Details for gene set RNA

Table: GSEA Results Summary

Dataset	Set_03_absentNotch_versus_truncNotch.phenotype_absentNotch_versus_truncNotch.cls #absentNotch_versus_truncNotch.phenotype_absentNotch_versus_truncNotch.cls #absentNotch_versus_truncNotch_repos
Phenotype	phenotype_absentNotch_versus_truncNotch.cls#absentNotch_versus_truncNotch_repos
Upregulated in class	absentNotch
GeneSet	RNA_BINDING
Enrichment Score (ES)	0.51351213
Normalized Enrichment Score (NES)	1.5674562
Nominal p-value	0.0
FDR q-value	0.6185339
FWER p-Value	0.991

Table: GSEA details [plain text format]
	PROBE	DESCRIPTION (from dataset)	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	RPP14	7040014	66	4.485	0.0191	Yes
2	RAD51AP1	4050736 6370528	93	4.193	0.0389	Yes
3	MKI67IP	3060132	142	3.881	0.0560	Yes
4	POP4	4560600	161	3.785	0.0741	Yes
5	EIF4G3	670707	185	3.687	0.0916	Yes
6	HNRPAB	540504	266	3.358	0.1042	Yes
7	SFRS2IP	730687 1500373	301	3.224	0.1187	Yes
8	GRSF1	2100184	306	3.204	0.1347	Yes
9	SF3A3	6660603	408	2.919	0.1440	Yes
10	CSTF2	6040463	491	2.727	0.1533	Yes
11	XPOT	7050184	553	2.580	0.1631	Yes
12	PAIP1	3870576	563	2.557	0.1755	Yes
13	NOL5A	5570139	571	2.530	0.1879	Yes
14	HNRPDL	1050102 1090181 5360471	603	2.480	0.1988	Yes
15	ETF1	6770075	620	2.447	0.2103	Yes
16	TRNT1	870053	679	2.350	0.2191	Yes
17	EIF4A1	1990341 2810300	687	2.341	0.2306	Yes
18	SCYE1	4730736	711	2.303	0.2410	Yes
19	PABPN1	460519	735	2.263	0.2512	Yes
20	KHDRBS1	1240403 6040040	741	2.247	0.2623	Yes
21	SFRS3	770315 4230593	747	2.240	0.2733	Yes
22	HNRPH1	1170086 3140546 3290471 6110184 6110373	768	2.219	0.2835	Yes
23	MRPL3	1170736 5270025	814	2.154	0.2919	Yes
24	KIN	6550014	837	2.124	0.3015	Yes
25	EIF4B	5390563 5270577	844	2.116	0.3119	Yes
26	ILF2	2900253	868	2.089	0.3212	Yes
27	PABPC1	2650180 2690253 6020632 1990270	972	1.920	0.3253	Yes
28	EIF2S2	770095 2810487	1018	1.869	0.3323	Yes
29	IREB2	1570202 2640114	1029	1.859	0.3412	Yes
30	STAU1	2320494	1112	1.767	0.3457	Yes
31	SNUPN	5050131	1243	1.617	0.3468	Yes
32	PURB	5360138	1249	1.611	0.3547	Yes
33	NOL6	2810504 3120050 3840021 6860315	1281	1.575	0.3610	Yes
34	HSP90B1	5670576	1307	1.546	0.3675	Yes
35	NCL	2360463 4540279	1310	1.541	0.3751	Yes
36	CUGBP2	6180121 6840139	1328	1.521	0.3819	Yes
37	RPL7	3840647	1356	1.491	0.3880	Yes
38	ILF3	940722 3190647 6520110	1392	1.453	0.3935	Yes
39	ZNF638	6510112	1474	1.369	0.3960	Yes
40	RPLP2	5290020	1511	1.330	0.4008	Yes
