Details for gene set REGULATION_OF_TRANSFORMING_GROWTH_FACTOR_BETA_RECEPTOR_SIGNALING

Table: GSEA Results Summary

Dataset	Set_03_absentNotch_versus_wtNotch.phenotype_absentNotch_versus_wtNotch.cls #absentNotch_versus_wtNotch.phenotype_absentNotch_versus_wtNotch.cls #absentNotch_versus_wtNotch_repos
Phenotype	phenotype_absentNotch_versus_wtNotch.cls#absentNotch_versus_wtNotch_repos
Upregulated in class	absentNotch
GeneSet	REGULATION_OF_TRANSFORMING_GROWTH_FACTOR_BETA_RECEPTOR_SIGNALING_PATHWAY
Enrichment Score (ES)	0.76948667
Normalized Enrichment Score (NES)	1.519271
Nominal p-value	0.016574586
FDR q-value	0.9287914
FWER p-Value	1.0

Fig 1: Enrichment plot: REGULATION_OF_TRANSFORMING_GROWTH_FACTOR_BETA_RECEPTOR_SIGNALING_PATHWAY
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

Table: GSEA details [plain text format]
	PROBE	DESCRIPTION (from dataset)	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	SMAD4	5670519	943	1.053	0.1742	Yes
2	CDKN1C	6520577	1066	0.999	0.3809	Yes
3	SMAD3	6450671	1491	0.778	0.5242	Yes
4	EID2	3130176	1559	0.751	0.6809	Yes
5	CITED2	5670114 5130088	2190	0.502	0.7542	Yes
6	CDKN2B	6020040	3040	0.285	0.7695	Yes
7	SMAD2	4200592	4981	0.094	0.6853	No
8	HIPK2	6350647	6230	0.053	0.6295	No
9	CIDEA	4560020	7819	0.022	0.5489	No
10	TGFB1	1940162	7861	0.021	0.5513	No
11	SNX6	6200086	8226	0.016	0.5351	No
12	ENG	4280270	12177	-0.047	0.3328	No
13	IL17F	670577	12766	-0.062	0.3144	No

Fig 2: REGULATION_OF_TRANSFORMING_GROWTH_FACTOR_BETA_RECEPTOR_SIGNALING_PATHWAY
Blue-Pink O' Gram in the Space of the Analyzed GeneSet

Fig 3: REGULATION_OF_TRANSFORMING_GROWTH_FACTOR_BETA_RECEPTOR_SIGNALING_PATHWAY: Random ES distribution
Gene set null distribution of ES for REGULATION_OF_TRANSFORMING_GROWTH_FACTOR_BETA_RECEPTOR_SIGNALING_PATHWAY