Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List
| Dataset | Set_03_absentNotch_versus_wtNotch.phenotype_absentNotch_versus_wtNotch.cls #absentNotch_versus_wtNotch.phenotype_absentNotch_versus_wtNotch.cls #absentNotch_versus_wtNotch_repos |
| Phenotype | phenotype_absentNotch_versus_wtNotch.cls#absentNotch_versus_wtNotch_repos |
| Upregulated in class | absentNotch |
| GeneSet | TRANSFORMING_GROWTH_FACTOR_BETA_RECEPTOR_SIGNALING_PATHWAY |
| Enrichment Score (ES) | 0.65078723 |
| Normalized Enrichment Score (NES) | 1.570657 |
| Nominal p-value | 0.0055452865 |
| FDR q-value | 1.0 |
| FWER p-Value | 0.996 |
| PROBE | DESCRIPTION (from dataset) | GENE SYMBOL | GENE_TITLE | RANK IN GENE LIST | RANK METRIC SCORE | RUNNING ES | CORE ENRICHMENT | |
|---|---|---|---|---|---|---|---|---|
| 1 | LEFTY1 | 3290452 | 912 | 1.075 | 0.0668 | Yes | ||
| 2 | SMAD4 | 5670519 | 943 | 1.053 | 0.1787 | Yes | ||
| 3 | CDKN1C | 6520577 | 1066 | 0.999 | 0.2799 | Yes | ||
| 4 | STUB1 | 5860086 | 1100 | 0.985 | 0.3843 | Yes | ||
| 5 | SMAD3 | 6450671 | 1491 | 0.778 | 0.4472 | Yes | ||
| 6 | EID2 | 3130176 | 1559 | 0.751 | 0.5245 | Yes | ||
| 7 | CITED2 | 5670114 5130088 | 2190 | 0.502 | 0.5447 | Yes | ||
| 8 | HPGD | 6770192 | 2724 | 0.355 | 0.5543 | Yes | ||
| 9 | BMPR1A | 2190193 4060603 | 2815 | 0.335 | 0.5856 | Yes | ||
| 10 | ACVR1 | 6840671 | 2962 | 0.301 | 0.6102 | Yes | ||
| 11 | CDKN2B | 6020040 | 3040 | 0.285 | 0.6368 | Yes | ||
| 12 | ZFYVE9 | 6980288 7100017 | 3271 | 0.245 | 0.6508 | Yes | ||
| 13 | MAP3K7 | 6040068 | 4873 | 0.099 | 0.5753 | No | ||
| 14 | SMAD2 | 4200592 | 4981 | 0.094 | 0.5797 | No | ||
| 15 | GDF15 | 4730017 | 5056 | 0.091 | 0.5855 | No | ||
| 16 | LTBP2 | 4850039 | 5221 | 0.084 | 0.5858 | No | ||
| 17 | HIPK2 | 6350647 | 6230 | 0.053 | 0.5372 | No | ||
| 18 | ACVRL1 | 3290600 | 7205 | 0.032 | 0.4883 | No | ||
| 19 | CIDEA | 4560020 | 7819 | 0.022 | 0.4577 | No | ||
| 20 | TGFB1 | 1940162 | 7861 | 0.021 | 0.4578 | No | ||
| 21 | SNX6 | 6200086 | 8226 | 0.016 | 0.4399 | No | ||
| 22 | LEFTY2 | 5670364 | 8270 | 0.015 | 0.4393 | No | ||
| 23 | GDF9 | 2350181 | 9099 | 0.004 | 0.3951 | No | ||
| 24 | TGFBR3 | 5290577 | 9725 | -0.005 | 0.3620 | No | ||
| 25 | SMAD7 | 430377 | 11097 | -0.026 | 0.2910 | No | ||
| 26 | KLF10 | 4850056 | 11576 | -0.034 | 0.2690 | No | ||
| 27 | GDF5 | 510440 | 11841 | -0.039 | 0.2590 | No | ||
| 28 | FMOD | 540577 | 12126 | -0.046 | 0.2487 | No | ||
| 29 | ENG | 4280270 | 12177 | -0.047 | 0.2510 | No | ||
| 30 | GDF10 | 4850082 | 12601 | -0.057 | 0.2344 | No | ||
| 31 | IL17F | 670577 | 12766 | -0.062 | 0.2323 | No | ||
| 32 | FOXH1 | 2060180 | 12910 | -0.067 | 0.2318 | No | ||
| 33 | TGFBR1 | 1400148 4280020 6550711 | 14036 | -0.118 | 0.1840 | No | ||
| 34 | FNTA | 70059 | 16764 | -0.579 | 0.0997 | No |