41	RBM3	2360739 5700167	1574	1.265	0.4038	Yes
42	MBNL1	2640762 7100048	1576	1.263	0.4101	Yes
43	SUPV3L1	1170072	1612	1.229	0.4145	Yes
44	RPL31	5690685	1641	1.204	0.4190	Yes
45	RPL30	4810369	1729	1.134	0.4201	Yes
46	STAU2	2810411	1746	1.117	0.4248	Yes
47	CPSF1	6290064	1775	1.090	0.4288	Yes
48	EIF2AK2	870239	1841	1.053	0.4306	Yes
49	RPS25	520139	1842	1.052	0.4360	Yes
50	JAKMIP1	6400020	1851	1.045	0.4408	Yes
51	RPS7	6860113	1867	1.033	0.4452	Yes
52	HNRPA3	6020576 6550433 2630484 5130692	1913	1.004	0.4479	Yes
53	DICER1	540286	1920	1.001	0.4526	Yes
54	RPL22	4070070	1924	1.000	0.4575	Yes
55	RBM5	3520402 5270121	1935	0.998	0.4620	Yes
56	AARS	1570279 2370136	1946	0.992	0.4665	Yes
57	PCBP2	5690048	2057	0.935	0.4653	Yes
58	FUS	4760619	2058	0.935	0.4700	Yes
59	EXOSC7	520538	2059	0.935	0.4747	Yes
60	RPL26	5220592	2088	0.911	0.4778	Yes
61	RNMT	1770500	2112	0.898	0.4811	Yes
62	DUSP11	1500088 4610280	2113	0.897	0.4856	Yes
63	SIP1	2640706	2115	0.896	0.4901	Yes
64	SNRPD1	4480162	2196	0.847	0.4901	Yes
65	EIF4H	610324	2229	0.834	0.4926	Yes
66	CSTF1	4610129	2258	0.811	0.4951	Yes
67	RPL15	6290731	2265	0.809	0.4989	Yes
68	APOBEC1	4610022	2287	0.801	0.5018	Yes
69	HNRPK	1190348 2060411 2570092 6840551	2427	0.717	0.4979	Yes
70	SRP14	5390747	2445	0.710	0.5006	Yes
71	PCBP4	6350722	2474	0.693	0.5026	Yes
72	RPL39	2370446	2533	0.658	0.5027	Yes
73	RPL3L	130167	2534	0.658	0.5061	Yes
74	RPS3A	2470086	2613	0.626	0.5050	Yes
75	RPS21	3120673	2643	0.614	0.5065	Yes
76	PRPF8	1230497 1570600	2714	0.578	0.5057	Yes
77	RPS10	4560673	2725	0.572	0.5080	Yes
78	FBL	5130020	2738	0.566	0.5102	Yes
79	RPS29	580324	2745	0.564	0.5128	Yes
80	RPS26	510139	2810	0.535	0.5120	Yes
81	RNASEH1	3840575	2832	0.527	0.5135	Yes
82	RPL28	6900136	2883	0.505	0.5134	No
83	PRPF3	2510435 2940593 3610113 5390722	3123	0.417	0.5025	No
84	RPL21	110176 3610075 5700563	3130	0.413	0.5043	No
85	FUSIP1	520082 5390114	3143	0.410	0.5057	No
86	NOLA2	4060167	3278	0.365	0.5002	No
87	RAE1	7050121	3294	0.357	0.5012	No
88	ELAVL4	50735 3360086 5220167	3310	0.352	0.5022	No
89	RPLP1	3140292	3322	0.350	0.5034	No
90	MRPL12	3120112	3406	0.326	0.5005	No
91	RPL35	6940070	3410	0.325	0.5020	No
92	ZFP36L1	2510138 4120048	3513	0.292	0.4979	No
93	RPL13	580280	3560	0.278	0.4968	No
94	EIF4E	1580403 70133 6380215	3604	0.264	0.4958	No
95	RPS5	580093	3606	0.263	0.4971	No
96	BARD1	3170348	3612	0.261	0.4982	No
97	RPL4	2940014 5420324	3694	0.241	0.4950	No
