Details for gene set CELL_CYCLE

Table: GSEA Results Summary

Dataset	Set_03_absentNotch_versus_truncNotch.phenotype_absentNotch_versus_truncNotch.cls #absentNotch_versus_truncNotch.phenotype_absentNotch_versus_truncNotch.cls #absentNotch_versus_truncNotch_repos
Phenotype	phenotype_absentNotch_versus_truncNotch.cls#absentNotch_versus_truncNotch_repos
Upregulated in class	absentNotch
GeneSet	CELL_CYCLE_PROCESS
Enrichment Score (ES)	0.51885146
Normalized Enrichment Score (NES)	1.5538954
Nominal p-value	0.0
FDR q-value	0.61589146
FWER p-Value	0.999

Table: GSEA details [plain text format]
	PROBE	DESCRIPTION (from dataset)	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	GSPT1	5420050	18	5.469	0.0356	Yes
2	ANAPC4	4540338	147	3.854	0.0544	Yes
3	NCAPH	6220435	224	3.506	0.0737	Yes
4	SKP2	360711 380093 4810368	246	3.435	0.0956	Yes
5	MPHOSPH6	5570164	370	3.011	0.1090	Yes
6	KPNA2	3450114	394	2.961	0.1276	Yes
7	PRC1	870092 5890204	406	2.929	0.1466	Yes
8	RB1	5900338	411	2.912	0.1658	Yes
9	MAD2L1	4480725	417	2.886	0.1849	Yes
10	CETN3	3170402	424	2.872	0.2037	Yes
11	AKAP8	4210026	436	2.839	0.2221	Yes
12	TPX2	6420324	442	2.830	0.2408	Yes
13	ZWINT	6940670	591	2.496	0.2494	Yes
14	POLE	6020538	605	2.478	0.2653	Yes
15	KIF23	5570112	668	2.363	0.2777	Yes
16	PPP6C	2450670	671	2.361	0.2934	Yes
17	KHDRBS1	1240403 6040040	741	2.247	0.3047	Yes
18	CD28	1400739 4210093	821	2.145	0.3148	Yes
19	LIG3	2940300	896	2.055	0.3245	Yes
20	ANAPC5	730164 7100685	922	2.010	0.3366	Yes
21	MRE11A	3850601 4670332	947	1.971	0.3485	Yes
22	RAD52	110093	970	1.925	0.3601	Yes
23	CDKN1C	6520577	996	1.891	0.3714	Yes
24	CUL3	1850520	1037	1.848	0.3816	Yes
25	BUB1B	1450288	1041	1.842	0.3938	Yes
26	STMN1	1990717	1146	1.733	0.3997	Yes
27	ZW10	2900735 3520687	1231	1.639	0.4061	Yes
28	CUL1	1990632	1241	1.620	0.4165	Yes
29	NUSAP1	940048 3120435	1271	1.583	0.4255	Yes
30	PTPRC	130402 5290148	1282	1.574	0.4355	Yes
31	CDC16	1940706	1295	1.556	0.4452	Yes
32	CDKN2A	4670215 4760047	1438	1.404	0.4469	Yes
33	GFI1	730180	1550	1.293	0.4495	Yes
34	E2F1	5360093	1556	1.284	0.4578	Yes
35	POLS	5890438	1733	1.130	0.4559	Yes
36	KNTC1	430079	1764	1.098	0.4616	Yes
37	CDK2	130484 2260301 4010088 5050110	1778	1.088	0.4682	Yes
38	TUBE1	2360079 6520685	1877	1.028	0.4697	Yes
39	AURKA	780537	1880	1.026	0.4765	Yes
40	CDC7	4060546 4850041	1905	1.007	0.4819	Yes
41	NOLC1	2350195	1964	0.983	0.4853	Yes
42	NDC80	4120465	1990	0.969	0.4905	Yes
43	NDE1	1580242 3830097	2028	0.950	0.4948	Yes
44	RAD21	1990278	2041	0.945	0.5005	Yes
45	STAG3	3830112	2167	0.869	0.4995	Yes
46	RAD54L	2970041	2168	0.869	0.5053	Yes
