DatasetSet_03_absentNotch_versus_truncNotch.phenotype_absentNotch_versus_truncNotch.cls
#truncNotch_versus_absentNotch
Phenotypephenotype_absentNotch_versus_truncNotch.cls#truncNotch_versus_absentNotch
Upregulated in classtruncNotch
GeneSetV$AP1_Q4
Enrichment Score (ES)0.43273672
Normalized Enrichment Score (NES)1.2526432
Nominal p-value0.055743244
FDR q-value0.96232814
FWER p-Value1.0
Table: GSEA Results Summary



Fig 1: Enrichment plot: V$AP1_Q4   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

PROBEDESCRIPTION
(from dataset)
GENE SYMBOLGENE_TITLERANK IN GENE LISTRANK METRIC SCORERUNNING ESCORE ENRICHMENT
1RPL27A3130451 110195 6840494175.7090.0413Yes
2GNGT2540176504.7020.0744Yes
3ABCB663501381353.8620.0984Yes
4LIMK150800641643.6600.1240Yes
5AKT1S116600482003.5250.1481Yes
6MAPK3580161 47800352363.3900.1713Yes
7CD1511450592 37803093473.0710.1881Yes
8CAPNS139401134432.8270.2038Yes
9ETV51100175822.6030.2156Yes
10LMNA520471 1500075 3190167 42100205942.5650.2340Yes
11PPP1R9B31306195992.5580.2527Yes
12KCNN426801296072.5500.2712Yes
13HDAC340600727772.2960.2790Yes
14CAMKK163703247842.2830.2956Yes
15TBC1D1717804508132.2480.3107Yes
16ROM131306859782.0440.3169Yes
17UBE2C613001711591.8730.3210Yes
18ABHD24850504 684001012701.7610.3281Yes
19TNFRSF12A481025313291.7160.3376Yes
20DCTN2540471 378071714041.6400.3457Yes
21TAGLN2456012114331.6190.3562Yes
22BAG2290032415391.5400.3619Yes
23TGFBR21780711 1980537 655039815641.5250.3719Yes
24UBQLN1110280 730376 2470133 659059416681.4690.3772Yes
25ABHD4676045016871.4620.3870Yes
26CIZ14150128 613048417471.4130.3943Yes
27SYTL151048719331.2520.3935Yes
28PDGFRB645027920451.1740.3961Yes
29ISG20177075021471.1050.3988Yes
30STOML2194048721771.0860.4053Yes
31AP2A213008221781.0860.4133Yes
32FKBP8406001923680.9870.4104Yes
33FHL31090369 265001724030.9680.4157Yes
34BAZ2A73018424180.9580.4220Yes
35DTX24210041 700000824260.9500.4287Yes
36IGFBP6158018124780.9210.4327Yes
37EEF1A11980193 1990195 467073526340.8350.4305No
38SCRN16040025 658001927270.7860.4313No
39MMP19508037728420.7220.4305No
40NFRKB313053830440.6320.4243No
41ADORA2A199068730950.6100.4261No
42MDFI620004132730.5460.4205No
43RTN450725 630647 870097 87018433800.5120.4185No
44DUSP13640015233970.5080.4214No
45BLMH141043834640.4830.4214No
46VIM2043134650.4830.4250No
47EPHA2589005637620.4030.4119No
48CLSTN3235068537940.3960.4132No
49ARRDC4281001938410.3870.4135No
50PTPRR130121 399027339390.3650.4110No
51PAPPA423046339540.3610.4129No
52RB1CC1510494 710007243120.2980.3957No
53IRAK1412059346060.2520.3817No
54APOB48R281007046290.2500.3823No
55NRIP3134037247050.2400.3800No
56HSPB7119044148870.2200.3718No
57STAT5B620002649790.2100.3685No
58AXIN2385013149890.2080.3695No
59CORO1C457039751740.1860.3609No
60PADI3652007252490.1790.3582No
61GSN383016852670.1770.3586No
62HS3ST3B138004053720.1690.3542No
63CCL22638008655910.1530.3435No
64GGN1410528 4210082 529017057360.1420.3367No
65EEF1A22260162 529008658650.1340.3308No
66GPR150257044058890.1310.3305No
67STX17226003760120.1230.3248No
68ELA1339016760230.1220.3252No
69ST18572053760450.1210.3249No
70MAP1A492057661870.1140.3181No
71BMP2662068763570.1040.3097No
72LRRC15394060965400.0960.3005No
73MMP958033865410.0960.3013No
74LRP1B145019365720.0940.3003No
75ESRRB387008266140.0920.2988No
76MMP7178049767000.0890.2948No
77SFN6290301 751060867440.0870.2931No
78PTPRH387007068650.0830.2872No
79IL23A629004468730.0820.2875No
80LIFR3360068 383010269090.0810.2862No
81GPR3297045270070.0770.2815No
82AK5629034870170.0770.2816No
83DNM11660097 534051970870.0750.2784No
84ZIC167011373330.0670.2656No
85FGF121740446 236003774310.0640.2608No
86TRIB1232043576470.0580.2496No
87EIF3S16130368 677004477910.0550.2422No
88FGF1184029279970.0500.2315No
89ELK3460377 1400762 371049781450.0470.2238No
90KBTBD5635002583170.0430.2149No
91TIAL14150048 651060586630.0360.1964No
92LPP166054187260.0340.1933No
