Details for gene set V$SRF

Table: GSEA Results Summary

Dataset	Set_03_absentNotch_versus_truncNotch.phenotype_absentNotch_versus_truncNotch.cls #absentNotch_versus_truncNotch.phenotype_absentNotch_versus_truncNotch.cls #absentNotch_versus_truncNotch_repos
Phenotype	phenotype_absentNotch_versus_truncNotch.cls#absentNotch_versus_truncNotch_repos
Upregulated in class	truncNotch
GeneSet	V$SRF_C
Enrichment Score (ES)	-0.4430443
Normalized Enrichment Score (NES)	-1.281766
Nominal p-value	0.030508475
FDR q-value	1.0
FWER p-Value	1.0

Table: GSEA details [plain text format]
	PROBE	DESCRIPTION (from dataset)	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	RRM1	4150433	712	2.297	-0.0145	No
2	AKAP12	1450739	845	2.116	0.0005	No
3	VCL	4120487	901	2.044	0.0189	No
4	FOXP1	6510433	1060	1.822	0.0294	No
5	MAPK14	5290731	1140	1.736	0.0433	No
6	RBBP7	430113 450450 2370309	1507	1.334	0.0375	No
7	HOXB4	540131	1545	1.296	0.0490	No
8	PHF12	870400 3130687	1546	1.295	0.0626	No
9	YWHAZ	1230717	1558	1.283	0.0754	No
10	MBNL1	2640762 7100048	1576	1.263	0.0877	No
11	GADD45G	2510142	1766	1.097	0.0890	No
12	SLC25A4	2360519	1971	0.981	0.0882	No
13	CDC14A	4050132	2143	0.881	0.0882	No
14	PPP1R12A	4070066 4590162	2393	0.748	0.0825	No
15	BCAS3	4050647	2481	0.687	0.0850	No
16	MCAM	5130270 6620577	2597	0.635	0.0854	No
17	EGR2	3800403	3028	0.452	0.0669	No
18	SCOC	610048 2230053	3099	0.427	0.0675	No
19	KCTD15	2810735	3191	0.395	0.0667	No
20	EML4	5700373	3202	0.390	0.0703	No
21	ELAVL4	50735 3360086 5220167	3310	0.352	0.0682	No
22	ROCK2	1780035 5720025	3498	0.295	0.0611	No
23	SPAG7	4560524	3517	0.290	0.0632	No
24	AOC3	6840129	3596	0.266	0.0618	No
25	EGR4	3120750	3703	0.239	0.0585	No
26	KRTCAP2	5220040	3708	0.238	0.0608	No
27	LTBP1	780035 2100746 2760402 3780551 6550184 6860193	3722	0.234	0.0625	No
28	RASD2	3360010	3793	0.218	0.0610	No
29	PFN1	6130132	3881	0.201	0.0584	No
30	FGFRL1	6370047	3907	0.197	0.0591	No
31	ERBB2IP	580253 1090672	3909	0.196	0.0611	No
32	ABL1	1050593 2030050 4010114	3953	0.186	0.0608	No
33	DUSP6	5910286 7100070	4043	0.170	0.0577	No
34	PRKAB2	6980300	4059	0.167	0.0587	No
35	DNAJB4	380195 2760372 3940735	4133	0.157	0.0563	No
36	SLC7A1	2450193 2710241	4280	0.137	0.0499	No
37	STARD13	540722	4364	0.128	0.0467	No
38	MYL7	2480541	4388	0.124	0.0468	No
39	ITGA7	1230739	4433	0.120	0.0456	No
40	MYLK	4010600 7000364	4454	0.118	0.0458	No
41	ACVR1	6840671	4475	0.115	0.0459	No
42	COL1A2	380364	4635	0.102	0.0384	No
43	ITGB6	2810068 4570332	4735	0.094	0.0340	No
44	COL8A1	4590050	4806	0.089	0.0311	No
45	ITGB1BP2	6200129	5009	0.076	0.0210	No
