DatasetSet_03_absentNotch_versus_truncNotch.phenotype_absentNotch_versus_truncNotch.cls
#truncNotch_versus_absentNotch
Phenotypephenotype_absentNotch_versus_truncNotch.cls#truncNotch_versus_absentNotch
Upregulated in classabsentNotch
GeneSetATGTTAA,MIR-302C
Enrichment Score (ES)-0.5794088
Normalized Enrichment Score (NES)-1.744282
Nominal p-value0.0
FDR q-value0.0049701887
FWER p-Value0.047
Table: GSEA Results Summary



Fig 1: Enrichment plot: ATGTTAA,MIR-302C   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

PROBEDESCRIPTION
(from dataset)
GENE SYMBOLGENE_TITLERANK IN GENE LISTRANK METRIC SCORERUNNING ESCORE ENRICHMENT
1PARP14780446 64003388042.259-0.0260No
2EHD353604848582.190-0.0119No
3WDTC116905418862.1570.0034No
4UBQLN1110280 730376 2470133 659059416681.469-0.0275No
5ADD34150739 539060017451.415-0.0207No
6SON3120148 5860239 704040318651.303-0.0170No
7SFRS250707 38059319551.237-0.0122No
8RNF138110142 3870129 6020441 640019320281.181-0.0069No
9HNRPA2B11240619 6200161 6200494 698040820701.160-0.0001No
10IMMT870450 428043823540.996-0.0077No
11CSNK1D4280280 4480167 645060025750.866-0.0129No
12GABPA2360017 4780301 485027928310.730-0.0211No
13SPRY1450253 46009332350.561-0.0386No
14PCSK652009732550.553-0.0353No
15SH3D19602052034270.496-0.0407No
16HDHD22850411 694016835320.462-0.0428No
17OTX2119047135660.453-0.0411No
18DAAM1150027335990.442-0.0394No
19SIPA1L2485073136450.431-0.0385No
20MAGI16510500 1990239 467047136690.425-0.0364No
21CPEB2476033836740.423-0.0333No
22ZMYND191570706 686055137680.401-0.0352No
23BCL11A686036939990.352-0.0450No
24ATP2C12630446 652025341210.331-0.0490No
25ZBTB4645044141750.322-0.0493No
26USP12760541 5690438 622067342940.302-0.0534No
27LRRTM4591010044270.279-0.0584No
28SF3B1700063246340.249-0.0676No
29MAK294070646780.243-0.0681No
30HOXB352029247640.234-0.0709No
31GPHN3290195 384012149180.216-0.0775No
32CSMD31660427 194068750100.206-0.0808No
33CREB5232036851200.191-0.0852No
34WNT3236068553260.173-0.0950No
35POU3F2662048453360.172-0.0942No
36MATR31940170 534027853690.169-0.0946No
37ST6GALNAC3407056354680.162-0.0986No
38BTBD31980041 2510577 3190053 420074655770.153-0.1033No
39GAD12360035 314016755790.153-0.1022No
40TPD52670463 461054157430.142-0.1099No
41PHACTR2158015458690.133-0.1156No
42B4GALT5123069259160.129-0.1171No
43SLC30A86040348 684041162850.109-0.1362No
44NPY2R622061263210.106-0.1373No
45BMP2662068763570.104-0.1384No
46FZD4158052066110.093-0.1514No
47TBR1513005368770.082-0.1651No
48LIFR3360068 383010269090.081-0.1662No
49TLL1268031569200.081-0.1661No
50NRP24070400 5860041 665044670110.077-0.1704No
51RHEB676044174370.064-0.1929No
52DAZAP1589056375110.062-0.1964No
53PAK7383016476360.058-0.2027No
54EIF3S16130368 677004477910.055-0.2106No
55ARL4A629009182570.044-0.2355No
56KHDRBS2352071783640.042-0.2409No
57RNF13237002183790.042-0.2413No
58MYO1B77037284430.041-0.2444No
59SOX3457053784570.040-0.2448No
60FMR1505007585940.037-0.2519No
61C1QTNF7297061986980.035-0.2572No
62FOXA1371060987910.033-0.2620No
63KHDRBS3212015488570.032-0.2652No
64GPC4591040888750.031-0.2659No
65UBE2V2421048488960.031-0.2668No
66PTPN387036990930.027-0.2772No
67GABRA2329016792710.024-0.2866No
68DACH12450593 570059294550.020-0.2963No
69EDNRB4280717 640043595000.020-0.2986No
70PTPRE1660286 294009595140.019-0.2991No
71HOXA13312064795940.018-0.3033No
72GABRB3415016497250.016-0.3102No
73MYT1677052497540.015-0.3116No
74CBLN24760132100880.010-0.3296No
75YY16130451100980.010-0.3300No
76ZFPM2460072102700.007-0.3392No
77NUP1537000452104300.004-0.3478No
78SP43850176105220.002-0.3527No
79KCTD86660593105410.002-0.3537No
80LRCH22900162106260.001-0.3582No
81PPARA206002610754-0.001-0.3651No
82ABR610079 1170609 3610195 567005010897-0.004-0.3728No
83MTMR6481052010973-0.005-0.3768No
84NEUROG2542027811188-0.009-0.3883No
85HBEGF203015611224-0.009-0.3902No
