
50	PLEC1	6520292 50500 380075 1570088 2510692 2630497 2680017 2900746 4560497 4850376 6290398 7040471	4342	0.293	0.4182	No
51	TNNC2	3840079	4375	0.287	0.4189	No
52	CDH2	520435 2450451 2760025 6650477	4395	0.285	0.4203	No
53	ITGB4	1740021 3840482	4518	0.265	0.4160	No
54	NOL4	5050446 5360519	5049	0.201	0.3890	No
55	MDGA1	1170139	5276	0.177	0.3783	No
56	CYP26A1	380022 2690600	5361	0.170	0.3752	No
57	BRUNOL4	4490452 5080451	5441	0.164	0.3723	No
58	DNMT3A	4050068 4810717	5504	0.159	0.3703	No
59	PRKAG2	2340100	5527	0.157	0.3705	No
60	GPD1	2480095	5576	0.154	0.3692	No
61	GGN	1410528 4210082 5290170	5736	0.142	0.3618	No
62	COL4A3	5910075	5980	0.125	0.3497	No
63	RASSF2	2480079 5720546	5991	0.124	0.3502	No
64	POU2F3	2030601	6032	0.122	0.3491	No
65	FSCN2	1230039	6192	0.113	0.3415	No
66	CALN1	3610722	6262	0.110	0.3387	No
67	CDH5	5340487	6263	0.110	0.3396	No
68	CALB1	460070	6266	0.110	0.3404	No
69	ROBO3	6550408	6486	0.098	0.3294	No
70	CFL1	2340735	6499	0.097	0.3296	No
71	IRX6	4590025	6535	0.096	0.3285	No
72	NEURL	5390538	6536	0.096	0.3293	No
73	ALDH1A2	2320301	6592	0.093	0.3272	No
74	MTUS1	780348 4920609	6880	0.082	0.3123	No
75	CHST9	4560092	7006	0.077	0.3062	No
76	CCNL2	6520167	7100	0.075	0.3018	No
77	DOC2A	6020121	7240	0.070	0.2949	No
78	NPEPPS	2630731	7313	0.068	0.2915	No
79	GDPD2	7000040	7356	0.066	0.2898	No
80	ODC1	5670168	7414	0.064	0.2873	No
81	SOST	1170195	7430	0.064	0.2870	No
82	DNAJB5	2900215	7520	0.061	0.2827	No
83	ZNF205	6900022	7713	0.057	0.2728	No
84	MYH14	4010017	7821	0.055	0.2675	No
85	NEGR1	1940731 5130170	7990	0.050	0.2588	No
86	FGF11	840292	7997	0.050	0.2589	No
87	EIF2C1	6900551	8005	0.050	0.2590	No
88	RTN4RL2	6450609	8212	0.045	0.2482	No
89	MT3	1450537	8267	0.044	0.2456	No
90	ARHGEF12	3990195	8309	0.043	0.2438	No
91	NR4A1	6290161	8346	0.042	0.2422	No
92	CPZ	70193	8367	0.042	0.2415	No
93	MYOZ3	1990138	8446	0.041	0.2376	No
94	GFAP	2060092	8686	0.035	0.2249	No
95	ANK2	6510546	9109	0.027	0.2023	No
96	TREX2	4920707	9123	0.027	0.2018	No
97	TEAD4	1850239 6380519	9212	0.025	0.1972	No
98	ARVCF	2190537	9315	0.023	0.1919	No
99	GRIA1	1340152 3780750 4920440	9369	0.022	0.1892	No
100	FOXI1	3710095 6620195	9372	0.022	0.1893	No
101	DLL3	4010093	9379	0.022	0.1892	No
102	SFTPC	3290133	9407	0.021	0.1879	No
103	MTSS1	780435 2370114	9419	0.021	0.1875	No
104	KLHL13	6590731	9475	0.020	0.1847	No
105	PTPRJ	4010707	9555	0.019	0.1805	No
106	ANKRD2	6590427	9938	0.012	0.1599	No
107	GPM6B	6220458	9946	0.012	0.1596	No
108	TCF2	870338 5050632	9956	0.012	0.1593	No
109	COL4A4	1050541	10339	0.005	0.1386	No
110	LAMA5	2680722	10718	-0.001	0.1181	No
111	CHRDL1	1580037 6380204	10750	-0.001	0.1164	No
112	PPARA	2060026	10754	-0.001	0.1163	No
113	SOX17	5270551	10945	-0.005	0.1060	No
114	BMP6	2100128	10969	-0.005	0.1048	No
115	NHLH1	6100452	11094	-0.007	0.0981	No
116	ASB14	5860427	11218	-0.009	0.0915	No
117	CPA4	3610100	11357	-0.012	0.0842	No