98	ZNF346	2650577 3990170 4150348	3726	0.232	0.4945	No
99	NUDT21	1240167	3740	0.230	0.4949	No
100	PCBP1	1050088	3742	0.229	0.4961	No
101	PPP1R8	6290292	3785	0.219	0.4949	No
102	RPS3	1570017 2370170	3843	0.209	0.4928	No
103	TXNL4A	4120286 6510242	3870	0.204	0.4925	No
104	EIF4A3	3440538	3962	0.185	0.4885	No
105	RPS14	430541	4003	0.177	0.4872	No
106	RALY	940427 1740066	4034	0.172	0.4864	No
107	RPS15A	1170180	4086	0.163	0.4845	No
108	LRRFIP1	870259 1050204 2760377	4107	0.160	0.4842	No
109	RPS27	5270242	4242	0.141	0.4776	No
110	PPARGC1A	4670040	4383	0.125	0.4707	No
111	NR0B1	6510750	4542	0.109	0.4626	No
112	TLR7	3140300	4758	0.092	0.4514	No
113	CSTF3	3850156 5570458	4848	0.086	0.4470	No
114	RBM4	2360113 5080750	5028	0.075	0.4377	No
115	RPL3	2060138	5142	0.069	0.4319	No
116	PABPC4	1990170 6760270 5390138	5287	0.063	0.4244	No
117	TROVE2	4850458	5423	0.058	0.4174	No
118	MOV10L1	4050411	5490	0.055	0.4141	No
119	AKAP1	110148 1740735 2260019 7000563	5552	0.053	0.4110	No
120	HNRPH2	2630040 5720671	5895	0.042	0.3927	No
121	SYNCRIP	1690195 3140113 4670279	6115	0.036	0.3809	No
122	RPL24	3870273	6116	0.036	0.3811	No
123	NPM1	4730427	6182	0.034	0.3778	No
124	TIA1	4670373	6641	0.024	0.3530	No
125	HNRPF	670138	6739	0.022	0.3479	No
126	SLBP	6220601	7013	0.016	0.3331	No
127	AUH	5570152	7200	0.013	0.3231	No
128	TLR8	1240092	7433	0.009	0.3105	No
129	SF3B3	3710044	7636	0.005	0.2996	No
130	APOBEC2	1690520	8037	-0.001	0.2779	No
131	TLR9	670093 670706	8179	-0.004	0.2702	No
132	RTCD1	7000041	8365	-0.007	0.2602	No
133	ADARB2	2190170	8634	-0.011	0.2457	No
134	RNASEL	2340133	8861	-0.015	0.2335	No
135	TLR3	6760451	9213	-0.021	0.2146	No
136	DAZL	4050082	9230	-0.022	0.2138	No
137	APTX	3360041 4560167	9520	-0.027	0.1983	No
138	NOL3	4060605 4670121 6620487	9528	-0.027	0.1980	No
139	RPL6	6040735	9877	-0.034	0.1793	No
140	SSB	460286 3140717	9929	-0.035	0.1767	No
141	TIAL1	4150048 6510605	9953	-0.036	0.1756	No
142	FMR1	5050075	10022	-0.037	0.1721	No
143	PTRF	2260204	10101	-0.039	0.1681	No
144	LSM5	4540398	10136	-0.040	0.1664	No
145	RPS8	4120136	10149	-0.040	0.1660	No
146	PPIE	2260079	10649	-0.051	0.1391	No
147	CARS	460441 3140341	11053	-0.060	0.1176	No
148	DAZAP1	5890563	11105	-0.062	0.1151	No
149	RPL41	6940112	11302	-0.068	0.1048	No
150	CUGBP1	450292 510022 7050176 7050215	11467	-0.073	0.0963	No
151	FARS2	5340575	11952	-0.091	0.0704	No
152	NUFIP1	6350241	12178	-0.100	0.0587	No