47	BRCA2	4280372	2264	0.810	0.5056	Yes
48	MYH10	2640673	2426	0.718	0.5017	Yes
49	PCBP4	6350722	2474	0.693	0.5037	Yes
50	CDK2AP1	2340156	2497	0.677	0.5071	Yes
51	DDX11	6590671	2506	0.672	0.5111	Yes
52	CUL4A	1170088 2320008 2470278	2507	0.671	0.5156	Yes
53	DLG7	3120041	2590	0.639	0.5155	Yes
54	TBRG4	3610239 6370594	2606	0.629	0.5189	Yes
55	CDC6	4570296 5360600	2713	0.578	0.5170	No
56	KIF2C	6940082	2928	0.487	0.5086	No
57	RAD51L3	2230609 2810286 3190008 3390053 4230168	2935	0.484	0.5115	No
58	EGF	5220154	2963	0.474	0.5133	No
59	ACVR1B	3610446 5570195	2980	0.471	0.5155	No
60	CCNA2	5290075	3056	0.440	0.5144	No
61	TUBG1	3140204	3184	0.397	0.5102	No
62	PPP5C	3130047	3194	0.394	0.5123	No
63	RAD17	5220739	3245	0.377	0.5121	No
64	SSSCA1	1240402 780309	3284	0.361	0.5125	No
65	RACGAP1	3990162 6620736	3299	0.354	0.5141	No
66	RAD50	4050184 6770746	3675	0.246	0.4954	No
67	CDKN1A	4050088 6400706	3730	0.231	0.4941	No
68	PIM2	840136 5720692 7100577	3732	0.231	0.4956	No
69	CDK6	4920253	3755	0.226	0.4959	No
70	NEK6	3360687	3818	0.213	0.4939	No
71	TIPIN	1570301 2480113	3903	0.197	0.4907	No
72	CHEK1	50167 1940300	3941	0.188	0.4900	No
73	ABL1	1050593 2030050 4010114	3953	0.186	0.4906	No
74	CDC23	3190593	3954	0.186	0.4919	No
75	SMC4	5910240	4118	0.158	0.4841	No
76	CDKN2B	6020040	4239	0.141	0.4785	No
77	APBB2	5130403	4352	0.129	0.4733	No
78	LATS2	4480593 6020494	4384	0.125	0.4725	No
79	RAD51L1	4010112 5860435	4409	0.122	0.4720	No
80	ACVR1	6840671	4475	0.115	0.4692	No
81	PML	50093 2190435 2450402 3840082	4978	0.078	0.4426	No
82	POLA1	4760541	5556	0.053	0.4117	No
83	TTK	3800129	5743	0.047	0.4019	No
84	CLIP1	2850162 6770397	5800	0.045	0.3992	No
85	CDC25C	2570673 4760161 6520707	6003	0.040	0.3885	No
86	SPO11	540288 4780239	6065	0.038	0.3854	No
87	NPM1	4730427	6182	0.034	0.3794	No
88	CENPF	5050088	6564	0.026	0.3589	No
89	PAM	5290528	6683	0.023	0.3527	No
90	MSH4	3940068	6757	0.021	0.3488	No
91	HSPA2	6420592	6832	0.020	0.3450	No
92	CUL5	450142	6866	0.019	0.3433	No
93	DCTN3	6840131	7367	0.010	0.3163	No
94	TGFA	1570332	7388	0.009	0.3153	No
95	EPGN	6980450	7462	0.008	0.3114	No
96	DMC1	450341	7875	0.001	0.2890	No
97	CCNA1	6290113	7918	0.000	0.2868	No
98	KIF11	5390139	7948	-0.000	0.2852	No
99	FBXO5	2630551	8235	-0.005	0.2697	No
100	NPM2	6040139	9601	-0.028	0.1960	No
101	RAN	2260446 4590647	9637	-0.029	0.1943	No
102	SYCP1	2570010	9755	-0.032	0.1881	No
103	KIF22	1190368	9789	-0.032	0.1866	No
104	TPD52L1	4590711 5570575	9902	-0.035	0.1807	No
105	ATM	3610110 4050524	10515	-0.048	0.1479	No
106	NEK2	2120520	10547	-0.049	0.1465	No