86SBF2306031511288-0.010-0.3935No
87USP15610592 352050411380-0.012-0.3983No
88TEAD1247055111592-0.016-0.4097No
89CCNT22100390 415056312267-0.030-0.4460No
90DDX3Y1580278 420051912371-0.033-0.4513No
91ZCCHC16589071112582-0.039-0.4624No
92UNC5D199009112625-0.040-0.4644No
93DNAJB62810309 557045112849-0.046-0.4761No
94GOLPH32370195 698071112917-0.049-0.4793No
95FMN245046312958-0.050-0.4811No
96USP3378004712974-0.050-0.4815No
97UBB481013812983-0.051-0.4816No
98DMRT2263006813157-0.056-0.4905No
99SUV39H21450672 637024213432-0.067-0.5049No
100CYFIP2520577 604030013520-0.072-0.5090No
101SSX2IP461017613572-0.075-0.5112No
102AZIN1345007013674-0.081-0.5161No
103NR3C22480324 640009313771-0.086-0.5206No
104B3GNT5478052813899-0.095-0.5267No
105ZIC338002013960-0.100-0.5292No
106STRN5570706 705033314103-0.112-0.5360No
107ACVR1684067114141-0.115-0.5372No
108PPARGC1A467004014233-0.125-0.5411No
109PCDH9210013614245-0.126-0.5407No
110THRAP1247012114284-0.131-0.5418No
111SNAP913170056 569052014381-0.142-0.5459No
112CREM840156 6380438 6660041 666016814395-0.144-0.5455No
113GPRASP2399054114649-0.184-0.5578No
114NUMB2450735 3800253 635004014665-0.187-0.5571No
115TNFSF11635020414705-0.196-0.5577No
116SENP61340592 473014214791-0.213-0.5607No
117IL13RA1555060914804-0.214-0.5597No
118PCBP1105008814874-0.229-0.5616No
119FGFR24670601 5570402 694037715016-0.265-0.5672No
120PCF11124018015057-0.278-0.5672No
121PLEKHA5665059315060-0.279-0.5652No
122SOX1161027915082-0.284-0.5641No
123ZFP36L12510138 412004815103-0.292-0.5629No
124PDE4D2470528 666001415290-0.349-0.5703No
125NRIP1319003915347-0.369-0.5704No
126FBXL3591014215350-0.371-0.5677No
127PPP5C313004715422-0.394-0.5685No
128FBXO21655007015539-0.432-0.5714No
129SAMD854050015562-0.441-0.5692No
130ZNF319662009115596-0.454-0.5674No
131TTC7B476072515800-0.533-0.5743No
132NFAT52510411 5890195 655015215815-0.540-0.5708No
133DLX136016815974-0.614-0.5746Yes
134ASF1A705002016060-0.651-0.5742Yes
135PANK3306068716087-0.660-0.5705Yes
136PPP1R12A4070066 459016216223-0.748-0.5720Yes
137SFRS53450176 635000816289-0.778-0.5695Yes
138BHLHB2704060316464-0.878-0.5721Yes
139CGGBP1481005316476-0.886-0.5658Yes
140ACACA2490612 268036916594-0.954-0.5647Yes
141EIF4A21170494 1740711 285050416605-0.958-0.5578Yes
142FKBP487003516811-1.074-0.5606Yes
143PPP3R11190041 157048716844-1.092-0.5538Yes
144ATP10A478005016864-1.109-0.5462Yes
145MBNL12640762 710004817040-1.263-0.5459Yes
146ATP6V1B2406052817047-1.268-0.5364Yes
147PTP4A2870154 6040070 6130242 676022417048-1.269-0.5265Yes
148RAI1110377 534067017083-1.304-0.5182Yes
149KIF4A1410465 476007017097-1.317-0.5087Yes
150NFIX245015217270-1.505-0.5063Yes
151SIRT1119073117426-1.676-0.5017Yes
152FBXO33151050417453-1.704-0.4899Yes
153AMMECR1380043517524-1.786-0.4798Yes
154TMEM332340022 394075017544-1.810-0.4668Yes
155FOXP1651043317556-1.822-0.4532Yes
156TOB1415013817744-2.086-0.4471Yes
157PPP2R5E70671 212005617840-2.202-0.4352Yes
158HNRPH11170086 3140546 3290471 6110184 611037317848-2.219-0.4183Yes
159TBL1X640052417890-2.280-0.4028Yes
160SLC35A12940750 329036417934-2.345-0.3869Yes
161ATP6V1A659024217950-2.364-0.3694Yes
162RNF6264003518049-2.544-0.3549Yes
163EPC2247009518091-2.651-0.3366Yes
164DDX3X219002018122-2.725-0.3170Yes
165RNF113990068 508045818437-3.723-0.3051Yes
166RAP1B371013818463-3.825-0.2767Yes
167MAPRE1329003718494-4.031-0.2470Yes
168METAP1352063218495-4.035-0.2157Yes
169SMAD4567051918544-4.465-0.1836Yes
170SPOP45003518556-4.589-0.1485Yes
171ACBD3276017018557-4.615-0.1127Yes
172NFYB185005318567-4.754-0.0762Yes
173H3F3B141030018574-4.822-0.0391Yes
174RAB14686013918595-5.3140.0011Yes
Table: GSEA details [plain text format]



Fig 2: ATGTTAA,MIR-302C   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet



Fig 3: ATGTTAA,MIR-302C: Random ES distribution   
Gene set null distribution of ES for ATGTTAA,MIR-302C