Details for gene set IDX_TSA_DN

Table: GSEA Results Summary

Dataset	Set_03_absentNotch_versus_wtNotch.phenotype_absentNotch_versus_wtNotch.cls #absentNotch_versus_wtNotch.phenotype_absentNotch_versus_wtNotch.cls #absentNotch_versus_wtNotch_repos
Phenotype	phenotype_absentNotch_versus_wtNotch.cls#absentNotch_versus_wtNotch_repos
Upregulated in class	absentNotch
GeneSet	IDX_TSA_DN_CLUSTER3
Enrichment Score (ES)	0.67425364
Normalized Enrichment Score (NES)	1.8047886
Nominal p-value	0.0
FDR q-value	0.025853788
FWER p-Value	0.078

Table: GSEA details [plain text format]
	PROBE	DESCRIPTION (from dataset)	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	VCAM1	2900450	14	3.170	0.0947	Yes
2	EIF4B	5390563 5270577	143	2.090	0.1507	Yes
3	IFI30	730309 2940500	159	2.034	0.2112	Yes
4	HEBP1	6100279	214	1.897	0.2654	Yes
5	EXOC4	2470253	227	1.866	0.3210	Yes
6	CDK4	540075 4540600	246	1.803	0.3743	Yes
7	SPP1	2470609	434	1.500	0.4094	Yes
8	AKAP12	1450739	522	1.383	0.4464	Yes
9	ARMCX2	2320167	560	1.353	0.4851	Yes
10	EPHX1	1740136	612	1.303	0.5216	Yes
11	JUP	2510671	702	1.230	0.5538	Yes
12	THBS2	2850136	821	1.148	0.5820	Yes
13	CNN3	6110020	839	1.131	0.6152	Yes
14	NEDD9	1740373 4230053	1244	0.904	0.6206	Yes
15	PHLDA1	2450020	1332	0.856	0.6417	Yes
16	RASSF5	3450193	1581	0.739	0.6506	Yes
17	SPG20	3360202	2044	0.553	0.6423	Yes
18	CITED2	5670114 5130088	2190	0.502	0.6496	Yes
19	SLC8A1	3440717	2239	0.489	0.6618	Yes
20	CYR61	1240408 5290026 4120452 6550008	2276	0.480	0.6743	Yes
21	RASA4	110296 4200114	2649	0.373	0.6654	No
22	CSF1	3120400	2773	0.344	0.6691	No
23	CDKN2B	6020040	3040	0.285	0.6634	No
24	KIFAP3	3800524 4590082 6940075	3060	0.282	0.6708	No
25	PLK2	6450152	3187	0.259	0.6718	No
26	CEBPD	3360176	3336	0.234	0.6709	No
27	TPD52L1	4590711 5570575	3514	0.210	0.6677	No
28	NME4	3140736 5900446	3544	0.206	0.6723	No
29	DDEF1	1170411 4070465	3659	0.193	0.6720	No
30	CSRP1	2810403	3784	0.177	0.6706	No
31	KLF4	1850022 3830239 5570750	3893	0.167	0.6698	No
32	CNN2	2230433 5270446	4517	0.119	0.6398	No
33	PLAT	6860128	5082	0.090	0.6121	No
34	PRKCD	770592	5186	0.086	0.6091	No
35	STXBP3	780706	5468	0.075	0.5962	No
36	FADS1	5270537	5983	0.059	0.5703	No
37	ROCK2	1780035 5720025	6157	0.054	0.5626	No
38	DDAH2	4480551	6558	0.045	0.5424	No
39	ANXA11	6370128	6699	0.042	0.5361	No
40	BCAR1	1340215	6757	0.041	0.5343	No
41	RNF13	2370021	7110	0.034	0.5163	No
42	PLEKHC1	2650066	8075	0.018	0.4649	No
43	SNX6	6200086	8226	0.016	0.4573	No
44	F3	2940180	8715	0.009	0.4312	No
45	RECK	840079	8735	0.009	0.4305	No
46	DNM1	1660097 5340519	9128	0.003	0.4094	No
47	NDRG4	6510685	9446	-0.001	0.3924	No
48	SKAP2	6760500	9699	-0.004	0.3789	No
49	PTGS2	2510301 3170369	9769	-0.005	0.3754	No
50	GEM	5290082	10017	-0.009	0.3623	No
51	ACVR2A	6110647	10043	-0.009	0.3612	No
52	GALK2	2360632	10469	-0.016	0.3388	No
53	GSTT1	5290520	10541	-0.017	0.3355	No
54	PLA2G4A	6380364	10846	-0.021	0.3197	No
55	SFRP2	4850097	11148	-0.026	0.3043	No
56	DOK1	1050279 2680112 5220273	11547	-0.034	0.2839	No
57	FZD2	6480154	12152	-0.046	0.2527	No
58	GPC4	5910408	12593	-0.057	0.2307	No
59	GAS2	1340082	13363	-0.084	0.1918	No
60	TPM1	130673	13951	-0.113	0.1635	No
61	MAOA	1410039 4610324	13985	-0.115	0.1652	No
62	DPP7	4230520	14050	-0.119	0.1654	No
63	CXCL12	580546 4150750 4570068	14067	-0.120	0.1681	No
64	SIRT2	630494	14606	-0.161	0.1439	No
65	LATS2	4480593 6020494	14731	-0.171	0.1424	No
66	CCT3	7100403	15715	-0.305	0.0986	No
67	CDKN2A	4670215 4760047	15723	-0.307	0.1074	No
68	PSCD3	730301	15798	-0.321	0.1131	No
69	MAGED2	1170142	16218	-0.413	0.1030	No
70	GGTA1	1570292	17462	-0.873	0.0622	No