46	TANK	1090020 2060458 2370400	5015	0.076	0.0215	No
47	GPR20	6620601	5179	0.067	0.0134	No
48	MYO1E	3140504	5208	0.066	0.0126	No
49	LMCD1	1740484 2190097	5317	0.062	0.0073	No
50	LIN28	6590672	5515	0.054	-0.0028	No
51	IL17B	6940711	5528	0.054	-0.0028	No
52	ACTR3	1400497	5594	0.052	-0.0058	No
53	CACNA1B	1740010 5360593	5675	0.049	-0.0096	No
54	SLC2A4	540441	5797	0.045	-0.0157	No
55	SYNCRIP	1690195 3140113 4670279	6115	0.036	-0.0325	No
56	DLL1	1770377	6175	0.035	-0.0353	No
57	ACTB	1660736 2030204 2060215 5050047	6268	0.032	-0.0400	No
58	MYH11	7100273	6362	0.030	-0.0447	No
59	FOSB	1940142	6364	0.030	-0.0444	No
60	MITF	380056	6523	0.026	-0.0527	No
61	MYL9	4210750 7050138	6857	0.019	-0.0706	No
62	PLN	3940132	7360	0.010	-0.0977	No
63	MEIS1	1400575	7380	0.010	-0.0986	No
64	CFL2	380239 6200368	7413	0.009	-0.1002	No
65	DSTN	3140592	7472	0.008	-0.1033	No
66	CRK	1230162 4780128	7694	0.004	-0.1152	No
67	NR2F2	3170609 3310577	8001	-0.001	-0.1318	No
68	POPDC2	2030056	8026	-0.001	-0.1331	No
69	HOXD10	6100039	8455	-0.009	-0.1562	No
70	TCF2	870338 5050632	8660	-0.012	-0.1671	No
71	NKX2-2	4150731	9365	-0.024	-0.2050	No
72	KCNK3	2690372	9382	-0.024	-0.2056	No
73	ASPA	3290400	9386	-0.024	-0.2055	No
74	NPAS2	770670	9849	-0.033	-0.2302	No
75	LPP	1660541	9890	-0.034	-0.2320	No
76	TAGLN	6660280	9894	-0.034	-0.2318	No
77	MYO1B	770372	10173	-0.041	-0.2464	No
78	NR4A1	6290161	10270	-0.042	-0.2512	No
79	HOXA5	6840026	10312	-0.043	-0.2530	No
80	FOSL1	430021	10317	-0.043	-0.2527	No
81	DIXDC1	6980435	10381	-0.045	-0.2557	No
82	DMD	1740041 3990332	10389	-0.045	-0.2556	No
83	KCNMB1	4760139	10456	-0.047	-0.2587	No
84	ACTA1	840538	11083	-0.061	-0.2919	No
85	TGFB1I1	2060288 6550450	11173	-0.063	-0.2961	No
86	CALD1	1770129 1940397	11583	-0.077	-0.3174	No
87	HOXA3	3610632 6020358	11631	-0.078	-0.3192	No
88	CNN1	510707	11727	-0.082	-0.3235	No
89	GFPT2	2370129	12032	-0.094	-0.3389	No
90	CFL1	2340735	12117	-0.097	-0.3425	No
91	THBS1	4560494 430288	12132	-0.098	-0.3422	No
92	MAP1A	4920576	12429	-0.114	-0.3571	No
93	HOXB5	2900538	12437	-0.114	-0.3562	No
94	CA3	870687 5890390	12462	-0.116	-0.3563	No
95	IER2	2030008	12496	-0.117	-0.3569	No
96	RASSF2	2480079 5720546	12625	-0.124	-0.3625	No
97	SRD5A2	6840433	12802	-0.136	-0.3706	No
98	CYR61	1240408 5290026 4120452 6550008	12825	-0.138	-0.3704	No
99	GGN	1410528 4210082 5290170	12880	-0.142	-0.3718	No
100	SSH3	6290110 6650497	13000	-0.151	-0.3767	No
101	NR2F1	4120528 360402	13192	-0.165	-0.3853	No
102	MYO18B	7100670	13215	-0.167	-0.3847	No
103	MATR3	1940170 5340278	13247	-0.169	-0.3846	No
