Details for gene set V$USF

Table: GSEA Results Summary

Dataset	Set_03_absentNotch_versus_truncNotch.phenotype_absentNotch_versus_truncNotch.cls #absentNotch_versus_truncNotch.phenotype_absentNotch_versus_truncNotch.cls #absentNotch_versus_truncNotch_repos
Phenotype	phenotype_absentNotch_versus_truncNotch.cls#absentNotch_versus_truncNotch_repos
Upregulated in class	absentNotch
GeneSet	V$USF_01
Enrichment Score (ES)	0.5777791
Normalized Enrichment Score (NES)	1.7434102
Nominal p-value	0.0
FDR q-value	0.0064039193
FWER p-Value	0.047

Table: GSEA details [plain text format]
	PROBE	DESCRIPTION (from dataset)	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	UBE4B	780008 3610154	4	6.192	0.0398	Yes
2	CD164	3830594	68	4.479	0.0654	Yes
3	PTMA	5570148	170	3.752	0.0841	Yes
4	DCTN4	3390010 5550170	196	3.620	0.1062	Yes
5	KBTBD2	2320014	212	3.580	0.1285	Yes
6	TOPORS	4060592	227	3.500	0.1504	Yes
7	GNA13	4590102	245	3.438	0.1717	Yes
8	HPS3	6650348	342	3.080	0.1864	Yes
9	BRD2	1450300 5340484 6100605	396	2.955	0.2026	Yes
10	RPA1	360452	466	2.775	0.2168	Yes
11	DDX3X	2190020	494	2.725	0.2330	Yes
12	EIF4G1	4070446	496	2.717	0.2505	Yes
13	GSK3B	5360348	510	2.696	0.2672	Yes
14	AATF	5220575	542	2.600	0.2823	Yes
15	IGF2R	1570402	544	2.593	0.2991	Yes
16	MORF4L2	6450133	566	2.548	0.3144	Yes
17	HTF9C	3190048 4120132	583	2.513	0.3298	Yes
18	COMMD3	2510259	626	2.440	0.3433	Yes
19	U2AF2	450600 4670128 5420292	644	2.405	0.3579	Yes
20	ATP6V1A	6590242	666	2.364	0.3720	Yes
21	PPM1A	1170301 5900273	678	2.352	0.3867	Yes
22	LAMP1	2470524	749	2.240	0.3973	Yes
23	TIMM8A	110279	827	2.135	0.4070	Yes
24	EIF4B	5390563 5270577	844	2.116	0.4198	Yes
25	AKAP12	1450739	845	2.116	0.4335	Yes
26	CCAR1	3190092	866	2.089	0.4459	Yes
27	ALDH6A1	1770746	1035	1.852	0.4488	Yes
28	PRPS1	6350129	1049	1.834	0.4599	Yes
29	ZCCHC7	6510592	1110	1.769	0.4681	Yes
30	UTX	2900017 6770452	1130	1.741	0.4783	Yes
31	STMN1	1990717	1146	1.733	0.4887	Yes
32	NUDC	4780025	1147	1.732	0.4999	Yes
33	SIRT1	1190731	1190	1.676	0.5085	Yes
34	MAX	5220021	1210	1.661	0.5182	Yes
35	STX6	4850750 6770278	1256	1.604	0.5261	Yes
36	PFDN2	4230156	1294	1.560	0.5342	Yes
37	BOK	1170373 5860446	1315	1.535	0.5430	Yes
38	HMOX1	1740687	1380	1.468	0.5490	Yes
39	ILF3	940722 3190647 6520110	1392	1.453	0.5578	Yes
40	ATF4	730441 1740195	1512	1.330	0.5600	Yes
41	HOXB4	540131	1545	1.296	0.5666	Yes
42	TFRC	4050551	1567	1.269	0.5737	Yes
43	ATF7IP	2690176 6770021	1637	1.212	0.5778	Yes
44	HSPBAP1	4060022	1833	1.057	0.5740	No
45	GPX1	4150093	2345	0.768	0.5513	No
46	COMMD8	5890358	2454	0.707	0.5500	No
47	ZFYVE26	6860152	2502	0.675	0.5518	No
48	TNRC15	6760746	2526	0.662	0.5549	No
49	SMYD4	2640403	2527	0.661	0.5591	No
50	SLC31A2	1450577	2563	0.648	0.5614	No
51	UBXD3	5050193	2598	0.634	0.5637	No