107	RAD1	4200551	10569	-0.049	0.1457	No
108	CENPE	2850022	10578	-0.049	0.1456	No
109	CIT	2370601	10658	-0.051	0.1417	No
110	EREG	50519 4920129	11287	-0.067	0.1081	No
111	KIF15	610731 4070731 6520014	11317	-0.068	0.1070	No
112	ANAPC10	870086 1170037 2260129	11439	-0.072	0.1009	No
113	CDKN3	110520	11558	-0.076	0.0950	No
114	CETN1	6020056	11690	-0.081	0.0885	No
115	TIMELESS	3710315	11724	-0.082	0.0872	No
116	RAD51	6110450 6980280	12021	-0.093	0.0718	No
117	NBN	730538 2470619 4780594	12073	-0.095	0.0697	No
118	KATNA1	6290048	12122	-0.098	0.0678	No
119	TTN	2320161 4670056 6550026	12124	-0.098	0.0684	No
120	PIN1	2970408	12605	-0.123	0.0432	No
121	PLK1	1780369 2640121	12890	-0.143	0.0287	No
122	RCC1	2480358	12929	-0.146	0.0277	No
123	GFI1B	4570131	12974	-0.149	0.0263	No
124	SUGT1	1690670	13218	-0.167	0.0142	No
125	ANAPC11	1780601	13373	-0.179	0.0071	No
126	BUB1	5390270	13543	-0.197	-0.0008	No
127	MDM4	4070504 4780008	13562	-0.200	-0.0004	No
128	PAFAH1B1	4230333 6420121 6450066	13670	-0.213	-0.0048	No
129	XRCC2	4920706	13839	-0.232	-0.0123	No
130	CUL2	4200278	14153	-0.274	-0.0274	No
131	CENTD2	60408 2510156 6100494	14505	-0.332	-0.0442	No
132	TOP3A	7000435	14683	-0.366	-0.0514	No
133	ANLN	1780113 2470537 6840047	14839	-0.399	-0.0571	No
134	CDCA5	5670131	14899	-0.414	-0.0575	No
135	SMC3	870546 1400411 5700039 6450577	14995	-0.436	-0.0598	No
136	CDKN2C	5050750 5130148	15096	-0.464	-0.0621	No
137	USH1C	1570372 4230364	15107	-0.468	-0.0595	No
138	APBB1	2690338	15164	-0.486	-0.0593	No
139	BOLL	6100743	15200	-0.500	-0.0578	No
140	TGFB1	1940162	15204	-0.500	-0.0547	No
141	DUSP13	6400152	15219	-0.508	-0.0520	No
142	CDKN1B	3800025 6450044	15233	-0.512	-0.0493	No
143	BIRC5	110408 580014 1770632	15518	-0.608	-0.0606	No
144	CHFR	3390050 6450300 6450736	16102	-0.901	-0.0862	No
145	NUMA1	6520576	16107	-0.904	-0.0804	No
146	SMC1A	3060600 5700148 5890113 6370154	16276	-1.001	-0.0828	No
147	TARDBP	870390 2350093	16405	-1.070	-0.0826	No
148	MAP3K11	7000039	16729	-1.287	-0.0915	No
149	CDKN2D	6040035	16870	-1.413	-0.0896	No
150	DCTN2	540471 3780717	17212	-1.640	-0.0971	No
151	UBE2C	6130017	17457	-1.873	-0.0978	No
152	POLD1	4830026	17474	-1.881	-0.0861	No
153	CDK4	540075 4540600	17551	-1.953	-0.0772	No
154	PRMT5	2760180 4590072	17722	-2.145	-0.0720	No
155	MAD2L2	1240358	17792	-2.237	-0.0608	No
156	CHMP1A	5550441	17809	-2.253	-0.0466	No
157	CDK10	60164 1190717 3130128 3990044	17940	-2.453	-0.0373	No
158	CDC25B	6940102	18270	-3.071	-0.0346	No
159	MSH5	1340019 4730333	18322	-3.221	-0.0158	No
160	BCAT1	3290128 4050408	18570	-4.735	0.0025	No