104	TADA3L	4210070 5720088 6660333	13438	-0.185	-0.3930	No
105	STAT5B	6200026	13637	-0.210	-0.4015	No
106	EFHD1	4070358	13832	-0.232	-0.4096	No
107	DUSP2	2370184	13886	-0.237	-0.4100	No
108	FOS	1850315	13888	-0.238	-0.4076	No
109	TNNC1	1990575	14097	-0.265	-0.4161	No
110	JPH2	940041 5860026	14143	-0.272	-0.4156	No
111	NKX6-2	2450332 3120333	14208	-0.283	-0.4161	No
112	FOXP2	3520561 4150372 4760524	14381	-0.312	-0.4222	No
113	FOXE3	6900102	14395	-0.314	-0.4196	No
114	LRP5	2100397 3170484	14514	-0.333	-0.4225	No
115	MRGPRF	4780746	14552	-0.341	-0.4210	No
116	TRIM46	3520609 4590010	14684	-0.367	-0.4242	No
117	MRVI1	4810338 4850601 5900441	14869	-0.405	-0.4299	No
118	PLCB3	4670402	15112	-0.469	-0.4381	Yes
119	TITF1	3390554 4540292	15131	-0.473	-0.4342	Yes
120	ACTG2	4780180	15160	-0.485	-0.4306	Yes
121	DVL3	360156 5390075	15245	-0.515	-0.4298	Yes
122	EGR3	6940128	15440	-0.582	-0.4342	Yes
123	CAP1	2650278	15489	-0.600	-0.4305	Yes
124	EMILIN2	70253	15511	-0.606	-0.4253	Yes
125	PADI2	2940092 6420136	15515	-0.607	-0.4191	Yes
126	TPM3	670600 3170296 5670167 6650471	15740	-0.702	-0.4239	Yes
127	POU3F4	870274	15748	-0.707	-0.4169	Yes
128	ARHGAP1	2810010 5270064	15902	-0.793	-0.4168	Yes
129	SRF	70139 2320039	15926	-0.804	-0.4097	Yes
130	TOP1	770471 4060632 6650324	15975	-0.831	-0.4036	Yes
131	PDLIM4	3990358	16098	-0.898	-0.4008	Yes
132	RSU1	4850372	16239	-0.982	-0.3981	Yes
133	TUFT1	540047 2370010	16296	-1.011	-0.3905	Yes
134	USP52	3710215 6380133	16385	-1.057	-0.3842	Yes
135	RGS3	60670 540736 1340180 1500369 3390735 4010131 4610402 6380114	16462	-1.101	-0.3768	Yes
136	GRK6	1500053	16470	-1.105	-0.3656	Yes
137	RHOJ	6660176	16510	-1.139	-0.3558	Yes
138	SIPA1	5220687	17003	-1.500	-0.3667	Yes
139	FHL2	1400008	17004	-1.500	-0.3510	Yes
140	CKM	1450524	17033	-1.513	-0.3367	Yes
141	ARPC4	2900056	17124	-1.577	-0.3250	Yes
142	LCP1	4280397	17133	-1.583	-0.3089	Yes
143	MYL6	60563 6100152	17168	-1.608	-0.2939	Yes
144	RUNDC1	2450037	17177	-1.612	-0.2775	Yes
145	DAPK3	4590121	17202	-1.635	-0.2616	Yes
146	ASB2	4760168	17211	-1.640	-0.2449	Yes
147	TAZ	7100193	17274	-1.703	-0.2304	Yes
148	FLNA	5390193	17445	-1.860	-0.2201	Yes
149	JUNB	4230048	17478	-1.886	-0.2021	Yes
150	CNN2	2230433 5270446	17495	-1.897	-0.1831	Yes
151	EGR1	4610347	17755	-2.187	-0.1743	Yes
152	TLE3	580040 4730121	18007	-2.546	-0.1612	Yes
153	PDLIM7	4780136	18123	-2.731	-0.1388	Yes
154	MUS81	6660184	18155	-2.781	-0.1114	Yes
155	DUSP10	2850673 3360064	18230	-2.963	-0.0844	Yes
156	PNKP	4610685 5720605	18578	-4.908	-0.0518	Yes
157	ANXA6	2190014	18586	-5.135	0.0016	Yes