118	NBL1	2480021	11522	-0.015	0.0754	No
119	TGFB3	1070041	11664	-0.017	0.0679	No
120	NTRK2	6220463	11743	-0.019	0.0638	No
121	AP1S2	780279 4280707	11872	-0.022	0.0571	No
122	GATA2	6590280	11962	-0.024	0.0525	No
123	WTAP	4010176	12064	-0.026	0.0472	No
124	TRIM23	580168 6510672	12319	-0.032	0.0337	No
125	CHRND	840403 2260670	12359	-0.033	0.0319	No
126	DLL1	1770377	12441	-0.035	0.0278	No
127	SLC12A5	1980692	12502	-0.036	0.0248	No
128	HSD11B2	5900053	12830	-0.045	0.0075	No
129	KCNB1	3610035	12940	-0.049	0.0020	No
130	GPR37	2320093	12970	-0.050	0.0009	No
131	PACSIN3	4540369 4540400 5360037 6940129	13171	-0.057	-0.0095	No
132	UNC13B	130735	13197	-0.058	-0.0103	No
133	SORCS2	6350520	13412	-0.066	-0.0214	No
134	RAB26	5910025	13536	-0.073	-0.0274	No
135	SLC24A3	5080707	13598	-0.076	-0.0301	No
136	SIM1	1770332	13727	-0.083	-0.0363	No
137	FYN	2100468 4760520 4850687	13831	-0.091	-0.0411	No
138	WDR20	1240373	13897	-0.095	-0.0438	No
139	RAPGEF4	6100563	13939	-0.098	-0.0452	No
140	CANX	4760402	13972	-0.101	-0.0461	No
141	HR	2690095 6200300	14038	-0.106	-0.0487	No
142	NFATC4	2470735	14059	-0.108	-0.0488	No
143	PCDH15	7000438	14124	-0.114	-0.0513	No
144	CXCL14	840114 6450324	14190	-0.121	-0.0538	No
145	SSH2	360056	14301	-0.133	-0.0586	No
146	USP2	1190292 1240253 4850035	14344	-0.138	-0.0597	No
147	KCNK12	4070072	14361	-0.140	-0.0594	No
148	ITGA6	3830129	14632	-0.181	-0.0724	No
149	HIF3A	2630053 2680102 6450364	14680	-0.189	-0.0734	No
150	DSCAM	1780050 2450731 2810438	14695	-0.193	-0.0725	No
151	PIM2	840136 5720692 7100577	14884	-0.231	-0.0807	No
152	NTRK3	4050687 4070167 4610026 6100484	14912	-0.238	-0.0801	No
153	SCG2	5670438 130671	15074	-0.283	-0.0864	No
154	TNFRSF21	6380100	15335	-0.363	-0.0973	No
155	SORT1	1850242 2320632 3870537	15511	-0.424	-0.1032	No
156	CAMK2A	1740333 1940112 4150292	15526	-0.428	-0.1002	No
157	FUT8	1340068 2340056	15634	-0.470	-0.1020	No
158	RIN1	510593	15763	-0.520	-0.1045	No
159	ADAM12	3390132 4070347	15796	-0.531	-0.1016	No
160	TNFSF13	2650170	15983	-0.616	-0.1064	No
161	GRB7	2100471	16145	-0.695	-0.1091	No
162	PLAGL2	1770148	16346	-0.808	-0.1130	No
163	KCNN3	6520600 6420138	16430	-0.856	-0.1101	No
164	ELMO1	110338 1190451 1580148 1850609 2350706 2370369 2450129 3840113 4150184 4280079 6290066 6380435 6770494 7100180	16641	-0.978	-0.1131	No
165	WNT6	4570364	16778	-1.055	-0.1114	No
166	CORO2B	2340035 4850390	17064	-1.290	-0.1157	No
167	NUP88	2510044 6760180	17159	-1.383	-0.1089	No
168	EGLN1	2480180 3120253 6110195	17177	-1.403	-0.0977	No
169	POLR1D	70082 450750 6040458	17329	-1.565	-0.0924	No
170	MFNG	1770242 4280348	17520	-1.781	-0.0874	No
171	SLC23A2	6660722	17533	-1.795	-0.0726	No
172	RUNX1	3840711	17573	-1.837	-0.0589	No
173	GRB2	6650398	17634	-1.909	-0.0457	No
174	LNX2	3130025	17659	-1.945	-0.0302	No
175	OSR1	1500025	18183	-2.843	-0.0341	No
176	NEDD4L	6380368	18321	-3.241	-0.0136	No
177	RRAGC	5910348	18368	-3.426	0.0134	No