93WDFY33610041 4560333 457027387470.0340.1925No
94EYA11450278 522039087810.0330.1909No
95GAB21410280 2340520 428004088010.0330.1901No
96GJB3265004089300.0300.1834No
97PRDM13170347 352030189500.0300.1826No
98PSMD112340538 651005391690.0250.1710No
99MYBPH219071193500.0220.1614No
100PSMA35900047 704016195380.0190.1514No
101ANXA7611044695950.0180.1484No
102S100A5412059297560.0150.1399No
103FBXW11645063297780.0150.1388No
104EDN1177004798670.0130.1342No
105UCHL3124073599190.0120.1315No
106HOXA116980133102530.0070.1135No
107PLAC12350594102910.0060.1115No
108BNIP33140270104170.0040.1048No
109CRYBA25900138104520.0030.1030No
110SHC32690398104810.0030.1015No
111AP2B11450184 2370148 3520139 4850593105050.0030.1002No
112IL1RN2370333105950.0010.0954No
113MAPRE37050504106490.0000.0925No
114TRPV354034110957-0.0050.0759No
115EFNA1384067211083-0.0070.0692No
116DSTN314059211144-0.0080.0660No
117PAX9385051911160-0.0080.0652No
118IL9344033811165-0.0080.0651No
119ZIC4150008211366-0.0120.0543No
120SH3RF2620060011409-0.0130.0521No
121USP13145067011797-0.0200.0313No
122UCN2459037211917-0.0230.0250No
123LAMB3710030111925-0.0230.0248No
124FAP456001912262-0.0300.0068No
125HOXD3645015412268-0.0300.0067No
126GOLGA446030012800-0.045-0.0218No
127PTPRN590057712891-0.048-0.0263No
128XLKD152044113054-0.053-0.0347No
129AKAP1110148 1740735 2260019 700056313064-0.053-0.0348No
130RAD23B219067113382-0.065-0.0515No
131GNAI1456039013389-0.065-0.0513No
132IL638013313663-0.080-0.0656No
133UBE3A1240152 2690438 586060913746-0.084-0.0694No
134CMYA1690063213891-0.095-0.0765No
135AKT31580270 329027813982-0.102-0.0806No
136LAMC2450692 2680041 4200059 467014813987-0.102-0.0801No
137PCDH9210013614245-0.126-0.0931No
138NRAS690057714288-0.132-0.0944No
139USP21190292 1240253 485003514344-0.138-0.0964No
140CREM840156 6380438 6660041 666016814395-0.144-0.0980No
141IBRDC2513004114449-0.152-0.0998No
142LAPTM5555037214586-0.172-0.1059No
143PITPNC1399001714748-0.205-0.1131No
144COL27A1174039014752-0.205-0.1117No
145EVI2B105046514755-0.206-0.1103No
146NEK6336068714798-0.213-0.1110No
147PIM2840136 5720692 710057714884-0.231-0.1139No
148CDKN1A4050088 640070614886-0.231-0.1123No
149RABEP14760427 620046314943-0.247-0.1135No
150BACH129019514954-0.249-0.1122No
151APBA2BP570034114997-0.259-0.1125No
152EIF4E1580403 70133 638021515012-0.264-0.1114No
153CASK2340215 3290576 677021515035-0.271-0.1105No
154ROCK21780035 572002515118-0.295-0.1128No
155TCF73800736 539018115277-0.346-0.1188No
156VDR130156 51043815287-0.348-0.1167No
157PDE4D2470528 666001415290-0.349-0.1143No
158LTBP31190162 2650440 652045115318-0.354-0.1131No
159LRRFIP2670575 730152 659043815327-0.359-0.1109No
160MCART1527005915436-0.397-0.1138No
161SCOC610048 223005315517-0.427-0.1150No
162ABI3174056315578-0.448-0.1149No
163PSMD443006815691-0.488-0.1174No
164RIN151059315763-0.520-0.1174No
165MAP2K184073916129-0.683-0.1321No
166CMAS219012916136-0.688-0.1274No
167APOBEC1461002216329-0.801-0.1319No
168PKN3226053816367-0.816-0.1278No
169IL102340685 2640541 2850403 659028616435-0.859-0.1251No
170POLR3E38015216447-0.869-0.1193No
171LAMC1473002516521-0.908-0.1165No
172SLC16A6169015616751-1.035-0.1213No
173BTK313004416802-1.068-0.1161No
174USP3206033216935-1.162-0.1147No
175RBBP7430113 450450 237030917109-1.334-0.1142No
176TCF123610324 700015617340-1.578-0.1150No
177PDAP1141073517516-1.779-0.1113No
178KCNH2117045117517-1.779-0.0982No
179NEFH63023917555-1.821-0.0867No
180RPA3570013617794-2.144-0.0837No
181CYFIP1569008217952-2.374-0.0747No
182ICK1580746 314002118048-2.543-0.0610No
183XPOT705018418063-2.580-0.0427No
184EIF4G1407044618120-2.717-0.0256No
185TRIM8613044118163-2.806-0.0072No
186SRPK2638034118529-4.2820.0047No
Table: GSEA details [plain text format]



Fig 2: V$AP1_Q4   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet



Fig 3: V$AP1_Q4: Random ES distribution   
Gene set null distribution of ES for V$AP1_Q4