153	PARN	3840129	12284	-0.106	0.0536	No
154	ATXN1	5550156	12348	-0.109	0.0507	No
155	RPL18	6380181 3870195	12499	-0.117	0.0431	No
156	RNPS1	610736 1090021	12665	-0.127	0.0348	No
157	RPL19	5550592	12786	-0.136	0.0290	No
158	RPS13	1570364	12823	-0.138	0.0277	No
159	HNRPUL1	2120008 4920408 5570180 6370609 6770403	12896	-0.143	0.0245	No
160	ELAVL2	360181	13114	-0.159	0.0136	No
161	ADAT1	510390 6900019	13133	-0.161	0.0134	No
162	BRUNOL4	4490452 5080451	13175	-0.164	0.0120	No
163	RBM9	2510092 6290088	13341	-0.177	0.0039	No
164	TARBP2	60369 380026 4760377	13533	-0.196	-0.0054	No
165	NOL4	5050446 5360519	13567	-0.201	-0.0062	No
166	BCAS2	2340494	13964	-0.247	-0.0265	No
167	SF3B4	110072	14226	-0.286	-0.0392	No
168	ROD1	2060324 3140332	14324	-0.302	-0.0429	No
169	PTBP1	4070736	14401	-0.315	-0.0455	No
170	RPS20	1740092	14431	-0.320	-0.0454	No
171	TEP1	7040735	14738	-0.377	-0.0601	No
172	SRRM1	6110025	15118	-0.469	-0.0784	No
173	RPS2	1340647	15230	-0.510	-0.0818	No
174	RBM6	840279 3840563 4780129 6020446	15243	-0.514	-0.0798	No
175	RBMY1A1	6200053	15622	-0.650	-0.0971	No
176	EXOSC2	6900471	15652	-0.666	-0.0953	No
177	RPL18A	4570619	15839	-0.762	-0.1015	No
178	RPS17	2360528	15901	-0.792	-0.1008	No
179	RPS24	5420377	15924	-0.803	-0.0980	No
180	ZFP36	2030605	15943	-0.812	-0.0948	No
181	SFRS10	6130528 6400438 7040112	16253	-0.992	-0.1066	No
182	FAU	7100465	16346	-1.035	-0.1064	No
183	RPS23	7100594	16519	-1.145	-0.1099	No
184	RPL14	5080471	16590	-1.182	-0.1077	No
185	RPL7A	5420458	16734	-1.294	-0.1089	No
186	SNRP70	4200181	16874	-1.416	-0.1093	No
187	SURF6	3060451	16903	-1.441	-0.1035	No
188	MRPS7	4730270	16955	-1.474	-0.0988	No
189	PSMA1	380059 2760195	17000	-1.498	-0.0937	No
190	RPS6	2060168	17043	-1.521	-0.0882	No
191	ACO1	50114	17117	-1.570	-0.0843	No
192	RPL29	1240075	17298	-1.722	-0.0853	No
193	RPS19	5860066	17353	-1.767	-0.0793	No
194	GEMIN5	3120577	17385	-1.794	-0.0719	No
195	RBPMS	3990494	17423	-1.837	-0.0646	No
196	EIF4E2	2760072 5910609	17628	-2.034	-0.0654	No
197	EIF5A	1500059 5290022 6370026	17720	-2.143	-0.0595	No
198	CIRBP	1850408	17738	-2.167	-0.0494	No
199	DDX19B	430520	17870	-2.337	-0.0447	No
200	RPL38	70040 4060138 6200601	17874	-2.341	-0.0330	No
201	HRB	1660397 6110398	17978	-2.507	-0.0259	No
202	IGF2BP3	2810161 4230338	18072	-2.645	-0.0176	No
203	MRPL23	4070142	18431	-3.584	-0.0189	No
204	RPL27A	3130451 110195 6840494	18599	-5.709	0.0009	No