52	CSRP2BP	4570717 5550333	2625	0.621	0.5663	No
53	ATIC	4010593 6380463	2636	0.616	0.5697	No
54	RBBP6	2320129	2647	0.613	0.5731	No
55	RAI14	770288 1660075	2663	0.607	0.5763	No
56	PER1	3290315	3070	0.433	0.5570	No
57	RPL13A	2680519 5700142	3186	0.397	0.5534	No
58	NIT1	1230338 3940671	3244	0.377	0.5527	No
59	PICALM	1940280	3454	0.310	0.5434	No
60	SLC38A2	1470242 3800026	3463	0.306	0.5449	No
61	OSGEP	5700239	3553	0.279	0.5419	No
62	TOM1	940398 2190053	3593	0.267	0.5415	No
63	EIF4E	1580403 70133 6380215	3604	0.264	0.5427	No
64	SSR1	5890100	3658	0.251	0.5414	No
65	BRDT	3940102	3705	0.238	0.5405	No
66	DIRC2	2810494	3867	0.205	0.5331	No
67	FEN1	1770541	4062	0.166	0.5236	No
68	SNX5	1570021 6860609	4066	0.166	0.5245	No
69	SUMF1	730050	4069	0.166	0.5255	No
70	DUSP1	6860121	4217	0.144	0.5185	No
71	APEX1	3190519	4297	0.136	0.5151	No
72	HNRPD	4120021	4486	0.114	0.5056	No
73	HOXA7	5910152	4497	0.113	0.5058	No
74	MTCH2	3780603 6620215	4550	0.109	0.5037	No
75	SC5DL	6650390	4585	0.106	0.5025	No
76	JMJD2C	3290341	4660	0.099	0.4991	No
77	FOXD3	6550156	4754	0.092	0.4947	No
78	AKAP1	110148 1740735 2260019 7000563	5552	0.053	0.4518	No
79	RARG	6760136	5614	0.051	0.4488	No
80	NPTX1	3710736	5740	0.047	0.4424	No
81	HNRPH2	2630040 5720671	5895	0.042	0.4343	No
82	GLA	4610364	6072	0.038	0.4250	No
83	POGK	5290315	6154	0.035	0.4208	No
84	NPM1	4730427	6182	0.034	0.4196	No
85	ARPC5	1740411 3450300	6256	0.033	0.4158	No
86	SET	6650286	6363	0.030	0.4103	No
87	ETV1	70735 2940603 5080463	6483	0.027	0.4040	No
88	TRIM37	5270091	6519	0.026	0.4023	No
89	AP1S2	780279 4280707	6744	0.022	0.3903	No
90	PPP1R3C	2640170	6799	0.021	0.3875	No
91	CUL5	450142	6866	0.019	0.3840	No
92	HOXA1	1190524 5420142	6970	0.017	0.3785	No
93	ARMET	5130670	6974	0.017	0.3785	No
94	UBE2B	4780497	7057	0.016	0.3742	No
95	HOXA9	610494 4730040 5130601	7072	0.016	0.3735	No
96	USP15	610592 3520504	7236	0.012	0.3647	No
97	ADAM10	3780156	7346	0.010	0.3589	No
98	XPO1	540707	7492	0.008	0.3511	No
99	NDUFS1	2650253	7498	0.008	0.3509	No
100	KIAA1715	1190551	7501	0.008	0.3508	No
101	UTY	5890441	7584	0.006	0.3464	No
102	HOXA11	6980133	8363	-0.007	0.3042	No
103	HOXD10	6100039	8455	-0.009	0.2994	No
104	PCDHA10	3830725	9179	-0.021	0.2603	No
105	DVL2	6110162	9445	-0.025	0.2461	No
106	CGN	5890139 6370167 6400537	9618	-0.029	0.2369	No
107	SLC36A1	5080242	9719	-0.031	0.2317	No
108	DUSP7	2940309	9723	-0.031	0.2318	No
109	SLC1A7	1990181	9767	-0.032	0.2296	No
110	BDNF	2940128 3520368	9969	-0.036	0.2190	No
111	FMR1	5050075	10022	-0.037	0.2164	No
112	CPT1A	6350093	10027	-0.038	0.2164	No
113	VPS16	430064 3390041 6860301	10065	-0.038	0.2147	No
114	BHLHB3	3450438	10111	-0.039	0.2125	No
115	BMP4	380113	10348	-0.044	0.2000	No
116	SLC26A2	2360278	10366	-0.044	0.1993	No
117	GTF2H1	2570746 2650148	10462	-0.047	0.1945	No
118	HOXC5	1580017	10763	-0.054	0.1786	No
119	SEPT3	3830022 5290079	11012	-0.059	0.1655	No
120	SYT3	6380017	11018	-0.059	0.1656	No
121	GATA5	430465	11133	-0.062	0.1598	No
122	FSHR	610041 7040121	11165	-0.063	0.1585	No
123	ODC1	5670168	11202	-0.064	0.1570	No
124	IRS4	430341 1190450	11205	-0.064	0.1573	No
125	RGL1	1500097 6900450	11658	-0.079	0.1333	No
126	TOM1L2	4810465	11786	-0.084	0.1270	No
127	RAD9A	110300 1940632 3990390 6040014	11799	-0.084	0.1269	No
128	ELAVL3	2850014	11896	-0.088	0.1222	No
129	MCM2	5050139	11994	-0.092	0.1176	No
130	HOXB5	2900538	12437	-0.114	0.0943	No
131	GTF2A1	4120138 4920524 5390110 1230397	12518	-0.118	0.0908	No
132	RNF146	1660735	12609	-0.123	0.0867	No
133	PHC3	4920332	12826	-0.138	0.0759	No
134	GGN	1410528 4210082 5290170	12880	-0.142	0.0739	No
135	RAB3IL1	380685 5420176	12972	-0.149	0.0699	No
136	DNMT3A	4050068 4810717	13112	-0.159	0.0634	No
137	ESR2	6220138	13362	-0.179	0.0511	No
138	MCOLN1	4480563	13727	-0.220	0.0328	No
139	NRIP3	1340372	13911	-0.240	0.0244	No
140	OPRD1	4280138	14039	-0.256	0.0192	No
141	RANBP1	430215 1090180	14100	-0.266	0.0176	No
142	NEUROD1	3060619	14404	-0.316	0.0032	No
143	POLR3C	6940546	14454	-0.324	0.0027	No
144	HMGN2	3140091	14503	-0.332	0.0022	No
145	GABARAP	1450286	14564	-0.343	0.0012	No
146	TESK2	6520524	14570	-0.344	0.0031	No
147	SGOL1	1980075 5220092 6020711	14887	-0.410	-0.0113	No
148	HOXB7	4540706 4610358	14954	-0.426	-0.0122	No
149	NFX1	450504	14969	-0.430	-0.0101	No
150	COPZ1	6940100	14996	-0.436	-0.0087	No
151	SLC12A6	610278 1980035 5340671	15053	-0.454	-0.0088	No
152	TSC1	1850672	15080	-0.461	-0.0073	No
153	EIF3S10	1190079 3840176	15098	-0.465	-0.0052	No
154	EPC1	1570050 5290095 6900193	15244	-0.514	-0.0097	No
155	AKAP10	2630504 5910577	15499	-0.603	-0.0196	No
156	ZNF318	5890091 6130021	15585	-0.636	-0.0201	No
157	VPS33A	780113	15699	-0.683	-0.0218	No
158	CLN3	780368	15783	-0.729	-0.0216	No
159	RBBP4	6650528	15845	-0.764	-0.0200	No
160	RAB24	520601 4540739	16002	-0.846	-0.0229	No
161	TAF6L	1850056	16095	-0.895	-0.0221	No
162	GNB2	2350053	16099	-0.898	-0.0165	No
163	ALG1	2570112	16220	-0.973	-0.0167	No
164	OPRS1	6130128 6290717	16257	-0.994	-0.0122	No
165	DHX35	1230440	16842	-1.388	-0.0349	No
166	ISGF3G	3190131 7100142	16935	-1.463	-0.0305	No
167	TEF	1050050 3120397 4060487	17061	-1.531	-0.0274	No
168	EEF1B2	4850400 6130161	17083	-1.547	-0.0185	No
169	BAX	3830008	17093	-1.555	-0.0089	No
170	MYST3	5270500	17220	-1.648	-0.0051	No
171	GNAS	630441 1850373 4050152	17359	-1.771	-0.0011	No
172	HTATIP	5360739	17473	-1.881	0.0049	No
173	SCYL1	5050717	17504	-1.906	0.0156	No
174	CHD4	5420059 6130338 6380717	17789	-2.234	0.0146	No
175	MRPL27	2060131	17850	-2.304	0.0263	No
176	PLCG2	5720008	17880	-2.352	0.0399	No